- using R Under development (unstable) (2025-11-13 r89017)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 21.1.5
flang version 21.1.5
- running under: Fedora Linux 42 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘regmedint/DESCRIPTION’ ... OK
- this is package ‘regmedint’ version ‘1.0.1’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘regmedint’ can be installed ... [16s/57s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘Deriv’
All declared Imports should be used.
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [28s/54s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [75s/129s] ERROR
Running ‘testthat.R’ [74s/128s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(regmedint)
>
> test_check("regmedint")
Saving _problems/test-05_calc_myreg-133.R
Saving _problems/test-05_calc_myreg-174.R
Saving _problems/test-05_calc_myreg-215.R
Saving _problems/test-05_calc_myreg-256.R
[ FAIL 4 | WARN 0 | SKIP 2 | PASS 4128 ]
══ Skipped tests (2) ═══════════════════════════════════════════════════════════
• empty test (2): 'test-01_regmedint_class_ui.R:402:9',
'test-01_regmedint_class_ui.R:421:9'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-05_calc_myreg.R:112:9'): calc_myreg / calls calc_myreg_mreg_linear_yreg_linear when mreg linear / yreg linear ──
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
ℹ Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. └─testthat::with_mock(...) at test-05_calc_myreg.R:112:9
2. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
3. └─lifecycle:::deprecate_stop0(msg)
4. └─rlang::cnd_signal(...)
── Error ('test-05_calc_myreg.R:153:9'): calc_myreg / calls calc_myreg_mreg_linear_yreg_logistic when mreg linear / yreg logistic ──
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
ℹ Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. └─testthat::with_mock(...) at test-05_calc_myreg.R:153:9
2. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
3. └─lifecycle:::deprecate_stop0(msg)
4. └─rlang::cnd_signal(...)
── Error ('test-05_calc_myreg.R:194:9'): calc_myreg / calls calc_myreg_mreg_logistic_yreg_linear when mreg logistic / yreg linear ──
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
ℹ Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. └─testthat::with_mock(...) at test-05_calc_myreg.R:194:9
2. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
3. └─lifecycle:::deprecate_stop0(msg)
4. └─rlang::cnd_signal(...)
── Error ('test-05_calc_myreg.R:235:9'): calc_myreg / calls calc_myreg_mreg_logistic_yreg_logistic when mreg logistic / yreg logistic ──
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
ℹ Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. └─testthat::with_mock(...) at test-05_calc_myreg.R:235:9
2. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
3. └─lifecycle:::deprecate_stop0(msg)
4. └─rlang::cnd_signal(...)
[ FAIL 4 | WARN 0 | SKIP 2 | PASS 4128 ]
Error:
! Test failures.
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [141s/477s] OK
- checking PDF version of manual ... [11s/36s] OK
- checking HTML version of manual ... [4s/11s] OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 ERROR, 1 NOTE