* installing *source* package ‘sdcMicro’ ...
** this is package ‘sdcMicro’ version ‘5.8.0’
** package ‘sdcMicro’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 21.1.8’
using C++ compiler: ‘clang version 21.1.8’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/sdcMicro/src'
/usr/local/clang21/bin/clang++ -std=gnu++20 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang21/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c 0Main.cpp -o 0Main.o
In file included from 0Main.cpp:43:
./RankSwapping.h:87:30: warning: arithmetic between enumeration type '(unnamed enum at 0Main.cpp:38:1)' and floating-point type 'double' is deprecated [-Wdeprecated-enum-float-conversion]
87 | DeltaV *= (es_NbHashList + 1.0) / es_NbHashList;
| ~~~~~~~~~~~~~ ^ ~~~
./RankSwapping.h:87:37: warning: arithmetic between floating-point type 'double' and enumeration type '(unnamed enum at 0Main.cpp:38:1)' is deprecated [-Wdeprecated-enum-float-conversion]
87 | DeltaV *= (es_NbHashList + 1.0) / es_NbHashList;
| ~~~~~~~~~~~~~~~~~~~~~ ^ ~~~~~~~~~~~~~
./RankSwapping.h:102:44: warning: arithmetic between enumeration type '(unnamed enum at 0Main.cpp:38:1)' and floating-point type 'double' is deprecated [-Wdeprecated-enum-float-conversion]
102 | int HashIndex = (int) (es_NbHashList * (MaxV - Value) / DeltaV);
| ~~~~~~~~~~~~~ ^ ~~~~~~~~~~~~~~
./RankSwapping.h:209:30: warning: arithmetic between enumeration type '(unnamed enum at 0Main.cpp:38:1)' and floating-point type 'double' is deprecated [-Wdeprecated-enum-float-conversion]
209 | DeltaV *= (es_NbHashList + 1.0) / es_NbHashList;
| ~~~~~~~~~~~~~ ^ ~~~
./RankSwapping.h:209:37: warning: arithmetic between floating-point type 'double' and enumeration type '(unnamed enum at 0Main.cpp:38:1)' is deprecated [-Wdeprecated-enum-float-conversion]
209 | DeltaV *= (es_NbHashList + 1.0) / es_NbHashList;
| ~~~~~~~~~~~~~~~~~~~~~ ^ ~~~~~~~~~~~~~
./RankSwapping.h:225:45: warning: arithmetic between enumeration type '(unnamed enum at 0Main.cpp:38:1)' and floating-point type 'double' is deprecated [-Wdeprecated-enum-float-conversion]
225 | int HashIndex = ((int) (es_NbHashList * (MaxV - Value) / DeltaV)) >> 1;
| ~~~~~~~~~~~~~ ^ ~~~~~~~~~~~~~~
In file included from 0Main.cpp:35:
./Framework.h:706:7: warning: unused function 'Strncpy' [-Wunused-function]
706 | char *Strncpy(char *Dst, const char *Src, int Max, BOOL Warn)
| ^~~~~~~
./Framework.h:716:7: warning: unused function 'ReplaceChar' [-Wunused-function]
716 | char *ReplaceChar(char *Str, char OldChar, char NewChar)
| ^~~~~~~~~~~
./Framework.h:731:7: warning: unused function 'Stristr' [-Wunused-function]
731 | char *Stristr(char *Ptr, char *SubString, BOOL LeaveAfter, BOOL ReturnNULL)
| ^~~~~~~
./Framework.h:753:7: warning: unused function 'RemoveComment' [-Wunused-function]
753 | char *RemoveComment(char *Ptr, int Size)
| ^~~~~~~~~~~~~
./Framework.h:804:7: warning: unused function 'GoToNextLine' [-Wunused-function]
804 | char *GoToNextLine(char *Ptr)
| ^~~~~~~~~~~~
./Framework.h:838:7: warning: unused function 'ParseString' [-Wunused-function]
838 | char *ParseString(char *Ptr, char *Str, int Size, BOOL AdvanceTo1stChar)
| ^~~~~~~~~~~
./Framework.h:892:7: warning: unused function 'ParseLine' [-Wunused-function]
892 | char *ParseLine(char *Ptr, char *Str, int Size, BOOL AdvanceTo1stChar)
| ^~~~~~~~~
/usr/local/clang21/bin/clang++ -std=gnu++20 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang21/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c LocalRecProg_cpp.cpp -o LocalRecProg_cpp.o
13 warnings generated.
/usr/local/clang21/bin/clang++ -std=gnu++20 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang21/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c Mdav.cpp -o Mdav.o
LocalRecProg_cpp.cpp:154:7: warning: misleading indentation; statement is not part of the previous 'else' [-Wmisleading-indentation]
154 | NSComplete::weighted(g_Vertex, g_NbRow_LocRec, g_Vertex + g_NbRow_LocRec);
| ^
LocalRecProg_cpp.cpp:149:5: note: previous statement is here
149 | else
| ^
In file included from LocalRecProg_cpp.cpp:17:
In file included from ./Mdav.h:24:
./Framework.h:706:7: warning: unused function 'Strncpy' [-Wunused-function]
706 | char *Strncpy(char *Dst, const char *Src, int Max, BOOL Warn)
| ^~~~~~~
./Framework.h:716:7: warning: unused function 'ReplaceChar' [-Wunused-function]
716 | char *ReplaceChar(char *Str, char OldChar, char NewChar)
| ^~~~~~~~~~~
./Framework.h:731:7: warning: unused function 'Stristr' [-Wunused-function]
731 | char *Stristr(char *Ptr, char *SubString, BOOL LeaveAfter, BOOL ReturnNULL)
| ^~~~~~~
./Framework.h:753:7: warning: unused function 'RemoveComment' [-Wunused-function]
753 | char *RemoveComment(char *Ptr, int Size)
| ^~~~~~~~~~~~~
./Framework.h:804:7: warning: unused function 'GoToNextLine' [-Wunused-function]
804 | char *GoToNextLine(char *Ptr)
| ^~~~~~~~~~~~
./Framework.h:838:7: warning: unused function 'ParseString' [-Wunused-function]
838 | char *ParseString(char *Ptr, char *Str, int Size, BOOL AdvanceTo1stChar)
| ^~~~~~~~~~~
./Framework.h:892:7: warning: unused function 'ParseLine' [-Wunused-function]
892 | char *ParseLine(char *Ptr, char *Str, int Size, BOOL AdvanceTo1stChar)
| ^~~~~~~~~
./Framework.h:987:6: warning: unused function 'TimeGetMilliSecond' [-Wunused-function]
987 | uint TimeGetMilliSecond(void)
| ^~~~~~~~~~~~~~~~~~
9 warnings generated.
/usr/local/clang21/bin/clang++ -std=gnu++20 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang21/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c RcppExports.cpp -o RcppExports.o
Mdav.cpp:183:34: warning: arithmetic between enumeration type '(unnamed enum at ./Mdav.h:27:1)' and floating-point type 'double' is deprecated [-Wdeprecated-enum-float-conversion]
183 | DeltaD *= (es_NbHashListXX + 1.0) / es_NbHashListXX;
| ~~~~~~~~~~~~~~~ ^ ~~~
Mdav.cpp:183:41: warning: arithmetic between floating-point type 'double' and enumeration type '(unnamed enum at ./Mdav.h:27:1)' is deprecated [-Wdeprecated-enum-float-conversion]
183 | DeltaD *= (es_NbHashListXX + 1.0) / es_NbHashListXX;
| ~~~~~~~~~~~~~~~~~~~~~~~ ^ ~~~~~~~~~~~~~~~
Mdav.cpp:189:48: warning: arithmetic between enumeration type '(unnamed enum at ./Mdav.h:27:1)' and floating-point type 'TDist' (aka 'float') is deprecated [-Wdeprecated-enum-float-conversion]
189 | int HashIndex = (int) (es_NbHashListXX * (Dist - MinD) / DeltaD);
| ~~~~~~~~~~~~~~~ ^ ~~~~~~~~~~~~~
In file included from Mdav.cpp:25:
./Framework.h:706:7: warning: unused function 'Strncpy' [-Wunused-function]
706 | char *Strncpy(char *Dst, const char *Src, int Max, BOOL Warn)
| ^~~~~~~
./Framework.h:716:7: warning: unused function 'ReplaceChar' [-Wunused-function]
716 | char *ReplaceChar(char *Str, char OldChar, char NewChar)
| ^~~~~~~~~~~
./Framework.h:731:7: warning: unused function 'Stristr' [-Wunused-function]
731 | char *Stristr(char *Ptr, char *SubString, BOOL LeaveAfter, BOOL ReturnNULL)
| ^~~~~~~
./Framework.h:753:7: warning: unused function 'RemoveComment' [-Wunused-function]
753 | char *RemoveComment(char *Ptr, int Size)
| ^~~~~~~~~~~~~
./Framework.h:804:7: warning: unused function 'GoToNextLine' [-Wunused-function]
804 | char *GoToNextLine(char *Ptr)
| ^~~~~~~~~~~~
./Framework.h:838:7: warning: unused function 'ParseString' [-Wunused-function]
838 | char *ParseString(char *Ptr, char *Str, int Size, BOOL AdvanceTo1stChar)
| ^~~~~~~~~~~
./Framework.h:892:7: warning: unused function 'ParseLine' [-Wunused-function]
892 | char *ParseLine(char *Ptr, char *Str, int Size, BOOL AdvanceTo1stChar)
| ^~~~~~~~~
./Framework.h:987:6: warning: unused function 'TimeGetMilliSecond' [-Wunused-function]
987 | uint TimeGetMilliSecond(void)
| ^~~~~~~~~~~~~~~~~~
11 warnings generated.
/usr/local/clang21/bin/clang++ -std=gnu++20 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang21/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c calcSuppInds.cpp -o calcSuppInds.o
/usr/local/clang21/bin/clang++ -std=gnu++20 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang21/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c microAggregation.cpp -o microAggregation.o
/usr/local/clang21/bin/clang++ -std=gnu++20 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang21/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c muargus_microaggregation.cpp -o muargus_microaggregation.o
/usr/local/clang21/bin/clang++ -std=gnu++20 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang21/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c muargus_rankswap.cpp -o muargus_rankswap.o
/usr/local/clang21/bin/clang++ -std=gnu++20 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang21/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c rankSwap.cpp -o rankSwap.o
/usr/local/clang21/bin/clang++ -std=gnu++20 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang21/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c recordSwap_R.cpp -o recordSwap_R.o
/usr/local/clang21/bin/clang -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang21/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sdcMicro.c -o sdcMicro.o
/usr/local/clang21/bin/clang++ -std=gnu++20 -shared -L/usr/local/clang/lib64 -L/usr/local/clang21/lib -L/usr/local/clang21/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o sdcMicro.so 0Main.o LocalRecProg_cpp.o Mdav.o RcppExports.o calcSuppInds.o microAggregation.o muargus_microaggregation.o muargus_rankswap.o rankSwap.o recordSwap_R.o sdcMicro.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/sdcMicro/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/sdcMicro/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/sdcMicro/src'
installing to /data/gannet/ripley/R/packages/tests-clang/sdcMicro.Rcheck/00LOCK-sdcMicro/00new/sdcMicro/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (sdcMicro)