- using R Under development (unstable) (2026-09-22 r90584)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 23.1.1
flang version 23.1.1
- running under: Fedora Linux 44 (Server Edition)
- using session charset: UTF-8
* current time: 2026-09-23 21:59:32 UTC
- using option ‘--no-stop-on-test-error’
- checking for file ‘parsnip/DESCRIPTION’ ... OK
- this is package ‘parsnip’ version ‘1.6.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘parsnip’ can be installed ... [15s/17s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [22s/25s] NOTE
Found calls to structure() using deprecated special names:
parsnip/tests/testthat/test-svm_linear.R (.Label: 2)
parsnip/tests/testthat/test-svm_rbf.R (.Label: 1)
'.Label' should be changed to 'levels'.
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... INFO
Undeclared packages ‘partykit’, ‘Cubist’, ‘rules’, ‘h2o’, ‘agua’, ‘baguette’, ‘ipred’, ‘dbarts’, ‘bonsai’, ‘lightgbm’, ‘mboost’, ‘rpartScore’, ‘mda’, ‘sda’, ‘sparsediscrim’, ‘klaR’, ‘workflows’, ‘VGAM’, ‘brulee’, ‘glmnet’, ‘quantreg’, ‘rstan’, ‘rstanarm’, ‘qrnn’, ‘naivebayes’, ‘ordinalNet’, ‘plsmod’, ‘pscl’, ‘aorsf’, ‘ordinalForest’, ‘randomForest’, ‘xrf’, ‘flexsurv’, ‘broom’ in Rd xrefs
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [58s/64s] ERROR
Running ‘testthat.R’ [58s/64s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(parsnip)
>
> test_check("parsnip")
Attaching package: 'modeldata'
The following object is masked from 'package:datasets':
penguins
warning: Failed to inspect Python interpreter from search path at `/usr/sbin/pypy`
cause: Can't use Python at `/usr/sbin/pypy`
cause: Python executable does not support `-I` flag. Please use Python 3.6 or newer.
To use legacy Keras via py_require(), call py_require_legacy_keras() at the start of the R session.
Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
Attaching package: 'sparklyr'
The following object is masked from 'package:stats':
filter
Saving _problems/test-svm_linear-108.R
Saving _problems/test-svm_linear-127.R
[ FAIL 2 | WARN 3 | SKIP 275 | PASS 810 ]
══ Skipped tests (275) ═════════════════════════════════════════════════════════
• On CRAN (253): 'test-adds.R:7:1', 'test-args_and_modes.R:1:1',
'test-args_and_modes.R:31:1', 'test-args_and_modes.R:41:1',
'test-args_and_modes.R:49:1', 'test-args_and_modes.R:119:1',
'test-arguments.R:1:1', 'test-augment.R:1:1', 'test-augment.R:140:1',
'test-bart-tunable.R:1:1', 'test-boost_tree-tunable.R:1:1',
'test-boost_tree-tunable.R:9:1', 'test-boost_tree-tunable.R:17:1',
'test-boost_tree-tunable.R:25:1', 'test-boost_tree-tunable.R:33:1',
'test-boost_tree.R:7:1', 'test-boost_tree.R:15:1', 'test-boost_tree.R:43:3',
'test-boost_tree.R:55:3', 'test-boost_tree_C5.0.R:14:1',
'test-boost_tree_C5.0.R:116:1', 'test-boost_tree_C5.0.R:162:1',
'test-boost_tree_xgboost.R:33:3', 'test-boost_tree_xgboost.R:112:3',
'test-boost_tree_xgboost.R:182:3', 'test-boost_tree_xgboost.R:208:3',
'test-boost_tree_xgboost.R:244:3', 'test-boost_tree_xgboost.R:279:3',
'test-boost_tree_xgboost.R:342:3', 'test-boost_tree_xgboost.R:368:3',
'test-boost_tree_xgboost.R:422:3', 'test-boost_tree_xgboost.R:485:3',
'test-boost_tree_xgboost.R:574:3', 'test-boost_tree_xgboost.R:646:3',
'test-boost_tree_xgboost.R:688:3', 'test-boost_tree_xgboost.R:790:3',
'test-boost_tree_xgboost.R:848:3', 'test-boost_tree_xgboost.R:946:3',
'test-case-weights.R:105:1', 'test-condense_control.R:1:1',
'test-convert_data.R:280:1', 'test-convert_data.R:348:1',
'test-convert_data.R:379:1', 'test-convert_data.R:660:1',
'test-convert_data.R:677:1', 'test-decision_tree-tunable.R:1:1',
'test-decision_tree-tunable.R:9:1', 'test-decision_tree-tunable.R:17:1',
'test-decision_tree-tunable.R:25:1', 'test-decision_tree.R:7:1',
'test-decision_tree.R:15:1', 'test-decision_tree.R:32:1',
'test-descriptors.R:202:1', 'test-descriptors.R:225:3', 'test-engines.R:1:1',
'test-extract.R:3:1', 'test-extract.R:54:1', 'test-extract.R:67:1',
'test-extract.R:110:1', 'test-failed_models.R:25:1',
'test-failed_models.R:47:1', 'test-fit_interfaces.R:39:1',
'test-fit_interfaces.R:70:1', 'test-fit_interfaces.R:86:1',
'test-fit_interfaces.R:122:1', 'test-fit_interfaces.R:172:3',
'test-format_predictions.R:128:1', 'test-format_predictions.R:132:1',
'test-format_predictions.R:136:1', 'test-format_predictions.R:140:1',
'test-format_predictions.R:144:1', 'test-format_predictions.R:148:1',
'test-format_predictions.R:152:1', 'test-gen_additive_mod-tunable.R:1:1',
'test-gen_additive_model.R:3:1', 'test-gen_additive_model.R:47:1',
'test-linear_reg-tunable.R:1:1', 'test-linear_reg-tunable.R:9:1',
'test-linear_reg-tunable.R:17:1', 'test-linear_reg-tunable.R:25:1',
'test-linear_reg-tunable.R:33:1', 'test-linear_reg-tunable.R:41:1',
'test-linear_reg-tunable.R:49:1', 'test-linear_reg-tunable.R:57:1',
'test-linear_reg-tunable.R:65:1', 'test-linear_reg-tunable.R:73:1',
'test-linear_reg-tunable.R:81:1', 'test-linear_reg-tunable.R:89:1',
'test-linear_reg-tunable.R:97:1', 'test-linear_reg-tunable.R:105:1',
'test-linear_reg.R:7:1', 'test-linear_reg.R:15:1', 'test-linear_reg.R:29:1',
'test-linear_reg.R:109:1', 'test-linear_reg.R:308:1',
'test-linear_reg.R:318:1', 'test-linear_reg.R:325:1',
'test-linear_reg.R:354:1', 'test-linear_reg.R:408:1',
'test-linear_reg_keras3.R:30:3', 'test-linear_reg_keras3.R:94:3',
'test-logistic_reg-tunable.R:1:1', 'test-logistic_reg-tunable.R:9:1',
'test-logistic_reg-tunable.R:17:1', 'test-logistic_reg-tunable.R:25:1',
'test-logistic_reg-tunable.R:33:1', 'test-logistic_reg-tunable.R:41:1',
'test-logistic_reg-tunable.R:49:1', 'test-logistic_reg.R:7:1',
'test-logistic_reg.R:15:1', 'test-logistic_reg.R:39:1',
'test-logistic_reg.R:174:1', 'test-logistic_reg.R:271:1',
'test-logistic_reg.R:312:1', 'test-logistic_reg_keras3.R:40:3',
'test-logistic_reg_keras3.R:104:3', 'test-logistic_reg_keras3.R:154:3',
'test-mars-tunable.R:1:1', 'test-mars.R:7:1', 'test-mars.R:24:1',
'test-mars.R:155:1', 'test-mars.R:251:1', 'test-misc.R:6:1',
'test-misc.R:60:1', 'test-misc.R:104:1', 'test-misc.R:132:1',
'test-misc.R:167:1', 'test-misc.R:171:1', 'test-misc.R:179:1',
'test-misc.R:251:1', 'test-misc.R:304:1', 'test-mlp-tunable.R:1:1',
'test-mlp-tunable.R:9:1', 'test-mlp-tunable.R:17:1',
'test-mlp-tunable.R:25:1', 'test-mlp.R:5:1', 'test-mlp.R:13:1',
'test-mlp.R:62:1', 'test-mlp.R:96:1', 'test-mlp_keras3.R:26:3',
'test-mlp_keras3.R:68:3', 'test-mlp_keras3.R:127:3',
'test-mlp_keras3.R:184:3', 'test-mlp_keras3.R:210:3',
'test-mlp_keras3.R:255:3', 'test-mlp_keras3.R:296:3',
'test-model_basics.R:1:1', 'test-multinom_reg-tunable.R:1:1',
'test-multinom_reg-tunable.R:9:1', 'test-multinom_reg-tunable.R:17:1',
'test-multinom_reg-tunable.R:25:1', 'test-multinom_reg-tunable.R:33:1',
'test-multinom_reg.R:6:1', 'test-multinom_reg.R:14:1',
'test-multinom_reg.R:30:1', 'test-multinom_reg.R:55:1',
'test-multinom_reg_keras3.R:38:3', 'test-multinom_reg_keras3.R:102:3',
'test-multinom_reg_keras3.R:152:3', 'test-nearest_neighbor-tunable.R:1:1',
'test-nearest_neighbor.R:1:1', 'test-nearest_neighbor.R:9:1',
'test-nearest_neighbor.R:13:1', 'test-nearest_neighbor_kknn.R:17:1',
'test-nearest_neighbor_kknn.R:199:1', 'test-null_model-tunable.R:1:1',
'test-nullmodel.R:5:1', 'test-nullmodel.R:27:1', 'test-nullmodel.R:134:1',
'test-packages.R:5:1', 'test-packages.R:33:1', 'test-partykit.R:4:3',
'test-partykit.R:49:3', 'test-predict_formats.R:148:1',
'test-predict_formats.R:202:3', 'test-print.R:1:1', 'test-print.R:9:1',
'test-rand_forest-tunable.R:1:1', 'test-rand_forest-tunable.R:9:1',
'test-rand_forest-tunable.R:17:1', 'test-rand_forest-tunable.R:25:1',
'test-rand_forest-tunable.R:33:1', 'test-rand_forest.R:1:1',
'test-rand_forest.R:9:1', 'test-rand_forest_ranger.R:21:1',
'test-rand_forest_ranger.R:121:1', 'test-rand_forest_ranger.R:264:1',
'test-rand_forest_ranger.R:476:1', 'test-rand_forest_ranger.R:548:1',
'test-re_registration.R:30:1', 'test-re_registration.R:68:1',
'test-re_registration.R:105:1', 'test-registration.R:1:1',
'test-registration.R:65:1', 'test-registration.R:70:1',
'test-registration.R:81:1', 'test-registration.R:105:1',
'test-registration.R:143:1', 'test-registration.R:285:1',
'test-registration.R:416:1', 'test-registration.R:552:1',
'test-repair_call.R:1:1', 'test-sparsevctrs.R:5:3',
'test-sparsevctrs.R:23:1', 'test-sparsevctrs.R:37:3',
'test-sparsevctrs.R:55:1', 'test-sparsevctrs.R:69:3',
'test-sparsevctrs.R:86:1', 'test-sparsevctrs.R:100:3',
'test-sparsevctrs.R:117:1', 'test-sparsevctrs.R:149:1',
'test-sparsevctrs.R:186:1', 'test-sparsevctrs.R:205:3',
'test-sparsevctrs.R:247:3', 'test-sparsevctrs.R:292:3',
'test-sparsevctrs.R:368:1', 'test-standalone-survival.R:1:1',
'test-surv_reg-tunable.R:1:1', 'test-surv_reg-tunable.R:9:1',
'test-surv_reg-tunable.R:17:1', 'test-svm_linear-tunable.R:1:1',
'test-svm_linear-tunable.R:9:1', 'test-svm_linear.R:7:1',
'test-svm_linear.R:15:1', 'test-svm_linear.R:160:1',
'test-svm_poly-tunable.R:1:1', 'test-svm_poly.R:6:1', 'test-svm_poly.R:14:1',
'test-svm_rbf-tunable.R:1:1', 'test-svm_rbf-tunable.R:9:1',
'test-svm_rbf.R:7:1', 'test-svm_rbf.R:15:1', 'test-svm_rbf.R:23:1',
'test-translate.R:24:1', 'test-translate.R:48:1', 'test-translate.R:75:1',
'test-translate.R:85:1', 'test-translate.R:118:1', 'test-translate.R:160:1',
'test-translate.R:174:1', 'test-translate.R:207:1', 'test-translate.R:224:1',
'test-translate.R:246:1', 'test-translate.R:277:1', 'test-translate.R:290:1',
'test-translate.R:320:1', 'test-translate.R:330:1', 'test-translate.R:340:1',
'test-translate.R:352:1', 'test-translate.R:363:1', 'test-tune_args.R:27:1',
'test-update.R:1:1', 'test-update.R:27:1'
• empty test (1):
• nrow(spark_installed_versions()) == 0 is TRUE (1): 'test-boost_tree.R:26:3'
• waiting for keras3 (4): 'test-linear_reg_keras.R:1:1',
'test-logistic_reg_keras.R:1:1', 'test-mlp_keras.R:1:1',
'test-multinom_reg_keras.R:1:1'
• {brulee} is not installed (2): 'test-mlp.R:34:3', 'test-tunable.R:2:3'
• {glmnet} is not installed (3): 'test-linear_reg.R:377:3',
'test-predict_formats.R:191:3', 'test-sparsevctrs.R:341:3'
• {nnet} is not installed (9): 'test-mlp_nnet.R:14:3', 'test-mlp_nnet.R:47:3',
'test-mlp_nnet.R:105:3', 'test-mlp_nnet.R:128:3', 'test-mlp_nnet.R:161:3',
'test-multinom_reg_nnet.R:24:3', 'test-multinom_reg_nnet.R:62:3',
'test-multinom_reg_nnet.R:82:3', 'test-multinom_reg_nnet.R:108:3'
• {quantreg} is not installed (2): 'test-linear_reg_quantreg.R:4:3',
'test-linear_reg_quantreg.R:58:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-svm_linear.R:104:3'): linear svm regression prediction: LiblineaR ──
Expected `as.data.frame(liblinear_pred)` to equal `as.data.frame(parsnip_pred)`.
Differences:
actual vs expected
.pred
- actual[1, ] 85.13979
+ expected[1, ] 116.95434
- actual[2, ] 576.16232
+ expected[2, ] 592.97292
- actual[3, ] 1886.10132
+ expected[3, ] 1862.88470
`actual$.pred`: 85.1 576.2 1886.1
`expected$.pred`: 117.0 593.0 1862.9
── Failure ('test-svm_linear.R:123:3'): linear svm regression prediction: LiblineaR ──
Expected `as.data.frame(liblinear_pred)` to equal `as.data.frame(parsnip_xy_pred)`.
Differences:
actual vs expected
.pred
- actual[1, ] 85.13979
+ expected[1, ] 116.95434
- actual[2, ] 576.16232
+ expected[2, ] 592.97292
- actual[3, ] 1886.10132
+ expected[3, ] 1862.88470
`actual$.pred`: 85.1 576.2 1886.1
`expected$.pred`: 117.0 593.0 1862.9
[ FAIL 2 | WARN 3 | SKIP 275 | PASS 810 ]
Error:
! Test failures.
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... OK
- checking PDF version of manual ... [13s/15s] OK
- checking HTML version of manual ... [9s/10s] OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 ERROR, 1 NOTE