* installing *source* package ‘tgcd’ ...
** package ‘tgcd’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 18.1.7’
using Fortran compiler: ‘flang-new version 18.1.7’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/tgcd/src'
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  bisect.f90 -o bisect.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  calcAm.f90 -o calcAm.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  calcFct.f90 -o calcFct.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  calcLv.f90 -o calcLv.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  calcMaty_frt1.f90 -o calcMaty_frt1.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  calcMaty_frt2.f90 -o calcMaty_frt2.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  calcMaty_frt3.f90 -o calcMaty_frt3.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  calcMaty_gnr1.f90 -o calcMaty_gnr1.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  calcMaty_gnr2.f90 -o calcMaty_gnr2.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  calcMaty_gnr3.f90 -o calcMaty_gnr3.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  calcMaty_lw.f90 -o calcMaty_lw.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  calcMaty_lw1.f90 -o calcMaty_lw1.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  calcMaty_mix1.f90 -o calcMaty_mix1.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  calcMaty_mix2.f90 -o calcMaty_mix2.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  calcMaty_mix3.f90 -o calcMaty_mix3.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  calcMaty_pdf1.f90 -o calcMaty_pdf1.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  calcMaty_pdf2.f90 -o calcMaty_pdf2.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  calcShape.f90 -o calcShape.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  calcei.f90 -o calcei.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  comb_next.f90 -o comb_next.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  hpSort.f90 -o hpSort.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  lambertW.f90 -o lambertW.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  lmtl_all.f90 -o lmtl_all.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c lsoda.f -o lsoda.o
./lsoda.f:2416:2: warning: Compiler directive was ignored
./lsoda.f:2537:2: warning: Compiler directive was ignored
./lsoda.f:2705:2: warning: Compiler directive was ignored
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  lubksb.f90 -o lubksb.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  ludcmp.f90 -o ludcmp.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  minpack.f90 -o minpack.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  qeOTOR.f90 -o qeOTOR.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  r8vec_uniform_01.f90 -o r8vec_uniform_01.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  savgol.f90 -o savgol.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  savgol_filter.f90 -o savgol_filter.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  simPeak.f90 -o simPeak.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  tgcd_drive.f90 -o tgcd_drive.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  tgcd_frt.f90 -o tgcd_frt.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c tgcd_init.c -o tgcd_init.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  tgcd_nonfrt.f90 -o tgcd_nonfrt.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  tgcfunc_frt1.f90 -o tgcfunc_frt1.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  tgcfunc_frt2.f90 -o tgcfunc_frt2.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  tgcfunc_frt3.f90 -o tgcfunc_frt3.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  tgcfunc_gnr1.f90 -o tgcfunc_gnr1.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  tgcfunc_gnr2.f90 -o tgcfunc_gnr2.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  tgcfunc_gnr3.f90 -o tgcfunc_gnr3.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  tgcfunc_lw.f90 -o tgcfunc_lw.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  tgcfunc_lw1.f90 -o tgcfunc_lw1.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  tgcfunc_mix1.f90 -o tgcfunc_mix1.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  tgcfunc_mix2.f90 -o tgcfunc_mix2.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  tgcfunc_mix3.f90 -o tgcfunc_mix3.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  tgcfunc_pdf1.f90 -o tgcfunc_pdf1.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  tgcfunc_pdf2.f90 -o tgcfunc_pdf2.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  wrightOmega.f90 -o wrightOmega.o
/usr/local/clang18/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o tgcd.so bisect.o calcAm.o calcFct.o calcLv.o calcMaty_frt1.o calcMaty_frt2.o calcMaty_frt3.o calcMaty_gnr1.o calcMaty_gnr2.o calcMaty_gnr3.o calcMaty_lw.o calcMaty_lw1.o calcMaty_mix1.o calcMaty_mix2.o calcMaty_mix3.o calcMaty_pdf1.o calcMaty_pdf2.o calcShape.o calcei.o comb_next.o hpSort.o lambertW.o lmtl_all.o lsoda.o lubksb.o ludcmp.o minpack.o qeOTOR.o r8vec_uniform_01.o savgol.o savgol_filter.o simPeak.o tgcd_drive.o tgcd_frt.o tgcd_init.o tgcd_nonfrt.o tgcfunc_frt1.o tgcfunc_frt2.o tgcfunc_frt3.o tgcfunc_gnr1.o tgcfunc_gnr2.o tgcfunc_gnr3.o tgcfunc_lw.o tgcfunc_lw1.o tgcfunc_mix1.o tgcfunc_mix2.o tgcfunc_mix3.o tgcfunc_pdf1.o tgcfunc_pdf2.o wrightOmega.o -lFortran_main -lFortranRuntime -lFortranDecimal -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/tgcd/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/tgcd/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/tgcd/src'
installing to /data/gannet/ripley/R/packages/tests-clang/tgcd.Rcheck/00LOCK-tgcd/00new/tgcd/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (tgcd)