* installing *source* package ‘scModels’ ...
** this is package ‘scModels’ version ‘1.0.5’
** package ‘scModels’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 22.1.7 (https://github.com/llvm/llvm-project a255c1ed36a1d06f79bd2633ba9f8d900153007c)’
using C++ compiler: ‘clang version 22.1.7 (https://github.com/llvm/llvm-project a255c1ed36a1d06f79bd2633ba9f8d900153007c)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/scModels/src'
clang++-22 -stdlib=libc++ -std=gnu++20 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang22/include -I/usr/local/clang/include   `/data/gannet/ripley/R/R-clang/bin/Rscript -e "Rcpp:::CxxFlags()"` -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw   -c RcppExports.cpp -o RcppExports.o
'CxxFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
clang++-22 -stdlib=libc++ -std=gnu++20 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang22/include -I/usr/local/clang/include   `/data/gannet/ripley/R/R-clang/bin/Rscript -e "Rcpp:::CxxFlags()"` -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw   -c gillespie.cpp -o gillespie.o
'CxxFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
clang++-22 -stdlib=libc++ -std=gnu++20 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang22/include -I/usr/local/clang/include   `/data/gannet/ripley/R/R-clang/bin/Rscript -e "Rcpp:::CxxFlags()"` -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw   -c pb.cpp -o pb.o
'CxxFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
clang-22 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang22/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c scModels_init.c -o scModels_init.o
clang++-22 -stdlib=libc++ -std=gnu++20 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang22/include -I/usr/local/clang/include   `/data/gannet/ripley/R/R-clang/bin/Rscript -e "Rcpp:::CxxFlags()"` -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw   -c shared.cpp -o shared.o
'CxxFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
clang++-22 -stdlib=libc++ -std=gnu++20 -shared -L/usr/local/clang/lib64 -L/usr/local/clang22/lib -L/usr/local/clang22/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o scModels.so RcppExports.o gillespie.o pb.o scModels_init.o shared.o -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lflang_rt.runtime -lm -lmpfr -lgmp
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/scModels/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/scModels/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/scModels/src'
installing to /data/gannet/ripley/R/packages/tests-clang/scModels.Rcheck/00LOCK-scModels/00new/scModels/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (scModels)