* installing *source* package ‘rtmpt’ ...
** this is package ‘rtmpt’ version ‘2.1-1’
** package ‘rtmpt’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 23.1.1’
using C++ compiler: ‘clang version 23.1.1’
make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-clang/rtmpt/src'
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c Quelle.cpp -o Quelle.o
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c adaptive_rejection_sampling.cpp -o adaptive_rejection_sampling.o
adaptive_rejection_sampling.cpp:166:8: warning: unused variable 'cnt_while' [-Wunused-variable]
166 | int cnt_while = 0;
| ^~~~~~~~~
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c additions.cpp -o additions.o
1 warning generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c derivatives.cpp -o derivatives.o
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c diagnosis.cpp -o diagnosis.o
diagnosis.cpp:1243:9: warning: unused variable 'exit_status' [-Wunused-variable]
1243 | int exit_status = 1;
| ^~~~~~~~~~~
diagnosis.cpp:1485:9: warning: unused variable 'exit_status' [-Wunused-variable]
1485 | int exit_status = 0;
| ^~~~~~~~~~~
2 warnings generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c diffusion.cpp -o diffusion.o
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c gibbs.cpp -o gibbs.o
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c hamiltonian.cpp -o hamiltonian.o
gibbs.cpp:255:12: warning: unused variable 'epsm' [-Wunused-variable]
255 | double epsm = 0.0; double activeeps = xeps; double Hobjective = 0.0;
| ^~~~
gibbs.cpp:255:56: warning: unused variable 'Hobjective' [-Wunused-variable]
255 | double epsm = 0.0; double activeeps = xeps; double Hobjective = 0.0;
| ^~~~~~~~~~
gibbs.cpp:256:12: warning: unused variable 'liknorm' [-Wunused-variable]
256 | double liknorm[6] = { 0 * 6 };
| ^~~~~~~
gibbs.cpp:286:46: warning: variable 'epshelp' set but not used [-Wunused-but-set-variable]
286 | double rmax = 0.0; int imax = -1; double epshelp;
| ^
4 warnings generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c hcubature.cpp -o hcubature.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c invtri.c -o invtri.o
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c joint.cpp -o joint.o
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c lkj.cpp -o lkj.o
lkj.cpp:90:8: warning: variable 'offset2' set but not used [-Wunused-but-set-variable]
90 | int offset2 = nhamil;
| ^
1 warning generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c lnnorm.cpp -o lnnorm.o
lnnorm.cpp:31:13: warning: variable 'upper' set but not used [-Wunused-but-set-variable]
31 | int upper, lower ;
| ^
1 warning generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c main.cpp -o main.o
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c mvtimes.cpp -o mvtimes.o
mvtimes.cpp:1479:9: warning: variable 'acc' set but not used [-Wunused-but-set-variable]
1479 | int acc = 0;
| ^
1 warning generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c onetimes.cpp -o onetimes.o
onetimes.cpp:140:21: warning: equality comparison with extraneous parentheses [-Wparentheses-equality]
140 | if ((complength == 1) /*&& (PFAD_INDEX(j, k) > -1)*/) {
| ~~~~~~~~~~~^~~~
onetimes.cpp:140:21: note: remove extraneous parentheses around the comparison to silence this warning
140 | if ((complength == 1) /*&& (PFAD_INDEX(j, k) > -1)*/) {
| ~ ^ ~
onetimes.cpp:140:21: note: use '=' to turn this equality comparison into an assignment
140 | if ((complength == 1) /*&& (PFAD_INDEX(j, k) > -1)*/) {
| ^~
| =
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c r_wrapper.cpp -o r_wrapper.o
1 warning generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c rtimes.cpp -o rtimes.o
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c rtmpt_init.c -o rtmpt_init.o
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c rwiener.cpp -o rwiener.o
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c specifics.cpp -o specifics.o
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c times.cpp -o times.o
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c tools.cpp -o tools.o
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang23/include -I/usr/local/clang/include -I/usr/local/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c trait.cpp -o trait.o
/usr/local/clang23/bin/clang++ -std=gnu++20 -shared -L/usr/local/clang/lib64 -L/usr/local/clang23/lib -L/usr/local/clang23/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o rtmpt.so Quelle.o adaptive_rejection_sampling.o additions.o derivatives.o diagnosis.o diffusion.o gibbs.o hamiltonian.o hcubature.o invtri.o joint.o lkj.o lnnorm.o main.o mvtimes.o onetimes.o r_wrapper.o rtimes.o rtmpt_init.o rwiener.o specifics.o times.o tools.o trait.o -L/usr/local/lib -lgsl -lgslcblas
make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-clang/rtmpt/src'
make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-clang/rtmpt/src'
make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-clang/rtmpt/src'
installing to /data/localhost/ripley/R/packages/tests-clang/rtmpt.Rcheck/00LOCK-rtmpt/00new/rtmpt/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rtmpt)