- using R Under development (unstable) (2026-03-06 r89561)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 22.1.0 (https://github.com/llvm/llvm-project 4434dabb69916856b824f68a64b029c67175e532)
flang version 22.1.0 (https://github.com/llvm/llvm-project 4434dabb69916856b824f68a64b029c67175e532)
- running under: Fedora Linux 42 (Workstation Edition)
- using session charset: UTF-8
* current time: 2026-03-07 09:24:24 UTC
- using option ‘--no-stop-on-test-error’
- checking for file ‘netdiffuseR/DESCRIPTION’ ... OK
- this is package ‘netdiffuseR’ version ‘1.24.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘netdiffuseR’ can be installed ... [162s/242s] OK
See the install log for details.
- used C++ compiler: ‘clang version 22.1.0 (https://github.com/llvm/llvm-project 4434dabb69916856b824f68a64b029c67175e532)’
- checking installed package size ... INFO
installed size is 5.6Mb
sub-directories of 1Mb or more:
doc 2.4Mb
help 1.3Mb
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking whether startup messages can be suppressed ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [52s/92s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in shell scripts ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [49s/109s] ERROR
Running examples in ‘netdiffuseR-Ex.R’ failed
The error most likely occurred in:
> ### Name: round_to_seq
> ### Title: Takes a numeric vector and maps it into a finite length sequence
> ### Aliases: round_to_seq
>
> ### ** Examples
>
>
> x <- rnorm(100)
> w <- data.frame(as.integer(round_to_seq(x, as_factor = TRUE)),x)
> plot(w,x)
Error in attr(x, "formula") %||% { : invalid formula
Calls: plot ... plot.data.frame -> <Anonymous> -> formula -> formula.default -> %||%
Execution halted
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [46s/100s] OK
Running ‘testthat.R’ [46s/99s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [177s/306s] OK
- checking PDF version of manual ... [17s/38s] OK
- checking HTML version of manual ... [24s/48s] OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 ERROR