* installing *source* package ‘xsdm’ ... ** this is package ‘xsdm’ version ‘1.0.2’ ** package ‘xsdm’ successfully unpacked and MD5 sums checked ** using staged installation ** libs specified C++17 using C++ compiler: ‘clang version 22.1.8’ using C++17 make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-clang/xsdm/src' clang++-22 -std=gnu++17 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -I'/data/localhost/ripley/R/test-clang/ucminfcpp/include' -isystem /usr/local/clang22me/include -I/usr/local/clang/include -DRCPP_PARALLEL_USE_TBB=1 -Ivendor/xtl -Ivendor/xsimd -Ivendor/xtensor -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c RcppExports.cpp -o RcppExports.o clang++-22 -std=gnu++17 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -I'/data/localhost/ripley/R/test-clang/ucminfcpp/include' -isystem /usr/local/clang22me/include -I/usr/local/clang/include -DRCPP_PARALLEL_USE_TBB=1 -Ivendor/xtl -Ivendor/xsimd -Ivendor/xtensor -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c expm_skew.cpp -o expm_skew.o clang++-22 -std=gnu++17 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -I'/data/localhost/ripley/R/test-clang/ucminfcpp/include' -isystem /usr/local/clang22me/include -I/usr/local/clang/include -DRCPP_PARALLEL_USE_TBB=1 -Ivendor/xtl -Ivendor/xsimd -Ivendor/xtensor -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c like_ltsg.cpp -o like_ltsg.o clang++-22 -std=gnu++17 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -I'/data/localhost/ripley/R/test-clang/ucminfcpp/include' -isystem /usr/local/clang22me/include -I/usr/local/clang/include -DRCPP_PARALLEL_USE_TBB=1 -Ivendor/xtl -Ivendor/xsimd -Ivendor/xtensor -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c log_prob_detect.cpp -o log_prob_detect.o clang++-22 -std=gnu++17 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -I'/data/localhost/ripley/R/test-clang/ucminfcpp/include' -isystem /usr/local/clang22me/include -I/usr/local/clang/include -DRCPP_PARALLEL_USE_TBB=1 -Ivendor/xtl -Ivendor/xsimd -Ivendor/xtensor -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c loglik_bio.cpp -o loglik_bio.o clang++-22 -std=gnu++17 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -I'/data/localhost/ripley/R/test-clang/ucminfcpp/include' -isystem /usr/local/clang22me/include -I/usr/local/clang/include -DRCPP_PARALLEL_USE_TBB=1 -Ivendor/xtl -Ivendor/xsimd -Ivendor/xtensor -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c loglik_math.cpp -o loglik_math.o clang++-22 -std=gnu++17 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -I'/data/localhost/ripley/R/test-clang/ucminfcpp/include' -isystem /usr/local/clang22me/include -I/usr/local/clang/include -DRCPP_PARALLEL_USE_TBB=1 -Ivendor/xtl -Ivendor/xsimd -Ivendor/xtensor -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c loglik_math_xptr.cpp -o loglik_math_xptr.o clang++-22 -std=gnu++17 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -I'/data/localhost/ripley/R/test-clang/ucminfcpp/include' -isystem /usr/local/clang22me/include -I/usr/local/clang/include -DRCPP_PARALLEL_USE_TBB=1 -Ivendor/xtl -Ivendor/xsimd -Ivendor/xtensor -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c loglik_math_xptr_cpp.cpp -o loglik_math_xptr_cpp.o clang++-22 -std=gnu++17 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -I'/data/localhost/ripley/R/test-clang/ucminfcpp/include' -isystem /usr/local/clang22me/include -I/usr/local/clang/include -DRCPP_PARALLEL_USE_TBB=1 -Ivendor/xtl -Ivendor/xsimd -Ivendor/xtensor -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c math_to_bio.cpp -o math_to_bio.o clang++-22 -std=gnu++17 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -I'/data/localhost/ripley/R/test-clang/ucminfcpp/include' -isystem /usr/local/clang22me/include -I/usr/local/clang/include -DRCPP_PARALLEL_USE_TBB=1 -Ivendor/xtl -Ivendor/xsimd -Ivendor/xtensor -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c solve_lsap.cpp -o solve_lsap.o clang++-22 -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang22me/lib -L/usr/local/clang22me/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o xsdm.so RcppExports.o expm_skew.o like_ltsg.o log_prob_detect.o loglik_bio.o loglik_math.o loglik_math_xptr.o loglik_math_xptr_cpp.o math_to_bio.o solve_lsap.o make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-clang/xsdm/src' make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-clang/xsdm/src' make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-clang/xsdm/src' installing to /data/localhost/ripley/R/packages/tests-clang/xsdm.Rcheck/00LOCK-xsdm/00new/xsdm/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (xsdm)