Check results for 'xgb2sql'

using R Under development (unstable) (2025-12-02 r89085)
using platform: x86_64-pc-linux-gnu
R was compiled by clang version 21.1.6 flang version 21.1.6
running under: Fedora Linux 42 (Workstation Edition)
using session charset: UTF-8
using option ‘--no-stop-on-test-error’
checking for file ‘xgb2sql/DESCRIPTION’ ... OK
checking extension type ... Package
this is package ‘xgb2sql’ version ‘0.1.2’
package encoding: UTF-8
checking package namespace information ... OK
checking package dependencies ... OK
checking if this is a source package ... OK
checking if there is a namespace ... OK
checking for executable files ... OK
checking for hidden files and directories ... OK
checking for portable file names ... OK
checking for sufficient/correct file permissions ... OK
checking whether package ‘xgb2sql’ can be installed ... [4s/16s] OK See the install log for details.
checking installed package size ... OK
checking package directory ... OK
checking ‘build’ directory ... OK
checking DESCRIPTION meta-information ... OK
checking top-level files ... OK
checking for left-over files ... OK
checking index information ... OK
checking package subdirectories ... OK
checking code files for non-ASCII characters ... OK
checking R files for syntax errors ... OK
checking whether the package can be loaded ... OK
checking whether the package can be loaded with stated dependencies ... OK
checking whether the package can be unloaded cleanly ... OK
checking whether the namespace can be loaded with stated dependencies ... OK
checking whether the namespace can be unloaded cleanly ... OK
checking loading without being on the library search path ... OK
checking use of S3 registration ... OK
checking dependencies in R code ... OK
checking S3 generic/method consistency ... OK
checking replacement functions ... OK
checking foreign function calls ... OK
checking R code for possible problems ... [7s/33s] OK
checking Rd files ... OK
checking Rd metadata ... OK
checking Rd line widths ... OK
checking Rd cross-references ... OK
checking for missing documentation entries ... OK
checking for code/documentation mismatches ... OK
checking Rd \usage sections ... OK
checking Rd contents ... OK
checking for unstated dependencies in examples ... OK
checking LazyData ... INFO 'LazyData' is specified without a 'data' directory
checking installed files from ‘inst/doc’ ... OK
checking files in ‘vignettes’ ... OK
checking examples ... [5s/23s] ERROR Running examples in ‘xgb2sql-Ex.R’ failed The error most likely occurred in: > ### Name: booster2sql > ### Title: Transform XGBoost model object to SQL query. > ### Aliases: booster2sql > > ### ** Examples > > library(xgboost) > # load data > df = data.frame(ggplot2::diamonds) > head(df) carat cut color clarity depth table price x y z 1 0.23 Ideal E SI2 61.5 55 326 3.95 3.98 2.43 2 0.21 Premium E SI1 59.8 61 326 3.89 3.84 2.31 3 0.23 Good E VS1 56.9 65 327 4.05 4.07 2.31 4 0.29 Premium I VS2 62.4 58 334 4.20 4.23 2.63 5 0.31 Good J SI2 63.3 58 335 4.34 4.35 2.75 6 0.24 Very Good J VVS2 62.8 57 336 3.94 3.96 2.48 > > # data processing > out <- onehot2sql(df) > x <- out$model.matrix[,colnames(out$model.matrix)!='price'] > y <- out$model.matrix[,colnames(out$model.matrix)=='price'] > > # model training > bst <- xgboost(data = x, + label = y, + max.depth = 3, + eta = .3, + nround = 5, + nthread = 1, + objective = 'reg:linear') Warning in throw_err_or_depr_msg("Passed unrecognized parameters: ", paste(head(names_unrecognized), : Passed unrecognized parameters: max.depth. This warning will become an error in a future version. Warning in throw_err_or_depr_msg("Parameter '", match_old, "' has been renamed to '", : Parameter 'data' has been renamed to 'x'. This warning will become an error in a future version. Warning in throw_err_or_depr_msg("Parameter '", match_old, "' has been renamed to '", : Parameter 'label' has been renamed to 'y'. This warning will become an error in a future version. Warning in throw_err_or_depr_msg("Parameter '", match_old, "' has been renamed to '", : Parameter 'eta' has been renamed to 'learning_rate'. This warning will become an error in a future version. Error in process.y.margin.and.objective(y, base_margin, objective, params) : Got numeric 'y' - supported objectives for this data are: reg:squarederror, reg:squaredlogerror, reg:logistic, reg:pseudohubererror, reg:absoluteerror, reg:quantileerror, count:poisson, reg:gamma, reg:tweedie. Was passed: reg:linear Calls: xgboost -> process.y.margin.and.objective Execution halted
checking for unstated dependencies in vignettes ... OK
checking package vignettes ... OK
checking re-building of vignette outputs ... [8s/31s] ERROR Error(s) in re-building vignettes: --- re-building ‘xgb2sql.Rmd’ using rmarkdown Quitting from xgb2sql.Rmd:221-231 [unnamed-chunk-6] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `process.y.margin.and.objective()`: ! Got numeric 'y' - supported objectives for this data are: reg:squarederror, reg:squaredlogerror, reg:logistic, reg:pseudohubererror, reg:absoluteerror, reg:quantileerror, count:poisson, reg:gamma, reg:tweedie. Was passed: reg:linear --- Backtrace: ▆ 1. └─xgboost::xgboost(...) 2. └─xgboost:::process.y.margin.and.objective(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'xgb2sql.Rmd' failed with diagnostics: Got numeric 'y' - supported objectives for this data are: reg:squarederror, reg:squaredlogerror, reg:logistic, reg:pseudohubererror, reg:absoluteerror, reg:quantileerror, count:poisson, reg:gamma, reg:tweedie. Was passed: reg:linear --- failed re-building ‘xgb2sql.Rmd’ SUMMARY: processing the following file failed: ‘xgb2sql.Rmd’ Error: Vignette re-building failed. Execution halted
checking PDF version of manual ... [7s/26s] OK
checking HTML version of manual ... OK
checking for non-standard things in the check directory ... OK
checking for detritus in the temp directory ... OK
DONE

Status: 2 ERRORs