* installing *source* package ‘wklsr’ ...
** this is package ‘wklsr’ version ‘0.2.5’
** package ‘wklsr’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
*** caught segfault ***
address (nil), cause 'unknown'
Traceback:
1: rethrow_rapi_execute(res@stmt_lst$ref, duckdb_convert_opts_impl(res@connection@convert_opts, arrow = res@arrow))
2: duckdb_execute(res)
3: duckdb_result(connection = conn, stmt_lst = stmt_lst, arrow = arrow)
4: .local(conn, statement, ...)
5: dbSendQuery(conn, statement, ...)
6: dbSendQuery(conn, statement, ...)
7: dbSendStatement(conn, statement, ...)
8: dbSendStatement(conn, statement, ...)
9: dbExecute(.wkls_env$con, "LOAD spatial")
10: dbExecute(.wkls_env$con, "LOAD spatial")
11: .initialize_table()
12: fun(libname, pkgname)
13: doTryCatch(return(expr), name, parentenv, handler)
14: tryCatchOne(expr, names, parentenv, handlers[[1L]])
15: tryCatchList(expr, classes, parentenv, handlers)
16: tryCatch(fun(libname, pkgname), error = identity)
17: runHook(".onLoad", env, package.lib, package)
18: loadNamespace(package, lib.loc)
19: doTryCatch(return(expr), name, parentenv, handler)
20: tryCatchOne(expr, names, parentenv, handlers[[1L]])
21: tryCatchList(expr, classes, parentenv, handlers)
22: tryCatch({ ns <- loadNamespace(package, lib.loc) env <- attachNamespace(ns, pos = pos, deps, exclude, include.only)}, error = function(e) { P <- if (!is.null(cc <- conditionCall(e))) paste(" in", deparse(cc)[1L]) else "" msg <- gettextf("package or namespace load failed for %s%s:\n %s", sQuote(package), P, conditionMessage(e)) if (logical.return && !quietly) message(paste("Error:", msg), domain = NA) else stop(msg, call. = FALSE, domain = NA)})
23: library(pkg_name, lib.loc = lib, character.only = TRUE, logical.return = TRUE)
24: withCallingHandlers(expr, packageStartupMessage = function(c) tryInvokeRestart("muffleMessage"))
25: suppressPackageStartupMessages(library(pkg_name, lib.loc = lib, character.only = TRUE, logical.return = TRUE))
26: doTryCatch(return(expr), name, parentenv, handler)
27: tryCatchOne(expr, names, parentenv, handlers[[1L]])
28: tryCatchList(expr, classes, parentenv, handlers)
29: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
30: try(suppressPackageStartupMessages(library(pkg_name, lib.loc = lib, character.only = TRUE, logical.return = TRUE)))
31: tools:::.test_load_package("wklsr", "/data/gannet/ripley/R/packages/tests-clang/wklsr.Rcheck/00LOCK-wklsr/00new")
An irrecoverable exception occurred. R is aborting now ...
ERROR: loading failed
* removing ‘/data/gannet/ripley/R/packages/tests-clang/wklsr.Rcheck/wklsr’