• using R Under development (unstable) (2025-11-14 r89021)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     clang version 21.1.5     flang version 21.1.5
• running under: Fedora Linux 42 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘metan/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘metan’ version ‘1.19.0’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘metan’ can be installed ... [75s/96s] OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... [6s/10s] OK
• checking loading without being on the library search path ... OK
• checking whether startup messages can be suppressed ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [130s/160s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [14s/18s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [115s/157s] OK
• checking PDF version of manual ... [26s/35s] OK
• checking HTML version of manual ... [42s/67s] NOTE Found the following HTML validation problems: metan.html:1272:1 (acv.Rd:6): Warning: <script> anchor "MathJax-script" already defined metan.html:1441:1 (ammi_indexes.Rd:44): Warning: <script> anchor "MathJax-script" already defined metan.html:2588:1 (blup_indexes.Rd:43): Warning: <script> anchor "MathJax-script" already defined metan.html:2848:1 (clustering.Rd:77): Warning: <script> anchor "MathJax-script" already defined metan.html:3067:1 (coincidence_index.Rd:33): Warning: <script> anchor "MathJax-script" already defined metan.html:3367:1 (corr_ci.Rd:53): Warning: <script> anchor "MathJax-script" already defined metan.html:3549:1 (corr_coef.Rd:57): Warning: <script> anchor "MathJax-script" already defined metan.html:3992:1 (corr_ss.Rd:23): Warning: <script> anchor "MathJax-script" already defined metan.html:6364:1 (gafem.Rd:80): Warning: <script> anchor "MathJax-script" already defined metan.html:6476:1 (gai.Rd:39): Warning: <script> anchor "MathJax-script" already defined metan.html:6653:1 (gamem.Rd:98): Warning: <script> anchor "MathJax-script" already defined metan.html:7894:1 (ge_polar.Rd:6): Warning: <script> anchor "MathJax-script" already defined metan.html:11003:1 (mantel_test.Rd:6): Warning: <script> anchor "MathJax-script" already defined metan.html:11162:1 (mgidi.Rd:106): Warning: <script> anchor "MathJax-script" already defined metan.html:12952:1 (performs_ammi.Rd:58): Warning: <script> anchor "MathJax-script" already defined metan.html:23082:1 (utils_stats.Rd:244): Warning: <script> anchor "MathJax-script" already defined metan.html:23411:1 (waas.Rd:114): Warning: <script> anchor "MathJax-script" already defined metan.html:23674:1 (waas_means.Rd:81): Warning: <script> anchor "MathJax-script" already defined metan.html:23861:1 (waasb.Rd:147): Warning: <script> anchor "MathJax-script" already defined
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 1 NOTE