- using R Under development (unstable) (2025-10-15 r88920)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 21.1.2
flang version 21.1.2
- running under: Fedora Linux 42 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘medicalcoder/DESCRIPTION’ ... OK
- this is package ‘medicalcoder’ version ‘0.6.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘medicalcoder’ can be installed ... [41s/96s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [6s/18s] OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... [5s/11s] OK
- checking whether the namespace can be loaded with stated dependencies ... [5s/16s] OK
- checking whether the namespace can be unloaded cleanly ... [5s/14s] OK
- checking loading without being on the library search path ... [6s/13s] OK
- checking whether startup messages can be suppressed ... [6s/13s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [36s/106s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking R/sysdata.rda ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [40s/132s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [7m/20m] OK
Running ‘test-asserts.R’ [6s/19s]
Running ‘test-charlson-codes.R’ [7s/19s]
Running ‘test-charlson-index-scores.R’ [6s/18s]
Running ‘test-charlson.R’ [37s/84s]
Running ‘test-comorbidities.R’ [7s/29s]
Running ‘test-elixhauser-codes.R’ [6s/14s]
Running ‘test-elixhauser-example.R’ [7s/30s]
Running ‘test-elixhauser-index-scores.R’ [7s/17s]
Running ‘test-elixhauser-poa.R’ [7s/18s]
Running ‘test-elixhauser.R’ [6s/13s]
Running ‘test-get_icd.R’ [46s/88s]
Running ‘test-icd-codes.R’ [6s/16s]
Running ‘test-icd_compact_to_full.R’ [6s/12s]
Running ‘test-is_icd.R’ [43s/118s]
Running ‘test-locked-bindings.R’ [12s/50s]
Running ‘test-longitudinal-comorbidities.R’ [8s/14s]
Running ‘test-longitudinal-pccc-v3.1.R’ [6s/13s]
Running ‘test-lookup_icd_codes.R’ [21s/35s]
Running ‘test-pccc-codes.R’ [11s/32s]
Running ‘test-pccc-conditions.R’ [6s/11s]
Running ‘test-pccc-deltas.R’ [26s/82s]
Running ‘test-pccc.R’ [30s/100s]
Running ‘test-summary.R’ [14s/33s]
Running ‘test-tibble-datatable.R’ [98s/302s]
Running ‘test-vs-pccc_1.0.6.R’ [13s/40s]
Running ‘test-zero-row-inputs.R’ [6s/13s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [161s/392s] OK
- checking PDF version of manual ... [8s/23s] OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: OK