* installing *source* package ‘ubms’ ...
** package ‘ubms’ successfully unpacked and MD5 sums checked
** using staged installation
DIAGNOSTIC(S) FROM PARSER:
Info: integer division implicitly rounds to integer. Found int division: num_elements(logit_p) / M
 Positive values rounded down, negative values rounded up or down in platform-dependent way.

DIAGNOSTIC(S) FROM PARSER:
Info: integer division implicitly rounds to integer. Found int division: num_elements(logit_p) / M
 Positive values rounded down, negative values rounded up or down in platform-dependent way.

Registered S3 methods overwritten by 'RcppEigen':
  method               from         
  predict.fastLm       RcppArmadillo
  print.fastLm         RcppArmadillo
  summary.fastLm       RcppArmadillo
  print.summary.fastLm RcppArmadillo
Warning messages:
1: In .warning_nowrite(file.path(basename(pkgdir), ...)) :
  'ubms/src/Makevars' already exists.  Not overwritten by rstantools.FALSE
2: In .warning_nowrite(file.path(basename(pkgdir), ...)) :
  'ubms/src/Makevars.win' already exists.  Not overwritten by rstantools.FALSE
** libs
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/ubms/src'


/usr/local/clang15/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"../inst/include" -I"/data/gannet/ripley/R/test-clang/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error  -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/rstan/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang15/include    -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fpic  -O3 -Wall -pedantic -frtti  -c RcppExports.cpp -o RcppExports.o


In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:30:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:1:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Core:540:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:30:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:2:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/LU:47:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:30:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Cholesky:12:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Jacobi:29:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:30:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Cholesky:43:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:30:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/QR:15:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Householder:27:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:30:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/QR:48:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:30:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SVD:48:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:30:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:6:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Geometry:58:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:30:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:7:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Eigenvalues:58:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
      Index count = 0;
            ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:66:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:27:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/OrderingMethods:71:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCholesky:43:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:33:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
  Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
        ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
  Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
        ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:32:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseQR:34:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:33:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:32:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/CholmodSupport:45:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:35:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:39:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/Polynomials:135:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:40:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:44:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:239:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  int count = 0;
      ^
In file included from RcppExports.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:40:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
22 warnings generated.
/usr/local/clang15/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"../inst/include" -I"/data/gannet/ripley/R/test-clang/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error  -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/rstan/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang15/include    -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fpic  -O3 -Wall -pedantic -frtti  -c exp_counts_occu.cpp -o exp_counts_occu.o


exp_counts_occu.cpp:31:7: warning: unused variable 'idx' [-Wunused-variable]
  int idx = 0;
      ^
exp_counts_occu.cpp:76:7: warning: unused variable 'idx' [-Wunused-variable]
  int idx = 0;
      ^
2 warnings generated.
/usr/local/clang15/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"../inst/include" -I"/data/gannet/ripley/R/test-clang/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error  -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/rstan/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang15/include    -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fpic  -O3 -Wall -pedantic -frtti  -c simz.cpp -o simz.o


simz.cpp:31:14: warning: use of bitwise '|' with boolean operands [-Wbitwise-instead-of-logical]
          if(!is_finite(y(m,j)) | !is_finite(p_post(m,j,i))){
             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
                                ||
simz.cpp:31:14: note: cast one or both operands to int to silence this warning
1 warning generated.
/usr/local/clang15/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"../inst/include" -I"/data/gannet/ripley/R/test-clang/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error  -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/rstan/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang15/include    -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fpic  -O3 -Wall -pedantic -frtti  -c stanExports_colext.cc -o stanExports_colext.o


In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:1:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Core:540:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:2:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/LU:47:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Cholesky:12:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Jacobi:29:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Cholesky:43:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/QR:15:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Householder:27:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/QR:48:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SVD:48:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:6:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Geometry:58:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:7:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Eigenvalues:58:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
      Index count = 0;
            ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:66:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:27:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/OrderingMethods:71:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCholesky:43:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:33:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
  Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
        ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
  Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
        ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:32:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseQR:34:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:33:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:32:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/CholmodSupport:45:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:35:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:39:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/Polynomials:135:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:40:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:44:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:239:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  int count = 0;
      ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:40:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:283:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:138:7: warning: unused variable 'n' [-Wunused-variable]
  int n = G.rows();  // number of states
      ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array_wrapper.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/nvp.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/split_free.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:28:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_NOTHROW_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN'
#     define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array_wrapper.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/nvp.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/split_free.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:29:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_CONSTRUCTOR(T)>{};
                                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR'
#     define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible<T>::value)
                                               ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array_wrapper.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/nvp.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/split_free.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:30:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_copy_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_COPY(T)>{};
                                                                                        ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY'
#     define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile<T>::value && !is_reference<T>::value && is_copy_constructible<T>::value)
                                        ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array_wrapper.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/nvp.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/split_free.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:30:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY'
#     define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile<T>::value && !is_reference<T>::value && is_copy_constructible<T>::value)
                                        ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_copy_constructor<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:39:54: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    explicit D(const T& t_) BOOST_NOEXCEPT_IF(boost::has_nothrow_copy_constructor<T>::value) : t(t_) {}          \
                                                     ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array_wrapper.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/nvp.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/split_free.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:29:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_CONSTRUCTOR(T)>{};
                                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR'
#     define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible<T>::value)
                                               ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:69:68: note: in instantiation of template class 'boost::has_nothrow_constructor<unsigned int>' requested here
template <class T> struct has_nothrow_default_constructor : public has_nothrow_constructor<T>{};
                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_default_constructor<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:40:34: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    D() BOOST_NOEXCEPT_IF(boost::has_nothrow_default_constructor<T>::value) : t() {}                             \
                                 ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array_wrapper.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/nvp.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/split_free.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:28:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_NOTHROW_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN'
#     define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_assign<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:42:57: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    D& operator=(const D& rhs) BOOST_NOEXCEPT_IF(boost::has_nothrow_assign<T>::value) {t = rhs.t; return *this;} \
                                                        ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:70:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_destructor.hpp:12:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins]
template <typename T> struct has_trivial_destructor : public integral_constant<bool, BOOST_HAS_TRIVIAL_DESTRUCTOR(T)>{};
                                                                                     ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR'
#     define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T)  && is_destructible<T>::value)
                                              ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:79:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_assign.hpp:29:7: warning: builtin __has_trivial_assign is deprecated; use __is_trivially_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_TRIVIAL_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:193:43: note: expanded from macro 'BOOST_HAS_TRIVIAL_ASSIGN'
#     define BOOST_HAS_TRIVIAL_ASSIGN(T) (__has_trivial_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:80:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins]
   : public integral_constant <bool, ((::boost::is_pod<T>::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{};
                                                                    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR'
#     define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T)
                                              ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:81:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins]
   BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX
   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY'
#     define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference<T>::value)
                                        ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:34:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:131:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:39:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/linear_algebra.hpp:20:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:40:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/unscale.hpp:28:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<bool, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base<bool>' requested here
    BOOST_HASH_SPECIALIZE(bool)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<bool, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:610:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char>' requested here
    BOOST_HASH_SPECIALIZE(char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<signed char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:611:5: note: in instantiation of template class 'boost::hash_detail::hash_base<signed char>' requested here
    BOOST_HASH_SPECIALIZE(signed char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<signed char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned char>' requested here
    BOOST_HASH_SPECIALIZE(unsigned char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<wchar_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:614:5: note: in instantiation of template class 'boost::hash_detail::hash_base<wchar_t>' requested here
    BOOST_HASH_SPECIALIZE(wchar_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<wchar_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char16_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char16_t>' requested here
    BOOST_HASH_SPECIALIZE(char16_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char16_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char32_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char32_t>' requested here
    BOOST_HASH_SPECIALIZE(char32_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char32_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<short, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base<short>' requested here
    BOOST_HASH_SPECIALIZE(short)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<short, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned short, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:623:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned short>' requested here
    BOOST_HASH_SPECIALIZE(unsigned short)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned short, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<int, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base<int>' requested here
    BOOST_HASH_SPECIALIZE(int)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<int, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned int, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned int>' requested here
    BOOST_HASH_SPECIALIZE(unsigned int)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned int, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long>' requested here
    BOOST_HASH_SPECIALIZE(long)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:627:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned long>' requested here
    BOOST_HASH_SPECIALIZE(unsigned long)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<float, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:629:5: note: in instantiation of template class 'boost::hash_detail::hash_base<float>' requested here
    BOOST_HASH_SPECIALIZE(float)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<float, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<double, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base<double>' requested here
    BOOST_HASH_SPECIALIZE(double)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<double, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long double, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:631:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long double>' requested here
    BOOST_HASH_SPECIALIZE(long double)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long double, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::string)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::wstring, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:635:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::wstring>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::wstring)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::wstring, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::u16string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:638:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::u16string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::basic_string<char16_t>)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::u16string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::u32string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:641:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::u32string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::basic_string<char32_t>)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::u32string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long long>' requested here
    BOOST_HASH_SPECIALIZE(boost::long_long_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned long long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned long long>' requested here
    BOOST_HASH_SPECIALIZE(boost::ulong_long_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned long long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:663:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here
    BOOST_HASH_SPECIALIZE(boost::int128_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned __int128, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:664:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned __int128>' requested here
    BOOST_HASH_SPECIALIZE(boost::uint128_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned __int128, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::type_index, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:679:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::type_index>' requested here
    BOOST_HASH_SPECIALIZE(std::type_index)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::type_index, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat/fun/columns_dot_self.hpp:8:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:38:41: warning: all paths through this function will call itself [-Winfinite-recursion]
  inline static double square(double x) { return square(x); }
                                        ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:70:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat/functor/integrate_ode_adams.hpp:5:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat/functor/cvodes_integrator.hpp:126:18: warning: unused variable 'coupled_size' [-Wunused-variable]
    const size_t coupled_size = cvodes_data.coupled_ode_.size();
                 ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
/data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1238:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
    int ret = stan::services::error_codes::CONFIG;
        ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<const std::error_category *, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:692:18: note: in instantiation of template class 'boost::hash_detail::hash_base<const std::error_category *>' requested here
        : public boost::hash_detail::hash_base<T*>
                 ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:420:24: note: in instantiation of template class 'boost::hash<const std::error_category *>' requested here
        boost::hash<T> hasher;
                       ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:551:9: note: in instantiation of function template specialization 'boost::hash_combine<const std::error_category *>' requested here
        hash_combine(seed, &v.category());
        ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<const std::error_category *, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/core.hpp:46:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function]
static void set_zero_all_adjoints() {
            ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/core.hpp:47:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints_nested.hpp:17:13: warning: 'static' function 'set_zero_all_adjoints_nested' declared in header file should be declared 'static inline' [-Wunneeded-internal-declaration]
static void set_zero_all_adjoints_nested() {
            ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:278:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_log.hpp:5:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_lpmf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef]
  using T_partials_vec = typename Eigen::Matrix<T_partials_return, -1, 1>;
        ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:328:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_log.hpp:5:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_lpmf.hpp:52:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef]
  using T_alpha_val = typename std::conditional_t<
        ^
In file included from stanExports_colext.cc:5:
In file included from ./stanExports_colext.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:51:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:27:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef]
    using idx_t = typename index_type<matrix_v>::type;
          ^
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:64:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef]
    using idx_t = typename index_type<matrix_d>::type;
          ^
In file included from stanExports_colext.cc:5:
./stanExports_colext.h:1425:24: warning: unused typedef 'local_scalar_t__' [-Wunused-local-typedef]
        typedef double local_scalar_t__;
                       ^
77 warnings generated.
/usr/local/clang15/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"../inst/include" -I"/data/gannet/ripley/R/test-clang/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error  -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/rstan/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang15/include    -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fpic  -O3 -Wall -pedantic -frtti  -c stanExports_single_season.cc -o stanExports_single_season.o


In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:1:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Core:540:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:2:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/LU:47:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Cholesky:12:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Jacobi:29:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Cholesky:43:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/QR:15:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Householder:27:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/QR:48:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SVD:48:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:6:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Geometry:58:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:7:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Eigenvalues:58:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
      Index count = 0;
            ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:66:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:27:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/OrderingMethods:71:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCholesky:43:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:33:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
  Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
        ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
  Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
        ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:32:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseQR:34:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:33:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:32:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/CholmodSupport:45:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:35:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:39:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/Polynomials:135:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:40:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:44:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:239:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  int count = 0;
      ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:40:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:283:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:138:7: warning: unused variable 'n' [-Wunused-variable]
  int n = G.rows();  // number of states
      ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array_wrapper.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/nvp.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/split_free.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:28:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_NOTHROW_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN'
#     define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array_wrapper.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/nvp.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/split_free.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:29:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_CONSTRUCTOR(T)>{};
                                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR'
#     define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible<T>::value)
                                               ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array_wrapper.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/nvp.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/split_free.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:30:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_copy_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_COPY(T)>{};
                                                                                        ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY'
#     define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile<T>::value && !is_reference<T>::value && is_copy_constructible<T>::value)
                                        ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array_wrapper.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/nvp.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/split_free.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:30:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY'
#     define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile<T>::value && !is_reference<T>::value && is_copy_constructible<T>::value)
                                        ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_copy_constructor<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:39:54: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    explicit D(const T& t_) BOOST_NOEXCEPT_IF(boost::has_nothrow_copy_constructor<T>::value) : t(t_) {}          \
                                                     ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array_wrapper.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/nvp.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/split_free.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:29:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_CONSTRUCTOR(T)>{};
                                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR'
#     define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible<T>::value)
                                               ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:69:68: note: in instantiation of template class 'boost::has_nothrow_constructor<unsigned int>' requested here
template <class T> struct has_nothrow_default_constructor : public has_nothrow_constructor<T>{};
                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_default_constructor<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:40:34: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    D() BOOST_NOEXCEPT_IF(boost::has_nothrow_default_constructor<T>::value) : t() {}                             \
                                 ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array_wrapper.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/nvp.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/split_free.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:28:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_NOTHROW_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN'
#     define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_assign<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:42:57: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    D& operator=(const D& rhs) BOOST_NOEXCEPT_IF(boost::has_nothrow_assign<T>::value) {t = rhs.t; return *this;} \
                                                        ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:70:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_destructor.hpp:12:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins]
template <typename T> struct has_trivial_destructor : public integral_constant<bool, BOOST_HAS_TRIVIAL_DESTRUCTOR(T)>{};
                                                                                     ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR'
#     define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T)  && is_destructible<T>::value)
                                              ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:79:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_assign.hpp:29:7: warning: builtin __has_trivial_assign is deprecated; use __is_trivially_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_TRIVIAL_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:193:43: note: expanded from macro 'BOOST_HAS_TRIVIAL_ASSIGN'
#     define BOOST_HAS_TRIVIAL_ASSIGN(T) (__has_trivial_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:80:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins]
   : public integral_constant <bool, ((::boost::is_pod<T>::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{};
                                                                    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR'
#     define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T)
                                              ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:81:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins]
   BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX
   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY'
#     define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference<T>::value)
                                        ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:34:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:131:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:39:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/linear_algebra.hpp:20:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:40:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/unscale.hpp:28:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<bool, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base<bool>' requested here
    BOOST_HASH_SPECIALIZE(bool)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<bool, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:610:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char>' requested here
    BOOST_HASH_SPECIALIZE(char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<signed char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:611:5: note: in instantiation of template class 'boost::hash_detail::hash_base<signed char>' requested here
    BOOST_HASH_SPECIALIZE(signed char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<signed char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned char>' requested here
    BOOST_HASH_SPECIALIZE(unsigned char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<wchar_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:614:5: note: in instantiation of template class 'boost::hash_detail::hash_base<wchar_t>' requested here
    BOOST_HASH_SPECIALIZE(wchar_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<wchar_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char16_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char16_t>' requested here
    BOOST_HASH_SPECIALIZE(char16_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char16_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char32_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char32_t>' requested here
    BOOST_HASH_SPECIALIZE(char32_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char32_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<short, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base<short>' requested here
    BOOST_HASH_SPECIALIZE(short)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<short, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned short, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:623:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned short>' requested here
    BOOST_HASH_SPECIALIZE(unsigned short)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned short, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<int, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base<int>' requested here
    BOOST_HASH_SPECIALIZE(int)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<int, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned int, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned int>' requested here
    BOOST_HASH_SPECIALIZE(unsigned int)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned int, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long>' requested here
    BOOST_HASH_SPECIALIZE(long)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:627:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned long>' requested here
    BOOST_HASH_SPECIALIZE(unsigned long)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<float, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:629:5: note: in instantiation of template class 'boost::hash_detail::hash_base<float>' requested here
    BOOST_HASH_SPECIALIZE(float)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<float, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<double, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base<double>' requested here
    BOOST_HASH_SPECIALIZE(double)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<double, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long double, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:631:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long double>' requested here
    BOOST_HASH_SPECIALIZE(long double)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long double, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::string)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::wstring, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:635:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::wstring>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::wstring)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::wstring, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::u16string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:638:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::u16string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::basic_string<char16_t>)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::u16string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::u32string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:641:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::u32string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::basic_string<char32_t>)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::u32string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long long>' requested here
    BOOST_HASH_SPECIALIZE(boost::long_long_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned long long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned long long>' requested here
    BOOST_HASH_SPECIALIZE(boost::ulong_long_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned long long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:663:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here
    BOOST_HASH_SPECIALIZE(boost::int128_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned __int128, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:664:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned __int128>' requested here
    BOOST_HASH_SPECIALIZE(boost::uint128_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned __int128, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::type_index, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:679:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::type_index>' requested here
    BOOST_HASH_SPECIALIZE(std::type_index)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::type_index, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat/fun/columns_dot_self.hpp:8:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:38:41: warning: all paths through this function will call itself [-Winfinite-recursion]
  inline static double square(double x) { return square(x); }
                                        ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:70:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat/functor/integrate_ode_adams.hpp:5:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat/functor/cvodes_integrator.hpp:126:18: warning: unused variable 'coupled_size' [-Wunused-variable]
    const size_t coupled_size = cvodes_data.coupled_ode_.size();
                 ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
/data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1238:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
    int ret = stan::services::error_codes::CONFIG;
        ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<const std::error_category *, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:692:18: note: in instantiation of template class 'boost::hash_detail::hash_base<const std::error_category *>' requested here
        : public boost::hash_detail::hash_base<T*>
                 ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:420:24: note: in instantiation of template class 'boost::hash<const std::error_category *>' requested here
        boost::hash<T> hasher;
                       ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:551:9: note: in instantiation of function template specialization 'boost::hash_combine<const std::error_category *>' requested here
        hash_combine(seed, &v.category());
        ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<const std::error_category *, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/core.hpp:46:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function]
static void set_zero_all_adjoints() {
            ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/core.hpp:47:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints_nested.hpp:17:13: warning: 'static' function 'set_zero_all_adjoints_nested' declared in header file should be declared 'static inline' [-Wunneeded-internal-declaration]
static void set_zero_all_adjoints_nested() {
            ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:278:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_log.hpp:5:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_lpmf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef]
  using T_partials_vec = typename Eigen::Matrix<T_partials_return, -1, 1>;
        ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:328:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_log.hpp:5:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_lpmf.hpp:52:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef]
  using T_alpha_val = typename std::conditional_t<
        ^
In file included from stanExports_single_season.cc:5:
In file included from ./stanExports_single_season.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:51:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:27:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef]
    using idx_t = typename index_type<matrix_v>::type;
          ^
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:64:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef]
    using idx_t = typename index_type<matrix_d>::type;
          ^
In file included from stanExports_single_season.cc:5:
./stanExports_single_season.h:2462:24: warning: unused typedef 'local_scalar_t__' [-Wunused-local-typedef]
        typedef double local_scalar_t__;
                       ^
77 warnings generated.
/usr/local/clang15/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"../inst/include" -I"/data/gannet/ripley/R/test-clang/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error  -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/rstan/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang15/include    -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fpic  -O3 -Wall -pedantic -frtti  -c stanExports_spatial.cc -o stanExports_spatial.o
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:1:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Core:540:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:2:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/LU:47:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Cholesky:12:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Jacobi:29:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:3:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Cholesky:43:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/QR:15:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Householder:27:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:4:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/QR:48:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:5:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SVD:48:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:6:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Geometry:58:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Dense:7:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Eigenvalues:58:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
      Index count = 0;
            ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:66:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:27:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/OrderingMethods:71:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCholesky:43:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:31:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:33:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
  Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
        ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
  Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
        ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:32:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseQR:34:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:33:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:32:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/CholmodSupport:45:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:35:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:39:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/Polynomials:135:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:40:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:44:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:239:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  int count = 0;
      ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:40:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
/data/gannet/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:283:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:138:7: warning: unused variable 'n' [-Wunused-variable]
  int n = G.rows();  // number of states
      ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array_wrapper.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/nvp.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/split_free.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:28:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_NOTHROW_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN'
#     define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array_wrapper.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/nvp.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/split_free.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:29:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_CONSTRUCTOR(T)>{};
                                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR'
#     define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible<T>::value)
                                               ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array_wrapper.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/nvp.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/split_free.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:30:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_copy_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_COPY(T)>{};
                                                                                        ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY'
#     define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile<T>::value && !is_reference<T>::value && is_copy_constructible<T>::value)
                                        ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array_wrapper.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/nvp.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/split_free.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:30:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY'
#     define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile<T>::value && !is_reference<T>::value && is_copy_constructible<T>::value)
                                        ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_copy_constructor<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:39:54: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    explicit D(const T& t_) BOOST_NOEXCEPT_IF(boost::has_nothrow_copy_constructor<T>::value) : t(t_) {}          \
                                                     ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array_wrapper.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/nvp.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/split_free.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:29:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_CONSTRUCTOR(T)>{};
                                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR'
#     define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible<T>::value)
                                               ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:69:68: note: in instantiation of template class 'boost::has_nothrow_constructor<unsigned int>' requested here
template <class T> struct has_nothrow_default_constructor : public has_nothrow_constructor<T>{};
                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_default_constructor<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:40:34: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    D() BOOST_NOEXCEPT_IF(boost::has_nothrow_default_constructor<T>::value) : t() {}                             \
                                 ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/array_wrapper.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/nvp.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/split_free.hpp:22:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:14:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:28:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_NOTHROW_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN'
#     define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_assign<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:42:57: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    D& operator=(const D& rhs) BOOST_NOEXCEPT_IF(boost::has_nothrow_assign<T>::value) {t = rhs.t; return *this;} \
                                                        ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:70:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_destructor.hpp:12:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins]
template <typename T> struct has_trivial_destructor : public integral_constant<bool, BOOST_HAS_TRIVIAL_DESTRUCTOR(T)>{};
                                                                                     ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR'
#     define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T)  && is_destructible<T>::value)
                                              ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:79:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_assign.hpp:29:7: warning: builtin __has_trivial_assign is deprecated; use __is_trivially_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_TRIVIAL_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:193:43: note: expanded from macro 'BOOST_HAS_TRIVIAL_ASSIGN'
#     define BOOST_HAS_TRIVIAL_ASSIGN(T) (__has_trivial_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:80:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins]
   : public integral_constant <bool, ((::boost::is_pod<T>::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{};
                                                                    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR'
#     define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T)
                                              ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/vector.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/storage.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/ublas/traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:81:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins]
   BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX
   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY'
#     define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference<T>::value)
                                        ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:34:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:131:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:39:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/linear_algebra.hpp:20:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:40:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/unscale.hpp:28:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:21:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/data/gannet/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/data/gannet/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<bool, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base<bool>' requested here
    BOOST_HASH_SPECIALIZE(bool)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<bool, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:610:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char>' requested here
    BOOST_HASH_SPECIALIZE(char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<signed char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:611:5: note: in instantiation of template class 'boost::hash_detail::hash_base<signed char>' requested here
    BOOST_HASH_SPECIALIZE(signed char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<signed char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned char>' requested here
    BOOST_HASH_SPECIALIZE(unsigned char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<wchar_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:614:5: note: in instantiation of template class 'boost::hash_detail::hash_base<wchar_t>' requested here
    BOOST_HASH_SPECIALIZE(wchar_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<wchar_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char16_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char16_t>' requested here
    BOOST_HASH_SPECIALIZE(char16_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char16_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char32_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char32_t>' requested here
    BOOST_HASH_SPECIALIZE(char32_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char32_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<short, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base<short>' requested here
    BOOST_HASH_SPECIALIZE(short)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<short, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned short, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:623:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned short>' requested here
    BOOST_HASH_SPECIALIZE(unsigned short)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned short, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<int, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base<int>' requested here
    BOOST_HASH_SPECIALIZE(int)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<int, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned int, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned int>' requested here
    BOOST_HASH_SPECIALIZE(unsigned int)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned int, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long>' requested here
    BOOST_HASH_SPECIALIZE(long)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:627:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned long>' requested here
    BOOST_HASH_SPECIALIZE(unsigned long)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<float, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:629:5: note: in instantiation of template class 'boost::hash_detail::hash_base<float>' requested here
    BOOST_HASH_SPECIALIZE(float)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<float, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<double, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base<double>' requested here
    BOOST_HASH_SPECIALIZE(double)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<double, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long double, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:631:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long double>' requested here
    BOOST_HASH_SPECIALIZE(long double)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long double, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::string)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::wstring, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:635:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::wstring>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::wstring)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::wstring, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::u16string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:638:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::u16string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::basic_string<char16_t>)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::u16string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::u32string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:641:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::u32string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::basic_string<char32_t>)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::u32string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long long>' requested here
    BOOST_HASH_SPECIALIZE(boost::long_long_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned long long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned long long>' requested here
    BOOST_HASH_SPECIALIZE(boost::ulong_long_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned long long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:663:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here
    BOOST_HASH_SPECIALIZE(boost::int128_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned __int128, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:664:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned __int128>' requested here
    BOOST_HASH_SPECIALIZE(boost::uint128_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned __int128, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::type_index, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:679:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::type_index>' requested here
    BOOST_HASH_SPECIALIZE(std::type_index)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::type_index, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat/fun/columns_dot_self.hpp:8:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:38:41: warning: all paths through this function will call itself [-Winfinite-recursion]
  inline static double square(double x) { return square(x); }
                                        ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:70:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat/functor/integrate_ode_adams.hpp:5:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat/functor/cvodes_integrator.hpp:126:18: warning: unused variable 'coupled_size' [-Wunused-variable]
    const size_t coupled_size = cvodes_data.coupled_ode_.size();
                 ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
/data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1238:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
    int ret = stan::services::error_codes::CONFIG;
        ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:336:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr.hpp:34:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/arr/functor/integrate_ode_rk45.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:76:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/numeric/odeint/integrate/observer_collection.hpp:23:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function.hpp:30:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/detail/prologue.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/function/function_base.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index.hpp:29:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_index/stl_type_index.hpp:47:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<const std::error_category *, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:692:18: note: in instantiation of template class 'boost::hash_detail::hash_base<const std::error_category *>' requested here
        : public boost::hash_detail::hash_base<T*>
                 ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:420:24: note: in instantiation of template class 'boost::hash<const std::error_category *>' requested here
        boost::hash<T> hasher;
                       ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:551:9: note: in instantiation of function template specialization 'boost::hash_combine<const std::error_category *>' requested here
        hash_combine(seed, &v.category());
        ^
/usr/local/clang15/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<const std::error_category *, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang15/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang15/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/core.hpp:46:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function]
static void set_zero_all_adjoints() {
            ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/core.hpp:47:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints_nested.hpp:17:13: warning: 'static' function 'set_zero_all_adjoints_nested' declared in header file should be declared 'static inline' [-Wunneeded-internal-declaration]
static void set_zero_all_adjoints_nested() {
            ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:278:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_log.hpp:5:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_lpmf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef]
  using T_partials_vec = typename Eigen::Matrix<T_partials_return, -1, 1>;
        ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat.hpp:328:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_log.hpp:5:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_lpmf.hpp:52:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef]
  using T_alpha_val = typename std::conditional_t<
        ^
In file included from stanExports_spatial.cc:5:
In file included from ./stanExports_spatial.h:20:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat.hpp:51:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:27:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef]
    using idx_t = typename index_type<matrix_v>::type;
          ^
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:64:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef]
    using idx_t = typename index_type<matrix_d>::type;
          ^
In file included from stanExports_spatial.cc:5:
./stanExports_spatial.h:2589:24: warning: unused typedef 'local_scalar_t__' [-Wunused-local-typedef]
        typedef double local_scalar_t__;
                       ^
77 warnings generated.
/usr/local/clang15/bin/clang++ -std=gnu++14 -shared -L/usr/local/clang/lib64 -L/usr/local/clang15/lib -L/usr/local/lib64 -o ubms.so RcppExports.o exp_counts_occu.o simz.o stanExports_colext.o stanExports_single_season.o stanExports_spatial.o -L/data/gannet/ripley/R/test-clang/RcppParallel/lib/ -Wl,-rpath,/data/gannet/ripley/R/test-clang/RcppParallel/lib/ -ltbb -ltbbmalloc
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/ubms/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/ubms/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/ubms/src'
installing to /data/gannet/ripley/R/packages/tests-clang/ubms.Rcheck/00LOCK-ubms/00new/ubms/libs
** R
** inst
** byte-compile and prepare package for lazy loading
DIAGNOSTIC(S) FROM PARSER:
Info: integer division implicitly rounds to integer. Found int division: num_elements(logit_p) / M
 Positive values rounded down, negative values rounded up or down in platform-dependent way.

DIAGNOSTIC(S) FROM PARSER:
Info: integer division implicitly rounds to integer. Found int division: num_elements(logit_p) / M
 Positive values rounded down, negative values rounded up or down in platform-dependent way.

** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ubms)