* installing *source* package ‘mmand’ ...
** package ‘mmand’ successfully unpacked and MD5 sums checked
** using staged installation
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether /usr/local/clang18/bin/clang++ -std=gnu++17 accepts -g... yes
checking for OpenMP flag of C++ compiler... -fopenmp
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C++ compiler: ‘clang version 18.1.2’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/mmand/src'
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DLEMON_DISABLE_ASSERTS -I. -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c Array.cpp -o Array.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DLEMON_DISABLE_ASSERTS -I. -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c Componenter.cpp -o Componenter.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DLEMON_DISABLE_ASSERTS -I. -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c Distancer.cpp -o Distancer.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DLEMON_DISABLE_ASSERTS -I. -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c Kernel.cpp -o Kernel.o
In file included from Componenter.cpp:6:
./lemon/connectivity.h:268:36: warning: unused typedef 'Node' [-Wunused-local-typedef]
268 | typedef typename Digraph::Node Node;
| ^
./lemon/connectivity.h:338:37: warning: unused typedef 'ArcIt' [-Wunused-local-typedef]
338 | typedef typename Digraph::ArcIt ArcIt;
| ^
./lemon/connectivity.h:336:35: warning: unused typedef 'Arc' [-Wunused-local-typedef]
336 | typedef typename Digraph::Arc Arc;
| ^
./lemon/connectivity.h:1346:36: warning: unused typedef 'Node' [-Wunused-local-typedef]
1346 | typedef typename Digraph::Node Node;
| ^
./lemon/connectivity.h:1348:35: warning: unused typedef 'Arc' [-Wunused-local-typedef]
1348 | typedef typename Digraph::Arc Arc;
| ^
./lemon/connectivity.h:1561:35: warning: unused typedef 'ArcIt' [-Wunused-local-typedef]
1561 | typedef typename Graph::ArcIt ArcIt;
| ^
./lemon/connectivity.h:1606:34: warning: unused typedef 'Node' [-Wunused-local-typedef]
1606 | typedef typename Graph::Node Node;
| ^
./lemon/connectivity.h:1608:35: warning: unused typedef 'ArcIt' [-Wunused-local-typedef]
1608 | typedef typename Graph::ArcIt ArcIt;
| ^
8 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DLEMON_DISABLE_ASSERTS -I. -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c Morpher.cpp -o Morpher.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DLEMON_DISABLE_ASSERTS -I. -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c Resampler.cpp -o Resampler.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DLEMON_DISABLE_ASSERTS -I. -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c main.cpp -o main.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o mmand.so Array.o Componenter.o Distancer.o Kernel.o Morpher.o Resampler.o main.o -fopenmp
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/mmand/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/mmand/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/mmand/src'
installing to /data/gannet/ripley/R/packages/tests-clang/mmand.Rcheck/00LOCK-mmand/00new/mmand/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (mmand)