• using R Under development (unstable) (2026-09-25 r90590)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     clang version 23.1.2     flang version 23.1.2
• running under: Fedora Linux 44 (Server Edition)
• using session charset: UTF-8 * current time: 2026-09-27 17:43:17 UTC
• using option ‘--no-stop-on-test-error’
• checking for file ‘tidypredict/DESCRIPTION’ ... OK
• this is package ‘tidypredict’ version ‘1.2.1’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘tidypredict’ can be installed ... [9s/24s] OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [22s/67s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [161s/473s] OK   Running ‘testthat.R’ [160s/472s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [126s/392s] ERROR Error(s) in re-building vignettes: --- re-building ‘C5.0.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘C5.0.Rmd’ --- re-building ‘aorsf.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘aorsf.Rmd’ --- re-building ‘bagging.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘bagging.Rmd’ --- re-building ‘bart.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘bart.Rmd’ --- re-building ‘cubist.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘cubist.Rmd’ --- re-building ‘fda.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘fda.Rmd’ --- re-building ‘float-precision.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘float-precision.Rmd’ --- re-building ‘glm.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘glm.Rmd’ --- re-building ‘glmnet.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘glmnet.Rmd’ --- re-building ‘h2o.Rmd’ using rmarkdown openjdk version "25.0.4.1" 2026-08-18 OpenJDK Runtime Environment (Red_Hat-25.0.4.1.1-1) (build 25.0.4.1+1) OpenJDK 64-Bit Server VM (Red_Hat-25.0.4.1.1-1) (build 25.0.4.1+1, mixed mode, sharing) [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘h2o.Rmd’ --- re-building ‘ksvm.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘ksvm.Rmd’ --- re-building ‘lda.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘lda.Rmd’ --- re-building ‘lightgbm.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘lightgbm.Rmd’ --- re-building ‘lm.Rmd’ using rmarkdown Quitting from lm.Rmd:123-131 [unnamed-chunk-12] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `fit()`: ! `...` must be empty. ✖ Problematic argument: `offset`. ℹ Arguments for the model fit should be passed to `set_engine()`, and case   weights to the `case_weights` argument. ℹ To use an offset, include it in the formula, as in `y ~ x + offset(z)`. --- Backtrace:     ▆  1. ├─linear_reg() %>% set_engine("lm") %>% ...  2. ├─generics::fit(., mpg ~ wt + cyl, offset = am, data = mtcars)  3. └─parsnip::fit.model_spec(., mpg ~ wt + cyl, offset = am, data = mtcars) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'lm.Rmd' failed with diagnostics: `...` must be empty. ✖ Problematic argument: `offset`. ℹ Arguments for the model fit should be passed to `set_engine()`, and case   weights to the `case_weights` argument. ℹ To use an offset, include it in the formula, as in `y ~ x + offset(z)`. --- failed re-building ‘lm.Rmd’ --- re-building ‘mars.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘mars.Rmd’ --- re-building ‘mboost.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘mboost.Rmd’ --- re-building ‘mixOmics.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘mixOmics.Rmd’ --- re-building ‘models.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘models.Rmd’ --- re-building ‘multinom.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘multinom.Rmd’ --- re-building ‘naivebayes.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘naivebayes.Rmd’ --- re-building ‘nnet.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘nnet.Rmd’ --- re-building ‘non-r.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘non-r.Rmd’ --- re-building ‘nullmodel.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘nullmodel.Rmd’ --- re-building ‘partykit.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘partykit.Rmd’ --- re-building ‘qda.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘qda.Rmd’ --- re-building ‘ranger.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘ranger.Rmd’ --- re-building ‘regression.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘regression.Rmd’ --- re-building ‘rf.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘rf.Rmd’ --- re-building ‘rpart.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘rpart.Rmd’ --- re-building ‘save.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘save.Rmd’ --- re-building ‘sda.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘sda.Rmd’ --- re-building ‘sparsediscrim.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘sparsediscrim.Rmd’ --- re-building ‘sql.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘sql.Rmd’ --- re-building ‘tree-internals.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘tree-internals.Rmd’ --- re-building ‘tree.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘tree.Rmd’ --- re-building ‘xgboost.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘xgboost.Rmd’ --- re-building ‘xrf.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘xrf.Rmd’ SUMMARY: processing the following file failed:   ‘lm.Rmd’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... OK
• checking HTML version of manual ... OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 1 ERROR