* installing *source* package ‘penalized’ ...
** this is package ‘penalized’ version ‘0.9-52’
** package ‘penalized’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 21.1.0-rc3’
using C++ compiler: ‘clang version 21.1.0-rc3’
using C++11
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/penalized/src'
/usr/local/clang21/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/clang21/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang21/Rcpp/include' -I'/data/gannet/ripley/R/test-clang21/RcppArmadillo/include' -isystem /usr/local/clang21/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw   -c RcppExports.cpp -o RcppExports.o
/usr/local/clang21/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/clang21/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang21/Rcpp/include' -I'/data/gannet/ripley/R/test-clang21/RcppArmadillo/include' -isystem /usr/local/clang21/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw   -c coxfit.cpp -o coxfit.o
/usr/local/clang21/bin/clang -std=gnu23 -I"/data/gannet/ripley/R/clang21/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang21/Rcpp/include' -I'/data/gannet/ripley/R/test-clang21/RcppArmadillo/include' -isystem /usr/local/clang21/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c init.c -o init.o
/usr/local/clang21/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/clang21/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang21/Rcpp/include' -I'/data/gannet/ripley/R/test-clang21/RcppArmadillo/include' -isystem /usr/local/clang21/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw   -c lasso.cpp -o lasso.o
/usr/local/clang21/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/clang21/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang21/Rcpp/include' -I'/data/gannet/ripley/R/test-clang21/RcppArmadillo/include' -isystem /usr/local/clang21/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw   -c ridge.cpp -o ridge.o
/usr/local/clang21/bin/clang++ -std=gnu++11 -shared -L/usr/local/clang/lib64 -L/usr/local/clang21/lib -L/usr/local/clang21/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -L/usr/local/clang21/lib/clang/21/lib/x86_64-unknown-linux-gnu -o penalized.so RcppExports.o coxfit.o init.o lasso.o ridge.o -L/data/gannet/ripley/R/clang21/lib -lRlapack -L/data/gannet/ripley/R/clang21/lib -lRblas -lflang_rt.runtime -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/penalized/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/penalized/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/penalized/src'
installing to /data/gannet/ripley/R/packages/tests-clang/penalized.Rcheck/00LOCK-penalized/00new/penalized/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (penalized)