• using R Under development (unstable) (2026-01-24 r89326)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     clang version 21.1.8     flang version 21.1.8
• running under: Fedora Linux 42 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘sp/DESCRIPTION’ ... OK
• this is package ‘sp’ version ‘2.2-0’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘sp’ can be installed ... [32s/48s] OK See the install log for details.
• used C compiler: ‘clang version 21.1.8’
• checking installed package size ... INFO   installed size is 9.2Mb   sub-directories of 1Mb or more:     doc 7.6Mb
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking whether startup messages can be suppressed ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [52s/89s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [18s/32s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [20s/31s] NOTE   Running ‘agg.R’   Comparing ‘agg.Rout’ to ‘agg.Rout.save’ ... OK   Running ‘base.R’   Comparing ‘base.Rout’ to ‘base.Rout.save’ ... 179c179 < NAs :1 --- > NA's :1   Running ‘fail1.R’   Comparing ‘fail1.Rout’ to ‘fail1.Rout.save’ ... OK   Running ‘grid.R’   Comparing ‘grid.Rout’ to ‘grid.Rout.save’ ... OK   Running ‘over2.R’   Comparing ‘over2.Rout’ to ‘over2.Rout.save’ ... OK   Running ‘pass1.R’   Comparing ‘pass1.Rout’ to ‘pass1.Rout.save’ ... 58c58 < NAs :2 NAs : 1 --- > NA's :2 NA's : 1 178,181c178,181 < 1st Qu.:1.000 N.unique :2 1st Qu.:1.000 < Median :1.000 N.blank :0 Median :1.000 < Mean :1.333 Min.nchar:1 Mean :1.333 < 3rd Qu.:2.000 Max.nchar:1 3rd Qu.:2.000 --- > 1st Qu.:1.000 Class :character 1st Qu.:1.000 > Median :1.000 Mode :character Median :1.000 > Mean :1.333 Mean :1.333 > 3rd Qu.:2.000 3rd Qu.:2.000 196,199c196,199 < N.unique :2 1st Qu.:1.000 N.unique :2 1st Qu.:1.000 < N.blank :0 Median :1.000 N.blank :0 Median :1.000 < Min.nchar:3 Mean :1.333 Min.nchar:1 Mean :1.333 < Max.nchar:3 3rd Qu.:2.000 Max.nchar:1 3rd Qu.:2.000 --- > Class :character 1st Qu.:1.000 Class :character 1st Qu.:1.000 > Mode :character Median :1.000 Mode :character Median :1.000 > Mean :1.333 Mean :1.333 > 3rd Qu.:2.000 3rd Qu.:2.000 227c227 < NAs :2 NAs : 1 --- > NA's :2 NA's : 1 261c261 < NAs :2 NAs : 1 --- > NA's :2 NA's : 1 320c320 < NAs :8112 NAs :8112 NAs :8112 NAs :8112 NAs :8112 --- > NA's:8112 NA's:8112 NA's:8112 NA's:8112 NA's:8112 340c340 < NAs :8112 NAs :8112 NAs :8112 NAs :8112 NAs :8112 --- > NA's:8112 NA's:8112 NA's:8112 NA's:8112 NA's:8112 396,399c396,397 < N.unique :1 < N.blank :0 < Min.nchar:3 < Max.nchar:3 --- > Class :character > Mode :character 451,454c449,450 < N.unique :1 < N.blank :0 < Min.nchar:3 < Max.nchar:3 --- > Class :character > Mode :character   Running ‘point.in.polygon.R’   Comparing ‘point.in.polygon.Rout’ to ‘point.in.polygon.Rout.save’ ... OK   Running ‘sel.R’   Comparing ‘sel.Rout’ to ‘sel.Rout.save’ ... OK   Running ‘sp1.R’   Comparing ‘sp1.Rout’ to ‘sp1.Rout.save’ ... 80c80 < NAs :2 --- > NA's :2 88c88 < NAs : 1 --- > NA's : 1   Running ‘spDists.R’   Comparing ‘spDists.Rout’ to ‘spDists.Rout.save’ ... OK   Running ‘spplot.R’   Comparing ‘spplot.Rout’ to ‘spplot.Rout.save’ ... OK   Running ‘zerodist.R’   Comparing ‘zerodist.Rout’ to ‘zerodist.Rout.save’ ... 53c53 < NAs :2 --- > NA's :2 61c61 < NAs : 1 --- > NA's : 1 88c88 < NAs :2 --- > NA's :2 96c96 < NAs : 1 --- > NA's : 1
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [103s/132s] OK
• checking PDF version of manual ... [14s/22s] OK
• checking HTML version of manual ... [14s/18s] OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 1 NOTE