- using R Under development (unstable) (2025-10-22 r88968)
 
- using platform: x86_64-pc-linux-gnu
 
- R was compiled by
    clang version 21.1.4
    flang version 21.1.4
 
- running under: Fedora Linux 42 (Workstation Edition)
 
- using session charset: UTF-8
 
- using option ‘--no-stop-on-test-error’
 
- checking for file ‘scUtils/DESCRIPTION’ ... OK
 
- checking extension type ... Package
 
- this is package ‘scUtils’ version ‘0.1.0’
 
- package encoding: UTF-8
 
- checking package namespace information ... OK
 
- checking package dependencies ... OK
 
- checking if this is a source package ... OK
 
- checking if there is a namespace ... OK
 
- checking for executable files ... OK
 
- checking for hidden files and directories ... OK
 
- checking for portable file names ... OK
 
- checking for sufficient/correct file permissions ... OK
 
- checking whether package ‘scUtils’ can be installed ... [11s/15s] OK
See the install log for details.
 
- checking installed package size ... OK
 
- checking package directory ... OK
 
- checking DESCRIPTION meta-information ... OK
 
- checking top-level files ... OK
 
- checking for left-over files ... OK
 
- checking index information ... OK
 
- checking package subdirectories ... OK
 
- checking code files for non-ASCII characters ... OK
 
- checking R files for syntax errors ... OK
 
- checking whether the package can be loaded ... OK
 
- checking whether the package can be loaded with stated dependencies ... OK
 
- checking whether the package can be unloaded cleanly ... OK
 
- checking whether the namespace can be loaded with stated dependencies ... OK
 
- checking whether the namespace can be unloaded cleanly ... OK
 
- checking loading without being on the library search path ... OK
 
- checking use of S3 registration ... OK
 
- checking dependencies in R code ... OK
 
- checking S3 generic/method consistency ... OK
 
- checking replacement functions ... OK
 
- checking foreign function calls ... OK
 
- checking R code for possible problems ... [14s/20s] OK
 
- checking Rd files ... OK
 
- checking Rd metadata ... OK
 
- checking Rd line widths ... OK
 
- checking Rd cross-references ... OK
 
- checking for missing documentation entries ... OK
 
- checking for code/documentation mismatches ... OK
 
- checking Rd \usage sections ... OK
 
- checking Rd contents ... OK
 
- checking for unstated dependencies in examples ... OK
 
- checking LazyData ... INFO
  'LazyData' is specified without a 'data' directory
 
- checking examples ... OK
 
- checking for unstated dependencies in ‘tests’ ... OK
 
- checking tests ... [12s/18s] ERROR
  Running ‘testthat.R’ [11s/17s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(scUtils)
  > 
  > test_check("scUtils")
  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 32 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-plots.R:59:3'): all kinds of colnames are allowed ────────────
  p$labels not equal to list(y = "Dim2", x = "Dim1", colour = "expression").
  Attributes: < names for target but not for current >
  Attributes: < Length mismatch: comparison on first 0 components >
  Length mismatch: comparison on first 2 components
  
  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 32 ]
  Error: Test failures
  Execution halted
 
- checking PDF version of manual ... OK
 
- checking HTML version of manual ... OK
 
- checking for non-standard things in the check directory ... OK
 
- checking for detritus in the temp directory ... OK
 
- DONE
 
Status: 1 ERROR