* installing *source* package ‘smoothbp’ ... ** this is package ‘smoothbp’ version ‘0.2.8’ ** package ‘smoothbp’ successfully unpacked and MD5 sums checked ** using staged installation Using cargo 1.98.1 (797e8a9bc 2026-08-05) (Fedora 1.98.1-1.fc44) Using rustc 1.98.1 (48a229cea 2026-09-01) (Fedora 1.98.1-1.fc44) Building for CRAN. Writing `src/Makevars`. `tools/config.R` has finished. ** libs using C compiler: ‘clang version 23.1.1’ make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-clang/smoothbp/src' /usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c entrypoint.c -o entrypoint.o if [ -d ./vendor ]; then \ echo "=== Using offline vendor directory ==="; \ mkdir -p /data/localhost/ripley/R/packages/tests-clang/smoothbp/src/.cargo && \ printf '[source.crates-io]\nreplace-with = "vendored-sources"\n\n[source.vendored-sources]\ndirectory = "/data/localhost/ripley/R/packages/tests-clang/smoothbp/src/vendor"\n' > /data/localhost/ripley/R/packages/tests-clang/smoothbp/src/.cargo/config.toml; \ elif [ -f ./rust/vendor.tar.xz ]; then \ echo "=== Using offline vendor tarball ==="; \ tar xf rust/vendor.tar.xz && \ mkdir -p /data/localhost/ripley/R/packages/tests-clang/smoothbp/src/.cargo && \ printf '[source.crates-io]\nreplace-with = "vendored-sources"\n\n[source.vendored-sources]\ndirectory = "/data/localhost/ripley/R/packages/tests-clang/smoothbp/src/vendor"\n' > /data/localhost/ripley/R/packages/tests-clang/smoothbp/src/.cargo/config.toml; \ fi === Using offline vendor tarball === export CARGO_HOME=/data/localhost/ripley/R/packages/tests-clang/smoothbp/src/.cargo && \ export MAKEFLAGS="" && \ export PATH="/usr/local/clang/bin:/data/localhost/ripley/bin:/usr/local/bin:/usr/local/texbin:/usr/sbin:/usr/lib64/qt-3.3/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/data/localhost/ripley/.composer/vendor/bin:/usr/lib64/openmpi/bin:/data/localhost/ripley/.cargo/bin" && \ RUSTFLAGS=" --print=native-static-libs" cargo build -j 2 --offline --lib --release --manifest-path=./rust/Cargo.toml --target-dir ./rust/target Compiling autocfg v1.5.0 Compiling proc-macro2 v1.0.106 Compiling libm v0.2.16 Compiling num-traits v0.2.19 Compiling unicode-ident v1.0.24 Compiling quote v1.0.45 Compiling libc v0.2.186 Compiling zerocopy v0.8.48 Compiling paste v1.0.15 Compiling cfg-if v1.0.4 Compiling bytemuck v1.25.0 Compiling safe_arch v0.7.4 Compiling getrandom v0.2.17 Compiling crossbeam-utils v0.8.21 Compiling rand_core v0.6.4 Compiling wide v0.7.33 Compiling ppv-lite86 v0.2.21 Compiling approx v0.5.1 Compiling num-complex v0.4.6 Compiling syn v2.0.117 Compiling matrixmultiply v0.3.10 Compiling syn v1.0.109 Compiling rand_chacha v0.3.1 Compiling num-integer v0.1.46 Compiling rawpointer v0.2.1 Compiling extendr-ffi v0.9.0 Compiling num-rational v0.4.2 Compiling crossbeam-epoch v0.9.18 Compiling rand v0.8.6 Compiling rayon-core v1.13.0 Compiling typenum v1.20.0 Compiling rand_distr v0.4.3 Compiling crossbeam-deque v0.8.6 Compiling simba v0.6.0 Compiling nalgebra-macros v0.1.0 Compiling lazy_static v1.5.0 Compiling extendr-api v0.9.0 Compiling extendr-macros v0.9.0 Compiling nalgebra v0.29.0 Compiling nalgebra-macros v0.2.2 Compiling readonly v0.2.13 Compiling simba v0.9.1 Compiling either v1.15.0 Compiling once_cell v1.21.4 Compiling nalgebra v0.33.3 Compiling statrs v0.16.1 Compiling rayon v1.12.0 Compiling smoothbp v0.1.0 (/data/localhost/ripley/R/packages/tests-clang/smoothbp/src/rust) warning: unused import: `extendr_api::prelude` --> src/bridge.rs:6:5 | 6 | use extendr_api::prelude::*; | ^^^^^^^^^^^^^^^^^^^^ | = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default warning: fields `p_b0`, `p_b1`, `p_deltas`, `p_om`, and `p_rho` are never read --> src/model.rs:80:9 | 41 | pub struct Priors { | ------ fields in this struct ... 80 | pub p_b0: usize, | ^^^^ 81 | pub p_b1: usize, | ^^^^ 82 | pub p_deltas: Vec, | ^^^^^^^^ 83 | pub p_om: Vec, | ^^^^ 84 | pub p_rho: Vec, | ^^^^^ | = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default note: link against the following native artifacts when linking against this static library. The order and any duplication can be significant on some platforms note: native-static-libs: -lc -lm -lrt -lpthread -lR -lgcc_s -lutil -lrt -lpthread -lm -ldl -lc warning: `smoothbp` (lib) generated 2 warnings Finished `release` profile [optimized] target(s) in 2m 36s # Always clean up CARGOTMP rm -Rf /data/localhost/ripley/R/packages/tests-clang/smoothbp/src/.cargo; /usr/local/clang23/bin/clang-23 -std=gnu23 -shared -L/usr/local/clang/lib64 -L/usr/local/clang23/lib -L/usr/local/clang23/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o smoothbp.so entrypoint.o -L./rust/target/release -lsmoothbp rm -Rf /data/localhost/ripley/R/packages/tests-clang/smoothbp/src/.cargo /data/localhost/ripley/R/packages/tests-clang/smoothbp/src/vendor ./rust/target make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-clang/smoothbp/src' make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-clang/smoothbp/src' make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-clang/smoothbp/src' installing to /data/localhost/ripley/R/packages/tests-clang/smoothbp.Rcheck/00LOCK-smoothbp/00new/smoothbp/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (smoothbp)