- using R Under development (unstable) (2026-09-30 r90605)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2)
GNU Fortran (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2)
- running under: Fedora Linux 44 (Server Edition)
- using session charset: UTF-8
* current time: 2026-10-01 01:28:59 UTC
- using option ‘--no-stop-on-test-error’
- checking for file ‘FAfA/DESCRIPTION’ ... OK
- this is package ‘FAfA’ version ‘1.4’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘FAfA’ can be installed ... [8s/16s] OK
See the install log for details.
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [16s/33s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... NONE
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [16s/36s] ERROR
Running ‘spelling.R’
Running ‘testthat.R’ [15s/35s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(FAfA)
>
> test_check("FAfA")
Loading required package: shiny
Loading required namespace: GPArotation
Saving _problems/test-removed-efatools-66.R
Saving _problems/test-removed-efatools-78.R
[ FAIL 2 | WARN 0 | SKIP 2 | PASS 219 ]
══ Skipped tests (2) ═══════════════════════════════════════════════════════════
• On CRAN (2): 'test-golem-recommended.R:72:5',
'test-shinytest2-critical-flow.R:2:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-removed-efatools.R:55:3'): local MAP criteria match the former implementation ──
Expected `result$m_values[, "m_pr_squared"]` to equal `c(...)`.
Differences:
actual | expected
[2] 0.82850586270 | 0.82850586270 [2]
[3] 0.10486367800 | 0.10486367800 [3]
[4] 0.25126330209 | 0.25126330209 [4]
[5] 0.42843565471 - 0.42843565470 [5]
[6] 0.99999996947 - 0.99999996686 [6]
── Failure ('test-removed-efatools.R:67:3'): local MAP criteria match the former implementation ──
Expected `result$m_values[, "m_pr_4rth_power"]` to equal `c(...)`.
Differences:
actual | expected
[1] 10.31157803778 | 10.31157803778 [1]
[2] 31.42205093515 | 31.42205093515 [2]
[3] 0.54074987791 | 0.54074987791 [3]
[4] 2.85561771511 - 2.85561771508 [4]
[5] 6.74765415197 - 6.74765415189 [5]
[6] 42.99999780202 - 42.99999761360 [6]
[ FAIL 2 | WARN 0 | SKIP 2 | PASS 219 ]
Error:
! Test failures.
Execution halted
- checking PDF version of manual ... OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 ERROR