- using R Under development (unstable) (2026-09-10 r90519)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 23.1.1
flang version 23.1.1
- running under: Fedora Linux 44 (Server Edition)
- using session charset: UTF-8
* current time: 2026-09-10 21:31:55 UTC
- using option ‘--no-stop-on-test-error’
- checking for file ‘spmodel/DESCRIPTION’ ... OK
- this is package ‘spmodel’ version ‘0.14.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘spmodel’ can be installed ... [24s/28s] OK
See the install log for details.
- checking installed package size ... INFO
installed size is 6.2Mb
sub-directories of 1Mb or more:
R 2.0Mb
data 1.9Mb
doc 1.5Mb
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking whether startup messages can be suppressed ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [58s/59s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [0m/30m] ERROR
Running examples in ‘spmodel-Ex.R’ failed
The error most likely occurred in:
> ### Name: augment.spmodel
> ### Title: Augment data with information from fitted model objects
> ### Aliases: augment.spmodel augment.splm augment.spautor augment.spglm
> ### augment.spgautor
>
> ### ** Examples
>
> spmod <- splm(z ~ water + tarp,
+ data = caribou,
+ spcov_type = "exponential", xcoord = x, ycoord = y
+ )
> augment(spmod)
# A tibble: 30 × 10
z water tarp x y .fitted .resid .hat .cooksd .std.resid
<dbl> <fct> <fct> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl>
1 2.42 Y clear 1 6 1.97 0.454 0.116 0.209 2.52
2 2.44 Y shade 2 6 2.25 0.190 0.137 0.0465 1.08
3 1.81 Y none 3 6 2.05 -0.237 0.137 0.0756 -1.38
4 1.97 N clear 4 6 2.05 -0.0842 0.174 0.00213 -0.201
5 2.38 N shade 5 6 2.34 0.0402 0.153 0.0158 0.591
6 2.22 Y none 1 5 2.05 0.177 0.148 0.0431 0.998
7 2.10 N clear 2 5 2.05 0.0508 0.156 0.00922 0.447
8 1.80 Y clear 3 5 1.97 -0.163 0.122 0.0134 -0.623
9 1.96 Y shade 4 5 2.25 -0.290 0.119 0.0642 -1.38
10 2.10 Y none 5 5 2.05 0.0521 0.131 0.0265 0.837
# ℹ 20 more rows
> spmod_sulf <- splm(sulfate ~ 1, data = sulfate, spcov_type = "exponential")
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [199s/187s] OK
Running ‘testthat.R’ [199s/186s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [90m/45m] ERROR
Error(s) in re-building vignettes:
--- re-building ‘introduction.Rmd’ using rmarkdown
OMP: Warning #96: Cannot form a team with 28 threads, using 2 instead.
OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set).
- checking PDF version of manual ... OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 2 ERRORs