* installing *source* package ‘rxode2ll’ ...
** package ‘rxode2ll’ successfully unpacked and MD5 sums checked
** using staged installation
--------[begin src/Makevars]--------
# -*- mode: makefile-gmake -*-
BH=/data/gannet/ripley/R/test-clang/BH/include
RCPP=/data/gannet/ripley/R/test-clang/Rcpp/include
EG=/data/gannet/ripley/R/test-clang/RcppEigen/include
SH=-isystem'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS    -isystem'/data/gannet/ripley/R/test-clang/StanHeaders/include/src' 
CXX_STD = CXX17
################################################################################
## Package library flags.
PKG_LIBS    = $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS) $(SHLIB_OPENMP_CXXFLAGS) -L'/data/gannet/ripley/R/test-clang/RcppParallel/lib/' -Wl,-rpath,'/data/gannet/ripley/R/test-clang/RcppParallel/lib/' -ltbb -ltbbmalloc   

# Release options
PKG_CFLAGS  =  -D_isrxode2parse_
PKG_CXXFLAGS = $(SHLIB_OPENMP_CXXFLAGS) -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"$(BH)" -isystem"$(EG)" $(SH) -isystem"$(RCPP)"


--------[end src/Makevars]--------
** libs
using C compiler: ‘clang version 18.1.2’
using C++ compiler: ‘clang version 18.1.2’
using C++17
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/rxode2ll/src'
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/data/gannet/ripley/R/test-clang/BH/include" -isystem"/data/gannet/ripley/R/test-clang/RcppEigen/include" -isystem'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS    -isystem'/data/gannet/ripley/R/test-clang/StanHeaders/include/src'  -isystem"/data/gannet/ripley/R/test-clang/Rcpp/include" -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c RcppExports.cpp -o RcppExports.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -D_isrxode2parse_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c init.c -o init.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/data/gannet/ripley/R/test-clang/BH/include" -isystem"/data/gannet/ripley/R/test-clang/RcppEigen/include" -isystem'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS    -isystem'/data/gannet/ripley/R/test-clang/StanHeaders/include/src'  -isystem"/data/gannet/ripley/R/test-clang/Rcpp/include" -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c llikBeta.cpp -o llikBeta.o
In file included from llikBeta.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
   57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
      | ^
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
   45 | class ops_partials_edge;
      | ^~~~~
      | struct
In file included from llikBeta.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:34:
/usr/local/clang/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
  166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikBeta.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
/usr/local/clang/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
  125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikBeta.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
In file included from /usr/local/clang/include/boost/units/detail/dimension_list.hpp:131:
/usr/local/clang/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
   49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikBeta.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:39:
In file included from /usr/local/clang/include/boost/units/detail/linear_algebra.hpp:20:
/usr/local/clang/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
   75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikBeta.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:40:
In file included from /usr/local/clang/include/boost/units/detail/unscale.hpp:28:
/usr/local/clang/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
  139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikBeta.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
/usr/local/clang/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
  120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikBeta.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:21:
/usr/local/clang/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
   99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikBeta.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/usr/local/clang/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
  495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
9 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/data/gannet/ripley/R/test-clang/BH/include" -isystem"/data/gannet/ripley/R/test-clang/RcppEigen/include" -isystem'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS    -isystem'/data/gannet/ripley/R/test-clang/StanHeaders/include/src'  -isystem"/data/gannet/ripley/R/test-clang/Rcpp/include" -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c llikBinom.cpp -o llikBinom.o
In file included from llikBinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
   57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
      | ^
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
   45 | class ops_partials_edge;
      | ^~~~~
      | struct
In file included from llikBinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:34:
/usr/local/clang/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
  166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikBinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
/usr/local/clang/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
  125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikBinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
In file included from /usr/local/clang/include/boost/units/detail/dimension_list.hpp:131:
/usr/local/clang/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
   49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikBinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:39:
In file included from /usr/local/clang/include/boost/units/detail/linear_algebra.hpp:20:
/usr/local/clang/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
   75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikBinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:40:
In file included from /usr/local/clang/include/boost/units/detail/unscale.hpp:28:
/usr/local/clang/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
  139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikBinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
/usr/local/clang/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
  120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikBinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:21:
/usr/local/clang/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
   99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikBinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/usr/local/clang/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
  495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
9 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/data/gannet/ripley/R/test-clang/BH/include" -isystem"/data/gannet/ripley/R/test-clang/RcppEigen/include" -isystem'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS    -isystem'/data/gannet/ripley/R/test-clang/StanHeaders/include/src'  -isystem"/data/gannet/ripley/R/test-clang/Rcpp/include" -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c llikCauchy.cpp -o llikCauchy.o
In file included from llikCauchy.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
   57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
      | ^
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
   45 | class ops_partials_edge;
      | ^~~~~
      | struct
In file included from llikCauchy.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:34:
/usr/local/clang/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
  166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikCauchy.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
/usr/local/clang/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
  125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikCauchy.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
In file included from /usr/local/clang/include/boost/units/detail/dimension_list.hpp:131:
/usr/local/clang/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
   49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikCauchy.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:39:
In file included from /usr/local/clang/include/boost/units/detail/linear_algebra.hpp:20:
/usr/local/clang/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
   75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikCauchy.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:40:
In file included from /usr/local/clang/include/boost/units/detail/unscale.hpp:28:
/usr/local/clang/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
  139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikCauchy.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
/usr/local/clang/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
  120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikCauchy.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:21:
/usr/local/clang/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
   99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikCauchy.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/usr/local/clang/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
  495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
9 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/data/gannet/ripley/R/test-clang/BH/include" -isystem"/data/gannet/ripley/R/test-clang/RcppEigen/include" -isystem'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS    -isystem'/data/gannet/ripley/R/test-clang/StanHeaders/include/src'  -isystem"/data/gannet/ripley/R/test-clang/Rcpp/include" -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c llikChisq.cpp -o llikChisq.o
In file included from llikChisq.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
   57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
      | ^
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
   45 | class ops_partials_edge;
      | ^~~~~
      | struct
In file included from llikChisq.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:34:
/usr/local/clang/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
  166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikChisq.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
/usr/local/clang/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
  125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikChisq.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
In file included from /usr/local/clang/include/boost/units/detail/dimension_list.hpp:131:
/usr/local/clang/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
   49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikChisq.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:39:
In file included from /usr/local/clang/include/boost/units/detail/linear_algebra.hpp:20:
/usr/local/clang/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
   75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikChisq.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:40:
In file included from /usr/local/clang/include/boost/units/detail/unscale.hpp:28:
/usr/local/clang/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
  139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikChisq.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
/usr/local/clang/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
  120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikChisq.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:21:
/usr/local/clang/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
   99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikChisq.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/usr/local/clang/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
  495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
9 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/data/gannet/ripley/R/test-clang/BH/include" -isystem"/data/gannet/ripley/R/test-clang/RcppEigen/include" -isystem'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS    -isystem'/data/gannet/ripley/R/test-clang/StanHeaders/include/src'  -isystem"/data/gannet/ripley/R/test-clang/Rcpp/include" -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c llikExp.cpp -o llikExp.o
In file included from llikExp.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
   57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
      | ^
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
   45 | class ops_partials_edge;
      | ^~~~~
      | struct
In file included from llikExp.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:34:
/usr/local/clang/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
  166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikExp.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
/usr/local/clang/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
  125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikExp.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
In file included from /usr/local/clang/include/boost/units/detail/dimension_list.hpp:131:
/usr/local/clang/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
   49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikExp.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:39:
In file included from /usr/local/clang/include/boost/units/detail/linear_algebra.hpp:20:
/usr/local/clang/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
   75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikExp.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:40:
In file included from /usr/local/clang/include/boost/units/detail/unscale.hpp:28:
/usr/local/clang/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
  139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikExp.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
/usr/local/clang/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
  120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikExp.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:21:
/usr/local/clang/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
   99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikExp.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/usr/local/clang/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
  495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
9 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/data/gannet/ripley/R/test-clang/BH/include" -isystem"/data/gannet/ripley/R/test-clang/RcppEigen/include" -isystem'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS    -isystem'/data/gannet/ripley/R/test-clang/StanHeaders/include/src'  -isystem"/data/gannet/ripley/R/test-clang/Rcpp/include" -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c llikF.cpp -o llikF.o
In file included from llikF.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
   57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
      | ^
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
   45 | class ops_partials_edge;
      | ^~~~~
      | struct
In file included from llikF.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:34:
/usr/local/clang/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
  166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikF.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
/usr/local/clang/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
  125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikF.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
In file included from /usr/local/clang/include/boost/units/detail/dimension_list.hpp:131:
/usr/local/clang/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
   49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikF.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:39:
In file included from /usr/local/clang/include/boost/units/detail/linear_algebra.hpp:20:
/usr/local/clang/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
   75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikF.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:40:
In file included from /usr/local/clang/include/boost/units/detail/unscale.hpp:28:
/usr/local/clang/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
  139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikF.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
/usr/local/clang/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
  120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikF.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:21:
/usr/local/clang/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
   99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikF.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/usr/local/clang/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
  495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
9 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/data/gannet/ripley/R/test-clang/BH/include" -isystem"/data/gannet/ripley/R/test-clang/RcppEigen/include" -isystem'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS    -isystem'/data/gannet/ripley/R/test-clang/StanHeaders/include/src'  -isystem"/data/gannet/ripley/R/test-clang/Rcpp/include" -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c llikGamma.cpp -o llikGamma.o
In file included from llikGamma.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
   57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
      | ^
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
   45 | class ops_partials_edge;
      | ^~~~~
      | struct
In file included from llikGamma.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:34:
/usr/local/clang/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
  166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikGamma.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
/usr/local/clang/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
  125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikGamma.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
In file included from /usr/local/clang/include/boost/units/detail/dimension_list.hpp:131:
/usr/local/clang/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
   49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikGamma.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:39:
In file included from /usr/local/clang/include/boost/units/detail/linear_algebra.hpp:20:
/usr/local/clang/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
   75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikGamma.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:40:
In file included from /usr/local/clang/include/boost/units/detail/unscale.hpp:28:
/usr/local/clang/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
  139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikGamma.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
/usr/local/clang/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
  120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikGamma.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:21:
/usr/local/clang/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
   99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikGamma.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/usr/local/clang/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
  495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
9 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/data/gannet/ripley/R/test-clang/BH/include" -isystem"/data/gannet/ripley/R/test-clang/RcppEigen/include" -isystem'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS    -isystem'/data/gannet/ripley/R/test-clang/StanHeaders/include/src'  -isystem"/data/gannet/ripley/R/test-clang/Rcpp/include" -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c llikGeom.cpp -o llikGeom.o
In file included from llikGeom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
   57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
      | ^
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
   45 | class ops_partials_edge;
      | ^~~~~
      | struct
In file included from llikGeom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:34:
/usr/local/clang/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
  166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikGeom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
/usr/local/clang/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
  125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikGeom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
In file included from /usr/local/clang/include/boost/units/detail/dimension_list.hpp:131:
/usr/local/clang/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
   49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikGeom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:39:
In file included from /usr/local/clang/include/boost/units/detail/linear_algebra.hpp:20:
/usr/local/clang/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
   75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikGeom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:40:
In file included from /usr/local/clang/include/boost/units/detail/unscale.hpp:28:
/usr/local/clang/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
  139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikGeom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
/usr/local/clang/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
  120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikGeom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:21:
/usr/local/clang/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
   99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikGeom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/usr/local/clang/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
  495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
9 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/data/gannet/ripley/R/test-clang/BH/include" -isystem"/data/gannet/ripley/R/test-clang/RcppEigen/include" -isystem'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS    -isystem'/data/gannet/ripley/R/test-clang/StanHeaders/include/src'  -isystem"/data/gannet/ripley/R/test-clang/Rcpp/include" -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c llikNbinom.cpp -o llikNbinom.o
In file included from llikNbinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
   57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
      | ^
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
   45 | class ops_partials_edge;
      | ^~~~~
      | struct
In file included from llikNbinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:34:
/usr/local/clang/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
  166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNbinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
/usr/local/clang/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
  125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNbinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
In file included from /usr/local/clang/include/boost/units/detail/dimension_list.hpp:131:
/usr/local/clang/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
   49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNbinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:39:
In file included from /usr/local/clang/include/boost/units/detail/linear_algebra.hpp:20:
/usr/local/clang/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
   75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNbinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:40:
In file included from /usr/local/clang/include/boost/units/detail/unscale.hpp:28:
/usr/local/clang/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
  139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNbinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
/usr/local/clang/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
  120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNbinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:21:
/usr/local/clang/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
   99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNbinom.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/usr/local/clang/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
  495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
9 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/data/gannet/ripley/R/test-clang/BH/include" -isystem"/data/gannet/ripley/R/test-clang/RcppEigen/include" -isystem'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS    -isystem'/data/gannet/ripley/R/test-clang/StanHeaders/include/src'  -isystem"/data/gannet/ripley/R/test-clang/Rcpp/include" -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c llikNbinom2.cpp -o llikNbinom2.o
In file included from llikNbinom2.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
   57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
      | ^
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
   45 | class ops_partials_edge;
      | ^~~~~
      | struct
In file included from llikNbinom2.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:34:
/usr/local/clang/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
  166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNbinom2.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
/usr/local/clang/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
  125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNbinom2.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
In file included from /usr/local/clang/include/boost/units/detail/dimension_list.hpp:131:
/usr/local/clang/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
   49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNbinom2.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:39:
In file included from /usr/local/clang/include/boost/units/detail/linear_algebra.hpp:20:
/usr/local/clang/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
   75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNbinom2.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:40:
In file included from /usr/local/clang/include/boost/units/detail/unscale.hpp:28:
/usr/local/clang/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
  139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNbinom2.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
/usr/local/clang/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
  120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNbinom2.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:21:
/usr/local/clang/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
   99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNbinom2.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/usr/local/clang/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
  495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
9 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/data/gannet/ripley/R/test-clang/BH/include" -isystem"/data/gannet/ripley/R/test-clang/RcppEigen/include" -isystem'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS    -isystem'/data/gannet/ripley/R/test-clang/StanHeaders/include/src'  -isystem"/data/gannet/ripley/R/test-clang/Rcpp/include" -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c llikNorm.cpp -o llikNorm.o
In file included from llikNorm.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
   57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
      | ^
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
   45 | class ops_partials_edge;
      | ^~~~~
      | struct
In file included from llikNorm.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:34:
/usr/local/clang/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
  166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNorm.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
/usr/local/clang/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
  125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNorm.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
In file included from /usr/local/clang/include/boost/units/detail/dimension_list.hpp:131:
/usr/local/clang/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
   49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNorm.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:39:
In file included from /usr/local/clang/include/boost/units/detail/linear_algebra.hpp:20:
/usr/local/clang/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
   75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNorm.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:40:
In file included from /usr/local/clang/include/boost/units/detail/unscale.hpp:28:
/usr/local/clang/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
  139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNorm.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
/usr/local/clang/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
  120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNorm.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:21:
/usr/local/clang/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
   99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikNorm.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/usr/local/clang/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
  495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
9 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/data/gannet/ripley/R/test-clang/BH/include" -isystem"/data/gannet/ripley/R/test-clang/RcppEigen/include" -isystem'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS    -isystem'/data/gannet/ripley/R/test-clang/StanHeaders/include/src'  -isystem"/data/gannet/ripley/R/test-clang/Rcpp/include" -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c llikPois.cpp -o llikPois.o
In file included from llikPois.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
   57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
      | ^
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
   45 | class ops_partials_edge;
      | ^~~~~
      | struct
In file included from llikPois.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:34:
/usr/local/clang/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
  166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikPois.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
/usr/local/clang/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
  125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikPois.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
In file included from /usr/local/clang/include/boost/units/detail/dimension_list.hpp:131:
/usr/local/clang/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
   49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikPois.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:39:
In file included from /usr/local/clang/include/boost/units/detail/linear_algebra.hpp:20:
/usr/local/clang/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
   75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikPois.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:40:
In file included from /usr/local/clang/include/boost/units/detail/unscale.hpp:28:
/usr/local/clang/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
  139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikPois.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
/usr/local/clang/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
  120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikPois.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:21:
/usr/local/clang/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
   99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikPois.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/usr/local/clang/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
  495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
9 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/data/gannet/ripley/R/test-clang/BH/include" -isystem"/data/gannet/ripley/R/test-clang/RcppEigen/include" -isystem'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS    -isystem'/data/gannet/ripley/R/test-clang/StanHeaders/include/src'  -isystem"/data/gannet/ripley/R/test-clang/Rcpp/include" -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c llikT.cpp -o llikT.o
In file included from llikT.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
   57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
      | ^
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
   45 | class ops_partials_edge;
      | ^~~~~
      | struct
In file included from llikT.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:34:
/usr/local/clang/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
  166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikT.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
/usr/local/clang/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
  125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikT.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
In file included from /usr/local/clang/include/boost/units/detail/dimension_list.hpp:131:
/usr/local/clang/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
   49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikT.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:39:
In file included from /usr/local/clang/include/boost/units/detail/linear_algebra.hpp:20:
/usr/local/clang/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
   75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikT.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:40:
In file included from /usr/local/clang/include/boost/units/detail/unscale.hpp:28:
/usr/local/clang/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
  139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikT.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
/usr/local/clang/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
  120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikT.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:21:
/usr/local/clang/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
   99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikT.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/usr/local/clang/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
  495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
9 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/data/gannet/ripley/R/test-clang/BH/include" -isystem"/data/gannet/ripley/R/test-clang/RcppEigen/include" -isystem'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS    -isystem'/data/gannet/ripley/R/test-clang/StanHeaders/include/src'  -isystem"/data/gannet/ripley/R/test-clang/Rcpp/include" -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c llikUnif.cpp -o llikUnif.o
In file included from llikUnif.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
   57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
      | ^
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
   45 | class ops_partials_edge;
      | ^~~~~
      | struct
In file included from llikUnif.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:34:
/usr/local/clang/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
  166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikUnif.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
/usr/local/clang/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
  125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikUnif.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
In file included from /usr/local/clang/include/boost/units/detail/dimension_list.hpp:131:
/usr/local/clang/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
   49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikUnif.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:39:
In file included from /usr/local/clang/include/boost/units/detail/linear_algebra.hpp:20:
/usr/local/clang/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
   75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikUnif.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:40:
In file included from /usr/local/clang/include/boost/units/detail/unscale.hpp:28:
/usr/local/clang/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
  139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikUnif.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
/usr/local/clang/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
  120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikUnif.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:21:
/usr/local/clang/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
   99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikUnif.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/usr/local/clang/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
  495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
9 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/StanHeaders/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/data/gannet/ripley/R/test-clang/BH/include" -isystem"/data/gannet/ripley/R/test-clang/RcppEigen/include" -isystem'/data/gannet/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS    -isystem'/data/gannet/ripley/R/test-clang/StanHeaders/include/src'  -isystem"/data/gannet/ripley/R/test-clang/Rcpp/include" -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c llikWeibull.cpp -o llikWeibull.o
In file included from llikWeibull.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:56:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/elt_multiply.hpp:9:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun/multiply.hpp:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:35:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8:
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
   57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> {
      | ^
/data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here?
   45 | class ops_partials_edge;
      | ^~~~~
      | struct
In file included from llikWeibull.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:34:
/usr/local/clang/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
  166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikWeibull.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
/usr/local/clang/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
  125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikWeibull.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:35:
In file included from /usr/local/clang/include/boost/units/dimension.hpp:21:
In file included from /usr/local/clang/include/boost/units/detail/dimension_list.hpp:131:
/usr/local/clang/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
   49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikWeibull.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:39:
In file included from /usr/local/clang/include/boost/units/detail/linear_algebra.hpp:20:
/usr/local/clang/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
   75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikWeibull.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /usr/local/clang/include/boost/units/heterogeneous_system.hpp:40:
In file included from /usr/local/clang/include/boost/units/detail/unscale.hpp:28:
/usr/local/clang/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
  139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikWeibull.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:20:
/usr/local/clang/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
  120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikWeibull.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /usr/local/clang/include/boost/units/quantity.hpp:29:
In file included from /usr/local/clang/include/boost/units/conversion.hpp:17:
In file included from /usr/local/clang/include/boost/units/detail/conversion_impl.hpp:21:
/usr/local/clang/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
   99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
In file included from llikWeibull.cpp:1:
In file included from ./llik2.h:7:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math.hpp:19:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/rev/fun.hpp:200:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /usr/local/clang/include/boost/numeric/odeint.hpp:25:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /usr/local/clang/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /usr/local/clang/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/usr/local/clang/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
  495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
      |          ^
/usr/local/clang/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
  197 |      <boost/typeof/incr_registration_group.hpp>
      |             ^
9 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o rxode2ll.so RcppExports.o init.o llikBeta.o llikBinom.o llikCauchy.o llikChisq.o llikExp.o llikF.o llikGamma.o llikGeom.o llikNbinom.o llikNbinom2.o llikNorm.o llikPois.o llikT.o llikUnif.o llikWeibull.o -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lFortran_main -lFortranRuntime -lFortranDecimal -lm -fopenmp -L/data/gannet/ripley/R/test-clang/RcppParallel/lib/ -Wl,-rpath,/data/gannet/ripley/R/test-clang/RcppParallel/lib/ -ltbb -ltbbmalloc
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/rxode2ll/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/rxode2ll/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/rxode2ll/src'
installing to /data/gannet/ripley/R/packages/tests-clang/rxode2ll.Rcheck/00LOCK-rxode2ll/00new/rxode2ll/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rxode2ll)