• using R Under development (unstable) (2025-09-16 r88840)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     clang version 21.1.1     flang version 21.1.1
• running under: Fedora Linux 42 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘planningML/DESCRIPTION’ ... OK
• this is package ‘planningML’ version ‘1.0.1’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘planningML’ can be installed ... [30s/96s] OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [9s/28s] OK
• checking whether the package can be loaded with stated dependencies ... [7s/18s] OK
• checking whether the package can be unloaded cleanly ... [7s/22s] OK
• checking whether the namespace can be loaded with stated dependencies ... [8s/24s] OK
• checking whether the namespace can be unloaded cleanly ... [8s/22s] OK
• checking loading without being on the library search path ... [8s/27s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [43s/131s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [9s/21s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [16s/40s] ERROR Error(s) in re-building vignettes: --- re-building ‘User_manual_for_planningML.Rmd’ using rmarkdown Quitting from User_manual_for_planningML.Rmd:161-165 [unnamed-chunk-15] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `auc()`: ! length(x) == length(unique(x)) is not TRUE --- Backtrace:     ▆  1. └─planningML::samplesize(...)  2. └─base::replicate(...)  3. └─base::sapply(...)  4. └─base::lapply(X = X, FUN = FUN, ...)  5. └─planningML (local) FUN(X[[i]], ...)  6. └─planningML (local) HCT.simulation(...)  7. └─MESS::auc(x = 1 - TNR.grid, y = TPR.grid, type = "spline")  8. └─base::stopifnot(length(x) == length(unique(x))) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'User_manual_for_planningML.Rmd' failed with diagnostics: length(x) == length(unique(x)) is not TRUE --- failed re-building ‘User_manual_for_planningML.Rmd’ SUMMARY: processing the following file failed:   ‘User_manual_for_planningML.Rmd’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [7s/17s] OK
• checking HTML version of manual ... OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 1 ERROR