* installing *source* package ‘stpp’ ...
** this is package ‘stpp’ version ‘2.0-8’
** package ‘stpp’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 22.1.1 (https://github.com/llvm/llvm-project fef02d48c08db859ef83f84232ed78bd9d1c323a)’
using Fortran compiler: ‘flang version 22.1.1 (https://github.com/llvm/llvm-project fef02d48c08db859ef83f84232ed78bd9d1c323a)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/stpp/src'
flang-22 -fpic -O2 -pedantic -c astk.f -o astk.o
flang-22 -fpic -O2 -pedantic -c circ.f -o circ.o
./circ.f:452:11: warning: Value of uninitialized local variable 'a' is used but never defined [-Wused-undefined-variable]
1 A,ALPHA,BLPHA,BK,BK1,BK2,C,D,DM,D1,D2,D3,ENU,EPS,ESTF,ESTM,
^
./circ.f:452:38: warning: Value of uninitialized local variable 'd' is used but never defined [-Wused-undefined-variable]
1 A,ALPHA,BLPHA,BK,BK1,BK2,C,D,DM,D1,D2,D3,ENU,EPS,ESTF,ESTM,
^
./circ.f:452:56: warning: Value of uninitialized local variable 'eps' is used but never defined [-Wused-undefined-variable]
1 A,ALPHA,BLPHA,BK,BK1,BK2,C,D,DM,D1,D2,D3,ENU,EPS,ESTF,ESTM,
^^^
./circ.f:452:60: warning: Value of uninitialized local variable 'estf' is used but never defined [-Wused-undefined-variable]
1 A,ALPHA,BLPHA,BK,BK1,BK2,C,D,DM,D1,D2,D3,ENU,EPS,ESTF,ESTM,
^^^^
./circ.f:452:65: warning: Value of uninitialized local variable 'estm' is used but never defined [-Wused-undefined-variable]
1 A,ALPHA,BLPHA,BK,BK1,BK2,C,D,DM,D1,D2,D3,ENU,EPS,ESTF,ESTM,
^^^^
./circ.f:453:14: warning: Value of uninitialized local variable 'four' is used but never defined [-Wused-undefined-variable]
2 EX,FOUR,F0,F1,F2,HALF,ONE,P,P0,Q,Q0,R,RATIO,S,SQXMIN,T,TINYX,
^^^^
./circ.f:453:28: warning: Value of uninitialized local variable 'half' is used but never defined [-Wused-undefined-variable]
2 EX,FOUR,F0,F1,F2,HALF,ONE,P,P0,Q,Q0,R,RATIO,S,SQXMIN,T,TINYX,
^^^^
./circ.f:453:33: warning: Value of uninitialized local variable 'one' is used but never defined [-Wused-undefined-variable]
2 EX,FOUR,F0,F1,F2,HALF,ONE,P,P0,Q,Q0,R,RATIO,S,SQXMIN,T,TINYX,
^^^
./circ.f:453:37: warning: Value of uninitialized local variable 'p' is used but never defined [-Wused-undefined-variable]
2 EX,FOUR,F0,F1,F2,HALF,ONE,P,P0,Q,Q0,R,RATIO,S,SQXMIN,T,TINYX,
^
./circ.f:453:42: warning: Value of uninitialized local variable 'q' is used but never defined [-Wused-undefined-variable]
2 EX,FOUR,F0,F1,F2,HALF,ONE,P,P0,Q,Q0,R,RATIO,S,SQXMIN,T,TINYX,
^
./circ.f:453:47: warning: Value of uninitialized local variable 'r' is used but never defined [-Wused-undefined-variable]
2 EX,FOUR,F0,F1,F2,HALF,ONE,P,P0,Q,Q0,R,RATIO,S,SQXMIN,T,TINYX,
^
./circ.f:453:55: warning: Value of uninitialized local variable 's' is used but never defined [-Wused-undefined-variable]
2 EX,FOUR,F0,F1,F2,HALF,ONE,P,P0,Q,Q0,R,RATIO,S,SQXMIN,T,TINYX,
^
./circ.f:453:57: warning: Value of uninitialized local variable 'sqxmin' is used but never defined [-Wused-undefined-variable]
2 EX,FOUR,F0,F1,F2,HALF,ONE,P,P0,Q,Q0,R,RATIO,S,SQXMIN,T,TINYX,
^^^^^^
./circ.f:453:64: warning: Value of uninitialized local variable 't' is used but never defined [-Wused-undefined-variable]
2 EX,FOUR,F0,F1,F2,HALF,ONE,P,P0,Q,Q0,R,RATIO,S,SQXMIN,T,TINYX,
^
./circ.f:453:66: warning: Value of uninitialized local variable 'tinyx' is used but never defined [-Wused-undefined-variable]
2 EX,FOUR,F0,F1,F2,HALF,ONE,P,P0,Q,Q0,R,RATIO,S,SQXMIN,T,TINYX,
^^^^^
./circ.f:454:11: warning: Value of uninitialized local variable 'two' is used but never defined [-Wused-undefined-variable]
3 TWO,TWONU,TWOX,T1,T2,WMINF,X,XINF,XMAX,XMIN,X2BY4,ZERO
^^^
./circ.f:454:40: warning: Value of uninitialized local variable 'xinf' is used but never defined [-Wused-undefined-variable]
3 TWO,TWONU,TWOX,T1,T2,WMINF,X,XINF,XMAX,XMIN,X2BY4,ZERO
^^^^
./circ.f:454:45: warning: Value of uninitialized local variable 'xmax' is used but never defined [-Wused-undefined-variable]
3 TWO,TWONU,TWOX,T1,T2,WMINF,X,XINF,XMAX,XMIN,X2BY4,ZERO
^^^^
./circ.f:454:50: warning: Value of uninitialized local variable 'xmin' is used but never defined [-Wused-undefined-variable]
3 TWO,TWONU,TWOX,T1,T2,WMINF,X,XINF,XMAX,XMIN,X2BY4,ZERO
^^^^
./circ.f:454:61: warning: Value of uninitialized local variable 'zero' is used but never defined [-Wused-undefined-variable]
3 TWO,TWONU,TWOX,T1,T2,WMINF,X,XINF,XMAX,XMIN,X2BY4,ZERO
^^^^
./circ.f:792:11: warning: Value of uninitialized local variable 'c' is used but never defined [-Wused-undefined-variable]
1 C,CONV,EPS,FACT,HALF,ONE,P,PI,Q,RES,SQRTPI,SUM,TWELVE,
^
./circ.f:792:18: warning: Value of uninitialized local variable 'eps' is used but never defined [-Wused-undefined-variable]
1 C,CONV,EPS,FACT,HALF,ONE,P,PI,Q,RES,SQRTPI,SUM,TWELVE,
^^^
./circ.f:792:27: warning: Value of uninitialized local variable 'half' is used but never defined [-Wused-undefined-variable]
1 C,CONV,EPS,FACT,HALF,ONE,P,PI,Q,RES,SQRTPI,SUM,TWELVE,
^^^^
./circ.f:792:32: warning: Value of uninitialized local variable 'one' is used but never defined [-Wused-undefined-variable]
1 C,CONV,EPS,FACT,HALF,ONE,P,PI,Q,RES,SQRTPI,SUM,TWELVE,
^^^
./circ.f:792:36: warning: Value of uninitialized local variable 'p' is used but never defined [-Wused-undefined-variable]
1 C,CONV,EPS,FACT,HALF,ONE,P,PI,Q,RES,SQRTPI,SUM,TWELVE,
^
./circ.f:792:38: warning: Value of uninitialized local variable 'pi' is used but never defined [-Wused-undefined-variable]
1 C,CONV,EPS,FACT,HALF,ONE,P,PI,Q,RES,SQRTPI,SUM,TWELVE,
^^
./circ.f:792:41: warning: Value of uninitialized local variable 'q' is used but never defined [-Wused-undefined-variable]
1 C,CONV,EPS,FACT,HALF,ONE,P,PI,Q,RES,SQRTPI,SUM,TWELVE,
^
./circ.f:792:47: warning: Value of uninitialized local variable 'sqrtpi' is used but never defined [-Wused-undefined-variable]
1 C,CONV,EPS,FACT,HALF,ONE,P,PI,Q,RES,SQRTPI,SUM,TWELVE,
^^^^^^
./circ.f:792:58: warning: Value of uninitialized local variable 'twelve' is used but never defined [-Wused-undefined-variable]
1 C,CONV,EPS,FACT,HALF,ONE,P,PI,Q,RES,SQRTPI,SUM,TWELVE,
^^^^^^
./circ.f:793:11: warning: Value of uninitialized local variable 'two' is used but never defined [-Wused-undefined-variable]
2 TWO,X,XBIG,XDEN,XINF,XMININ,XNUM,Y,Y1,YSQ,Z,ZERO
^^^
./circ.f:793:17: warning: Value of uninitialized local variable 'xbig' is used but never defined [-Wused-undefined-variable]
2 TWO,X,XBIG,XDEN,XINF,XMININ,XNUM,Y,Y1,YSQ,Z,ZERO
^^^^
./circ.f:793:27: warning: Value of uninitialized local variable 'xinf' is used but never defined [-Wused-undefined-variable]
2 TWO,X,XBIG,XDEN,XINF,XMININ,XNUM,Y,Y1,YSQ,Z,ZERO
^^^^
./circ.f:793:32: warning: Value of uninitialized local variable 'xminin' is used but never defined [-Wused-undefined-variable]
2 TWO,X,XBIG,XDEN,XINF,XMININ,XNUM,Y,Y1,YSQ,Z,ZERO
^^^^^^
./circ.f:793:55: warning: Value of uninitialized local variable 'zero' is used but never defined [-Wused-undefined-variable]
2 TWO,X,XBIG,XDEN,XINF,XMININ,XNUM,Y,Y1,YSQ,Z,ZERO
^^^^
flang-22 -fpic -O2 -pedantic -c covst.f -o covst.o
flang-22 -fpic -O2 -pedantic -c gspcore.f -o gspcore.o
flang-22 -fpic -O2 -pedantic -c gspcoreinh.f -o gspcoreinh.o
flang-22 -fpic -O2 -pedantic -c gtecore.f -o gtecore.o
flang-22 -fpic -O2 -pedantic -c gtecoreinh.f -o gtecoreinh.o
clang-22 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang22/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c init.c -o init.o
flang-22 -fpic -O2 -pedantic -c klistafunction.f -o klistafunction.o
flang-22 -fpic -O2 -pedantic -c kmmrcore.f -o kmmrcore.o
flang-22 -fpic -O2 -pedantic -c kmmrcoreinh.f -o kmmrcoreinh.o
flang-22 -fpic -O2 -pedantic -c kmmtcore.f -o kmmtcore.o
flang-22 -fpic -O2 -pedantic -c kmmtcoreinh.f -o kmmtcoreinh.o
flang-22 -fpic -O2 -pedantic -c kmrcore.f -o kmrcore.o
flang-22 -fpic -O2 -pedantic -c kmrcoreinh.f -o kmrcoreinh.o
flang-22 -fpic -O2 -pedantic -c kmtcore.f -o kmtcore.o
flang-22 -fpic -O2 -pedantic -c kmtcoreinh.f -o kmtcoreinh.o
flang-22 -fpic -O2 -pedantic -c listafunction.f -o listafunction.o
flang-22 -fpic -O2 -pedantic -c pcffunction.f -o pcffunction.o
flang-22 -fpic -O2 -pedantic -c stikfunction.f -o stikfunction.o
clang-22 -std=gnu23 -shared -L/usr/local/clang/lib64 -L/usr/local/clang22/lib -L/usr/local/clang22/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -L/usr/local/clang21/lib/clang/22/lib/x86_64-unknown-linux-gnu -o stpp.so astk.o circ.o covst.o gspcore.o gspcoreinh.o gtecore.o gtecoreinh.o init.o klistafunction.o kmmrcore.o kmmrcoreinh.o kmmtcore.o kmmtcoreinh.o kmrcore.o kmrcoreinh.o kmtcore.o kmtcoreinh.o listafunction.o pcffunction.o stikfunction.o -lflang_rt.runtime -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/stpp/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/stpp/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/stpp/src'
installing to /data/gannet/ripley/R/packages/tests-clang/stpp.Rcheck/00LOCK-stpp/00new/stpp/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (stpp)