- using R Under development (unstable) (2026-02-03 r89373)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 21.1.8
flang version 21.1.8
- running under: Fedora Linux 42 (Workstation Edition)
- using session charset: UTF-8
* current time: 2026-02-03 13:10:22Z
- using option ‘--no-stop-on-test-error’
- checking for file ‘quickpsy/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘quickpsy’ version ‘0.1.5.1’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘quickpsy’ can be installed ... [14s/19s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [23s/30s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ... ERROR
Running examples in ‘quickpsy-Ex.R’ failed
The error most likely occurred in:
> ### Name: deviance
> ### Title: Calculates the deviances
> ### Aliases: deviance
>
> ### ** Examples
>
> library(MPDiR) # contains the Vernier data
> fit <- quickpsy(Vernier, Phaseshift, NumUpward, N,
+ grouping = .(Direction, WaveForm, TempFreq), B = 20)
Error:
! `group_by_()` was deprecated in dplyr 0.7.0 and is now defunct.
ℹ Please use `group_by()` instead.
ℹ See vignette('programming') for more help
Backtrace:
▆
1. ├─quickpsy::quickpsy(...)
2. │ └─quickpsy::quickpsy_(...)
3. │ └─quickpsy::fitpsy(...)
4. │ └─d %>% group_by_(.dots = groups)
5. └─dplyr::group_by_(., .dots = groups)
6. └─dplyr:::lazy_defunct("group_by")
7. └─lifecycle::deprecate_stop(...)
8. └─lifecycle:::deprecate_stop0(msg)
9. └─rlang::cnd_signal(...)
Execution halted
- checking PDF version of manual ... [8s/10s] OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 ERROR