* installing *source* package ‘CovRegRF’ ...
** package ‘CovRegRF’ successfully unpacked and MD5 sums checked
** using staged installation
checking for gcc... gcc-13
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc-13 accepts -g... yes
checking for gcc-13 option to accept ISO C89... none needed
checking for gcc-13 option to support OpenMP... -fopenmp
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C compiler: ‘gcc-13 (GCC) 13.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/CovRegRF/src'
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -I../inst/include/  -I/usr/local/include   -fopenmp -I. -I../inst/include/ -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c R_init_randomForestSRC.c -o R_init_randomForestSRC.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -I../inst/include/  -I/usr/local/include   -fopenmp -I. -I../inst/include/ -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c randomForestSRC.c -o randomForestSRC.o
randomForestSRC.c: In function 'restoreTerminalNodeJIT':
randomForestSRC.c:32907:40: warning: unused variable 'rghtRepMembrSize' [-Wunused-variable]
32907 |   uint repMembrSize, leftRepMembrSize, rghtRepMembrSize;
      |                                        ^~~~~~~~~~~~~~~~
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I. -I../inst/include/  -I/usr/local/include   -fopenmp -I. -I../inst/include/ -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c splitCustom.c -o splitCustom.o
randomForestSRC.c: In function 'regressionXwghtSplitOld':
randomForestSRC.c:17863:26: warning: 'sumRght' may be used uninitialized [-Wmaybe-uninitialized]
17863 |             sumRghtSqr = pow(sumRght, 2.0) / rghtSize;
      |                          ^~~~~~~~~~~~~~~~~
randomForestSRC.c:17761:21: note: 'sumRght' was declared here
17761 |     double sumLeft, sumRght, sumLeftSqr, sumRghtSqr;
      |                     ^~~~~~~
randomForestSRC.c: In function 'regressionXwghtSplitNew':
randomForestSRC.c:18077:26: warning: 'sumRght' may be used uninitialized [-Wmaybe-uninitialized]
18077 |             sumRghtSqr = pow(sumRght, 2.0) / rghtSize;
      |                          ^~~~~~~~~~~~~~~~~
randomForestSRC.c:17963:21: note: 'sumRght' was declared here
17963 |     double sumLeft, sumRght, sumLeftSqr, sumRghtSqr;
      |                     ^~~~~~~
gcc-13 -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -o CovRegRF.so R_init_randomForestSRC.o randomForestSRC.o splitCustom.o -fopenmp -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/CovRegRF/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/CovRegRF/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/CovRegRF/src'
installing to /data/gannet/ripley/R/packages/tests-devel/CovRegRF.Rcheck/00LOCK-CovRegRF/00new/CovRegRF/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (CovRegRF)