* installing *source* package ‘CARlasso’ ...
** package ‘CARlasso’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (GCC) 14.1.0’
using C++11
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/CARlasso/src'
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c CAR-ALASSO-hir.cpp -o CAR-ALASSO-hir.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c CAR-ALASSO.cpp -o CAR-ALASSO.o
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from CAR-ALASSO-hir.cpp:3:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from CAR-ALASSO.cpp:3:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c CAR-LASSO-hir.cpp -o CAR-LASSO-hir.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c CAR-LASSO.cpp -o CAR-LASSO.o
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from CAR-LASSO-hir.cpp:3:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c CAR_ALASSO_helper.cpp -o CAR_ALASSO_helper.o
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from CAR-LASSO.cpp:3:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c CAR_LASSO_helper.cpp -o CAR_LASSO_helper.o
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from CAR_ALASSO_helper.cpp:3:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from CAR_LASSO_helper.cpp:3:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c GIG_helper.cpp -o GIG_helper.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c Probit_helper.cpp -o Probit_helper.o
CAR_ALASSO_helper.cpp: In function 'void update_car_lambda_Omega_adp_helper(arma::vec&, const arma::mat&, const arma::vec&, const arma::vec&)':
CAR_ALASSO_helper.cpp:186:23: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
  186 |     for(int i = 0 ; i < Omega_upper_tri.n_elem ; ++i){
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
CAR_ALASSO_helper.cpp: In function 'void update_car_lambda2_beta_adp_helper(arma::vec&, const arma::vec&, const arma::mat&, const arma::mat&, int, int)':
CAR_ALASSO_helper.cpp:201:23: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
  201 |     for(int i = 0 ; i < lambda2_curr.n_elem ; ++i){
      |                     ~~^~~~~~~~~~~~~~~~~~~~~
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c Truncated_Normal_helper.cpp -o Truncated_Normal_helper.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c ars_helper.cpp -o ars_helper.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c ars_multinomial_helper.cpp -o ars_multinomial_helper.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c ars_pois_helper.cpp -o ars_pois_helper.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c graphical-intercept-ALASSO.cpp -o graphical-intercept-ALASSO.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c graphical-intercept-LASSO.cpp -o graphical-intercept-LASSO.o
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from graphical-intercept-ALASSO.cpp:4:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from graphical-intercept-LASSO.cpp:4:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
graphical-intercept-ALASSO.cpp: In function 'Rcpp::List Intercept_Graphical_ALASSO_Cpp(const arma::mat&, int, int, int, const arma::vec&, const arma::vec&, const arma::vec&, bool)':
graphical-intercept-ALASSO.cpp:150:23: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
  150 |     for(int j = 0 ; j < Omega_upper_tri.n_elem ; ++j){
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
graphical-intercept-ALASSO.cpp: In function 'Rcpp::List Intercept_Graphical_ALASSO_hir_Cpp(const arma::mat&, int, int, int, int, const arma::vec&, const arma::vec&, const arma::vec&, int, int, int, bool)':
graphical-intercept-ALASSO.cpp:413:23: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
  413 |     for(int j = 0 ; j < Omega_upper_tri.n_elem ; ++j){
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c helper.cpp -o helper.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c multireg_wrap.cpp -o multireg_wrap.o
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from multireg_wrap.cpp:4:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c rCARAlasso.cpp -o rCARAlasso.o
g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include   -fopenmp  -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c rCARlasso.cpp -o rCARlasso.o
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from rCARAlasso.cpp:3:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
In file included from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo:26,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
                 from /data/gannet/ripley/R/test-dev/RcppArmadillo/include/RcppArmadillo.h:29,
                 from rCARlasso.cpp:3:
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:326:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
  326 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |                                                                                      ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:331:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
  331 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |                                                                           ^
/data/gannet/ripley/R/test-dev/RcppArmadillo/include/armadillo_bits/config.hpp:334:61: note: '#pragma message: INFO: see the documentation for details'
  334 |   #pragma message ("INFO: see the documentation for details")
      |                                                             ^
g++-14 -std=gnu++11 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o CARlasso.so CAR-ALASSO-hir.o CAR-ALASSO.o CAR-LASSO-hir.o CAR-LASSO.o CAR_ALASSO_helper.o CAR_LASSO_helper.o GIG_helper.o Probit_helper.o RcppExports.o Truncated_Normal_helper.o ars_helper.o ars_multinomial_helper.o ars_pois_helper.o graphical-intercept-ALASSO.o graphical-intercept-LASSO.o helper.o multireg_wrap.o rCARAlasso.o rCARlasso.o -fopenmp -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/CARlasso/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/CARlasso/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/CARlasso/src'
installing to /data/gannet/ripley/R/packages/tests-devel/CARlasso.Rcheck/00LOCK-CARlasso/00new/CARlasso/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (CARlasso)