Install log for 'pkgdepends'

* installing *source* package ‘pkgdepends’ ...
** this is package ‘pkgdepends’ version ‘0.9.0’
** package ‘pkgdepends’ successfully unpacked and MD5 sums checked
** using staged installation
*** Running ./configure
** libs
using C compiler: ‘clang version 20.1.7’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/pkgdepends/src'
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c tree-sitter/lib/src/lib.c -o tree-sitter/lib/src/lib.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c tree-sitter/r/parser.c -o tree-sitter/r/parser.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c tree-sitter/r/scanner.c -o tree-sitter/r/scanner.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c tree-sitter/markdown/parser.c -o tree-sitter/markdown/parser.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c tree-sitter/markdown/scanner.c -o tree-sitter/markdown/scanner.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c tree-sitter/markdown-inline/parser.c -o tree-sitter/markdown-inline/parser.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c tree-sitter/markdown-inline/scanner.c -o tree-sitter/markdown-inline/scanner.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c tree-sitter/yaml/parser.c -o tree-sitter/yaml/parser.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c tree-sitter/yaml/scanner.c -o tree-sitter/yaml/scanner.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c yaml/api.c -o yaml/api.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c yaml/dumper.c -o yaml/dumper.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c yaml/emitter.c -o yaml/emitter.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c yaml/loader.c -o yaml/loader.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c yaml/parser.c -o yaml/parser.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c yaml/reader.c -o yaml/reader.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c yaml/scanner.c -o yaml/scanner.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c yaml/writer.c -o yaml/writer.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c init.c -o init.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c cleancall.c -o cleancall.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c tree-sitter.c -o tree-sitter.o
clang-20 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml  -isystem /usr/local/clang20/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c yaml.c -o yaml.o
clang-20 -std=gnu23 -shared -L/usr/local/clang/lib64 -L/usr/local/clang20/lib -L/usr/local/clang20/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -L/usr/local/clang20/lib/clang/20/lib/x86_64-unknown-linux-gnu -o pkgdepends.so tree-sitter/lib/src/lib.o tree-sitter/r/parser.o tree-sitter/r/scanner.o tree-sitter/markdown/parser.o tree-sitter/markdown/scanner.o tree-sitter/markdown-inline/parser.o tree-sitter/markdown-inline/scanner.o tree-sitter/yaml/parser.o tree-sitter/yaml/scanner.o yaml/api.o yaml/dumper.o yaml/emitter.o yaml/loader.o yaml/parser.o yaml/reader.o yaml/scanner.o yaml/writer.o init.o cleancall.o tree-sitter.o yaml.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/pkgdepends/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/pkgdepends/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/pkgdepends/src'
installing to /data/gannet/ripley/R/packages/tests-clang/pkgdepends.Rcheck/00LOCK-pkgdepends/00new/pkgdepends/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (pkgdepends)