* installing *source* package ‘sglOptim’ ...
** package ‘sglOptim’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 17.0.5’
make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/sglOptim/src'
/usr/local/clang17/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppProgress/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang17/include -I/usr/local/clang/include   -I'../inst/include' -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -c only_for_testing.cpp -o only_for_testing.o
In file included from only_for_testing.cpp:44:
In file included from ../inst/include/sgl.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppProgress/include/progress.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/RcppProgress/include/interruptable_progress_monitor.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/RcppProgress/include/interrupts.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp.h:27:
In file included from /data/gannet/ripley/R/test-clang/Rcpp/include/RcppCommon.h:128:
In file included from /data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp/routines.h:26:
/data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp/iostream/Rstreambuf.h:53:20: warning: field precision should have type 'int', but argument has type 'std::streamsize' (aka 'long') [-Wformat]
   53 |         Rprintf("%.*s", num, s);
      |                  ~~^~   ~~~
/data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp/iostream/Rstreambuf.h:57:21: warning: field precision should have type 'int', but argument has type 'std::streamsize' (aka 'long') [-Wformat]
   57 |         REprintf("%.*s", num, s);
      |                   ~~^~   ~~~
In file included from only_for_testing.cpp:44:
In file included from ../inst/include/sgl.h:25:
In file included from /data/gannet/ripley/R/test-clang/RcppProgress/include/progress.hpp:12:
In file included from /data/gannet/ripley/R/test-clang/RcppProgress/include/interruptable_progress_monitor.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/RcppProgress/include/interrupts.hpp:21:
In file included from /data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp.h:27:
In file included from /data/gannet/ripley/R/test-clang/Rcpp/include/RcppCommon.h:181:
/data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp/print.h:30:26: warning: format string is not a string literal (potentially insecure) [-Wformat-security]
   30 |     Rf_warningcall(call, s.c_str());
      |                          ^~~~~~~~~
/data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp/print.h:30:26: note: treat the string as an argument to avoid this
   30 |     Rf_warningcall(call, s.c_str());
      |                          ^
      |                          "%s", 
In file included from only_for_testing.cpp:44:
../inst/include/sgl.h:48:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
   48 | #define NDEBUG
      |         ^
<command line>:1:9: note: previous definition is here
    1 | #define NDEBUG 1
      |         ^
In file included from only_for_testing.cpp:44:
In file included from ../inst/include/sgl.h:84:
../inst/include/rtools.h:29:14: warning: format string is not a string literal (potentially insecure) [-Wformat-security]
   29 |     Rf_error(msg);
      |              ^~~
../inst/include/rtools.h:29:14: note: treat the string as an argument to avoid this
   29 |     Rf_error(msg);
      |              ^
      |              "%s", 
../inst/include/rtools.h:33:16: warning: format string is not a string literal (potentially insecure) [-Wformat-security]
   33 |     Rf_warning(msg);
      |                ^~~
../inst/include/rtools.h:33:16: note: treat the string as an argument to avoid this
   33 |     Rf_warning(msg);
      |                ^
      |                "%s", 
6 warnings generated.
/usr/local/clang17/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang17/lib -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o sglOptim.so only_for_testing.o -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lFortran_main -lFortranRuntime -lFortranDecimal -lm
make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/sglOptim/src'
make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/sglOptim/src'
make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/sglOptim/src'
installing to /data/gannet/ripley/R/packages/tests-clang/sglOptim.Rcheck/00LOCK-sglOptim/00new/sglOptim/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (sglOptim)