* installing *source* package ‘BWStest’ ...
** package ‘BWStest’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (GCC) 14.1.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/BWStest/src'
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c bws_init.cpp -o bws_init.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c bws_stat.cpp -o bws_stat.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c murakami_stat.cpp -o murakami_stat.o
In file included from bws_stat.cpp:42:
util.h: In instantiation of 'Rcpp::IntegerVector zip_index_lstar(T, T, int, int) [with T = Rcpp::Vector<14, Rcpp::PreserveStorage>; D = double; bool comp_with_eq = true; Rcpp::IntegerVector = Rcpp::Vector<13>]':
util.h:126:40:   required from 'Rcpp::IntegerVector full_rank(T, T) [with T = Rcpp::Vector<14, Rcpp::PreserveStorage>; D = double; Rcpp::IntegerVector = Rcpp::Vector<13>]'
  126 |         retv = 2 + zip_index_lstar<T, D, true>(sortx, sorty, 0, sortx.length()) +
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bws_stat.cpp:106:52:   required from here
  106 |         IntegerVector G = full_rank<NumericVector, double>(sorty, sortx);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
util.h:72:13: warning: unused variable 'kidx' [-Wunused-variable]
   72 |         int kidx;
      |             ^~~~
murakami_stat.cpp: In function 'Rcpp::NumericVector murakami_pre_B(size_t, size_t, Rcpp::IntegerVector, size_t, int)':
murakami_stat.cpp:93:23: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare]
   93 |         for (jjj=0;jjj<numits;jjj++) {
      |                    ~~~^~~~~~~
murakami_stat.cpp:100:57: warning: comparison of integer expressions of different signedness: 'Rcpp::traits::storage_type<13>::type' {aka 'int'} and 'long unsigned int' [-Wsign-compare]
  100 |                         while ((iii > 0) && (parts(iii) == N - (nx - 1) + iii)) {
      |                                              ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
murakami_stat.cpp:104:35: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare]
  104 |                         for (;iii < (nx - 1);iii++) {
      |                               ~~~~^~~~~~~~~~
murakami_stat.cpp:110:31: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare]
  110 |                 for (iii=1;iii<=nx;iii++) {
      |                            ~~~^~~~
In file included from murakami_stat.cpp:42:
util.h: In instantiation of 'Rcpp::IntegerVector zip_index_lstar(T, T, int, int) [with T = Rcpp::Vector<14, Rcpp::PreserveStorage>; D = double; bool comp_with_eq = true; Rcpp::IntegerVector = Rcpp::Vector<13>]':
util.h:126:40:   required from 'Rcpp::IntegerVector full_rank(T, T) [with T = Rcpp::Vector<14, Rcpp::PreserveStorage>; D = double; Rcpp::IntegerVector = Rcpp::Vector<13>]'
  126 |         retv = 2 + zip_index_lstar<T, D, true>(sortx, sorty, 0, sortx.length()) +
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
murakami_stat.cpp:259:52:   required from here
  259 |         IntegerVector G = full_rank<NumericVector, double>(sorty, sortx);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
util.h:72:13: warning: unused variable 'kidx' [-Wunused-variable]
   72 |         int kidx;
      |             ^~~~
g++-14 -std=gnu++17 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o BWStest.so RcppExports.o bws_init.o bws_stat.o murakami_stat.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/BWStest/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/BWStest/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/BWStest/src'
installing to /data/gannet/ripley/R/packages/tests-devel/BWStest.Rcheck/00LOCK-BWStest/00new/BWStest/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BWStest)