* installing *source* package ‘robustHD’ ...
** this is package ‘robustHD’ version ‘0.8.4’
** package ‘robustHD’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 23.1.0’
using C++ compiler: ‘clang version 23.1.0’
make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-clang/robustHD/src'
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c corHuber.cpp -o corHuber.o
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c fastGrplars.cpp -o fastGrplars.o
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c fastLars.cpp -o fastLars.o
In file included from corHuber.cpp:6:
In file included from ./corHuber.h:11:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo:436:
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from fastGrplars.cpp:6:
In file included from ./fastGrplars.h:11:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo:436:
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
6 warnings generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c fastLasso.cpp -o fastLasso.o
In file included from fastLars.cpp:6:
In file included from ./fastLars.h:11:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo:436:
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
4 warnings generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c fastRlars.cpp -o fastRlars.o
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c fastSparseLTS.cpp -o fastSparseLTS.o
3 warnings generated.
In file included from fastLasso.cpp:6:
In file included from ./fastLasso.h:11:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo:436:
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from fastSparseLTS.cpp:6:
In file included from ./fastSparseLTS.h:11:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo:436:
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:198:1: warning: unused function template 'arma_stop_runtime_error' [-Wunused-template]
198 | arma_stop_runtime_error(const T1& x)
| ^~~~~~~~~~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:335:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
335 | arma_plain_warn(const T1& arg1)
| ^~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
4 warnings generated.
8 warnings generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c initialSubsets.cpp -o initialSubsets.o
In file included from initialSubsets.cpp:6:
In file included from ./initialSubsets.h:11:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo:436:
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:198:1: warning: unused function template 'arma_stop_runtime_error' [-Wunused-template]
198 | arma_stop_runtime_error(const T1& x)
| ^~~~~~~~~~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:335:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
335 | arma_plain_warn(const T1& arg1)
| ^~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
8 warnings generated.
/usr/local/clang23/bin/clang-23 -std=gnu23 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c robustHD_init.c -o robustHD_init.o
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c utils.cpp -o utils.o
In file included from utils.cpp:6:
In file included from ./utils.h:11:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo:436:
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:198:1: warning: unused function template 'arma_stop_runtime_error' [-Wunused-template]
198 | arma_stop_runtime_error(const T1& x)
| ^~~~~~~~~~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:335:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
335 | arma_plain_warn(const T1& arg1)
| ^~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/data/localhost/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
8 warnings generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -shared -L/usr/local/clang/lib64 -L/usr/local/clang23/lib -L/usr/local/clang23/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o robustHD.so corHuber.o fastGrplars.o fastLars.o fastLasso.o fastRlars.o fastSparseLTS.o initialSubsets.o robustHD_init.o utils.o -L/data/localhost/ripley/R/R-clang/lib -lRlapack -L/data/localhost/ripley/R/R-clang/lib -lRblas -lflang_rt.runtime -lm -fopenmp
make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-clang/robustHD/src'
make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-clang/robustHD/src'
make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-clang/robustHD/src'
installing to /data/localhost/ripley/R/packages/tests-clang/robustHD.Rcheck/00LOCK-robustHD/00new/robustHD/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (robustHD)