- using R Under development (unstable) (2026-02-16 r89426)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 21.1.8
flang version 21.1.8
- running under: Fedora Linux 42 (Workstation Edition)
- using session charset: UTF-8
* current time: 2026-02-17 09:27:25 UTC
- using option ‘--no-stop-on-test-error’
- checking for file ‘xpose/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘xpose’ version ‘0.4.22’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘xpose’ can be installed ... [26s/71s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking whether startup messages can be suppressed ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [37s/56s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [130s/141s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [119s/122s] ERROR
Running ‘testthat.R’ [119s/121s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(xpose)
Loading required package: ggplot2
Attaching package: 'xpose'
The following object is masked from 'package:stats':
filter
>
> test_check("xpose")
Saving _problems/test-vpc-45.R
[ FAIL 1 | WARN 0 | SKIP 7 | PASS 491 ]
══ Skipped tests (7) ═══════════════════════════════════════════════════════════
• On CRAN (7): 'test-read_nm_files.R:54:3', 'test-read_nm_tables.R:61:3',
'test-read_nm_tables.R:71:3', 'test-vpc.R:50:3', 'test-xpose_data.R:31:3',
'test-xpose_data.R:47:3', 'test-xpose_save.R:14:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-vpc.R:45:3'): vpc_data works properly with xpdb tables ───────
Expected `xpdb_vpc_test$special` to be equivalent to `ctrl_special$special`.
Component "data": Component 1: Length mismatch: comparison on first 20 components
Component "data": Component 1: Component 7: target is numeric, current is character
Component "data": Component 1: Component 8: target is NULL, current is numeric
Component "data": Component 1: Component 11: target is character, current is list
Component "data": Component 1: Component 12: Length mismatch: comparison on first 1 components
Component "data": Component 1: Component 12: Component 1: target is character, current is logical
Component "data": Component 1: Component 14: target is logical, current is character
Component "data": Component 1: Component 15: target is character, current is NULL
Component "data": Component 1: Component 16: target is NULL, current is numeric
...
[ FAIL 1 | WARN 0 | SKIP 7 | PASS 491 ]
Error:
! Test failures.
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [147s/149s] OK
- checking PDF version of manual ... [13s/13s] OK
- checking HTML version of manual ... [15s/15s] OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 ERROR