* installing *source* package ‘mlstm’ ...
** this is package ‘mlstm’ version ‘0.1.7’
** package ‘mlstm’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
specified C++17
using C++ compiler: ‘clang version 23.1.1’
using C++17
make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-clang/mlstm/src'
/usr/local/clang23/bin/clang++ -std=gnu++17 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG  -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppArmadillo/include' -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -I'/data/localhost/ripley/R/test-clang/BH/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23   -c LDA.cpp -o LDA.o
/usr/local/clang23/bin/clang++ -std=gnu++17 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG  -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppArmadillo/include' -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -I'/data/localhost/ripley/R/test-clang/BH/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23   -c MLSTM.cpp -o MLSTM.o
/usr/local/clang23/bin/clang++ -std=gnu++17 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG  -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppArmadillo/include' -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -I'/data/localhost/ripley/R/test-clang/BH/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23   -c RcppExports.cpp -o RcppExports.o
/usr/local/clang23/bin/clang++ -std=gnu++17 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG  -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppArmadillo/include' -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -I'/data/localhost/ripley/R/test-clang/BH/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23   -c STM.cpp -o STM.o
In file included from MLSTM.cpp:4:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/math/special_functions/digamma.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/math/constants/constants.hpp:18:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/math/tools/convert_from_string.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__exclude_from_explicit_instantiation__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
   29 | BOOST_MOVE_STD_NS_BEG
      | ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
   21 |    #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
      |                                  ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
   74 | #  define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
      |                                       ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
   70 |     _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
      |                                        ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
   51 |   _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push(                                         \
      |   ^
<scratch space>:107:69: note: expanded from here
  107 |  clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
      |                                                                     ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
   61 | BOOST_MOVE_STD_NS_END
      | ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
   22 |    #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
      |                                  ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
   75 | #  define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
      |                                       ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
   72 | #  define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
      |                                                   ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
   57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
      |                                                ^
<scratch space>:109:8: note: expanded from here
  109 |  clang attribute _LibcxxExplicitABIAnnotations.pop
      |        ^
In file included from MLSTM.cpp:4:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/math/special_functions/digamma.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/math/constants/constants.hpp:18:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/math/tools/convert_from_string.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__visibility__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
   29 | BOOST_MOVE_STD_NS_BEG
      | ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
   21 |    #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
      |                                  ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
   74 | #  define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
      |                                       ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
   70 |     _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
      |                                        ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
   51 |   _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push(                                         \
      |   ^
<scratch space>:107:110: note: expanded from here
  107 |  clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
      |                                                                                                              ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
   61 | BOOST_MOVE_STD_NS_END
      | ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
   22 |    #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
      |                                  ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
   75 | #  define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
      |                                       ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
   72 | #  define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
      |                                                   ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
   57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
      |                                                ^
<scratch space>:109:8: note: expanded from here
  109 |  clang attribute _LibcxxExplicitABIAnnotations.pop
      |        ^
In file included from MLSTM.cpp:4:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/math/special_functions/digamma.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/math/constants/constants.hpp:18:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/math/tools/convert_from_string.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__abi_tag__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
   29 | BOOST_MOVE_STD_NS_BEG
      | ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
   21 |    #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
      |                                  ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
   74 | #  define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
      |                                       ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
   70 |     _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
      |                                        ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
   51 |   _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push(                                         \
      |   ^
<scratch space>:107:136: note: expanded from here
  107 |  clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
      |                                                                                                                                        ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
   61 | BOOST_MOVE_STD_NS_END
      | ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
   22 |    #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
      |                                  ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
   75 | #  define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
      |                                       ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
   72 | #  define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
      |                                                   ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
   57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
      |                                                ^
<scratch space>:109:8: note: expanded from here
  109 |  clang attribute _LibcxxExplicitABIAnnotations.pop
      |        ^
In file included from STM.cpp:4:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/math/special_functions/digamma.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/math/constants/constants.hpp:18:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/math/tools/convert_from_string.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__exclude_from_explicit_instantiation__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
   29 | BOOST_MOVE_STD_NS_BEG
      | ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
   21 |    #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
      |                                  ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
   74 | #  define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
      |                                       ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
   70 |     _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
      |                                        ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
   51 |   _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push(                                         \
      |   ^
<scratch space>:107:69: note: expanded from here
  107 |  clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
      |                                                                     ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
   61 | BOOST_MOVE_STD_NS_END
      | ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
   22 |    #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
      |                                  ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
   75 | #  define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
      |                                       ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
   72 | #  define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
      |                                                   ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
   57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
      |                                                ^
<scratch space>:109:8: note: expanded from here
  109 |  clang attribute _LibcxxExplicitABIAnnotations.pop
      |        ^
In file included from STM.cpp:4:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/math/special_functions/digamma.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/math/constants/constants.hpp:18:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/math/tools/convert_from_string.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__visibility__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
   29 | BOOST_MOVE_STD_NS_BEG
      | ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
   21 |    #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
      |                                  ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
   74 | #  define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
      |                                       ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
   70 |     _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
      |                                        ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
   51 |   _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push(                                         \
      |   ^
<scratch space>:107:110: note: expanded from here
  107 |  clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
      |                                                                                                              ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
   61 | BOOST_MOVE_STD_NS_END
      | ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
   22 |    #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
      |                                  ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
   75 | #  define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
      |                                       ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
   72 | #  define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
      |                                                   ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
   57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
      |                                                ^
<scratch space>:109:8: note: expanded from here
  109 |  clang attribute _LibcxxExplicitABIAnnotations.pop
      |        ^
In file included from STM.cpp:4:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/math/special_functions/digamma.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/math/constants/constants.hpp:18:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/math/tools/convert_from_string.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__abi_tag__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
   29 | BOOST_MOVE_STD_NS_BEG
      | ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
   21 |    #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
      |                                  ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
   74 | #  define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
      |                                       ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
   70 |     _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
      |                                        ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
   51 |   _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push(                                         \
      |   ^
<scratch space>:107:136: note: expanded from here
  107 |  clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
      |                                                                                                                                        ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
   61 | BOOST_MOVE_STD_NS_END
      | ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
   22 |    #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
      |                                  ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
   75 | #  define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
      |                                       ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
   72 | #  define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
      |                                                   ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
   57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
      |                                                ^
<scratch space>:109:8: note: expanded from here
  109 |  clang attribute _LibcxxExplicitABIAnnotations.pop
      |        ^
3 warnings generated.
3 warnings generated.
/usr/local/clang23/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang23/lib -L/usr/local/clang23/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o mlstm.so LDA.o MLSTM.o RcppExports.o STM.o -L/data/localhost/ripley/R/R-clang/lib -lRlapack -L/data/localhost/ripley/R/R-clang/lib -lRblas -lflang_rt.runtime -lm -fopenmp
make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-clang/mlstm/src'
make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-clang/mlstm/src'
make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-clang/mlstm/src'
installing to /data/localhost/ripley/R/packages/tests-clang/mlstm.Rcheck/00LOCK-mlstm/00new/mlstm/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (mlstm)