* installing *source* package ‘measr’ ...
** this is package ‘measr’ version ‘2.0.1’
** package ‘measr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
specified C++17
using C++ compiler: ‘clang version 23.1.1’
using C++17
make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-clang/measr/src'
/usr/local/clang23/bin/clang++ -std=gnu++17 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I"../inst/include" -I"/data/localhost/ripley/R/test-clang/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/data/localhost/ripley/R/test-clang/BH/include' -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppEigen/include' -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -I'/data/localhost/ripley/R/test-clang/rstan/include' -I'/data/localhost/ripley/R/test-clang/StanHeaders/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/data/localhost/ripley/R/test-clang/RcppParallel/include -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c RcppExports.cpp -o RcppExports.o
In file included from RcppExports.cpp:4:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from RcppExports.cpp:4:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from RcppExports.cpp:4:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from RcppExports.cpp:4:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
5 warnings generated.
/usr/local/clang23/bin/clang++ -std=gnu++17 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I"../inst/include" -I"/data/localhost/ripley/R/test-clang/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/data/localhost/ripley/R/test-clang/BH/include' -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppEigen/include' -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -I'/data/localhost/ripley/R/test-clang/rstan/include' -I'/data/localhost/ripley/R/test-clang/StanHeaders/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/data/localhost/ripley/R/test-clang/RcppParallel/include -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c stanExports_gqs_loglik.cc -o stanExports_gqs_loglik.o
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:21:
/data/localhost/ripley/R/test-clang/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
47 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/usr/local/clang23/bin/../include/c++/v1/streambuf:381:22: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
381 | virtual streamsize xsputn(const char_type* __s, streamsize __n) {
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:21:
/data/localhost/ripley/R/test-clang/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
70 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/usr/local/clang23/bin/../include/c++/v1/streambuf:381:22: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
381 | virtual streamsize xsputn(const char_type* __s, streamsize __n) {
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:11:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/constraint.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/abs.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__exclude_from_explicit_instantiation__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
29 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:21:69: note: expanded from here
21 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
61 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:23:8: note: expanded from here
23 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:11:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/constraint.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/abs.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__visibility__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
29 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:21:110: note: expanded from here
21 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
61 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:23:8: note: expanded from here
23 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:11:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/constraint.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/abs.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__abi_tag__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
29 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:21:136: note: expanded from here
21 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
61 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:23:8: note: expanded from here
23 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:34:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:131:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:39:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/linear_algebra.hpp:20:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:40:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/unscale.hpp:28:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:21:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:18:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/prob.hpp:290:
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/prob/student_t_qf.hpp:74:32: warning: unused variable 'function' [-Wunused-variable]
74 | static constexpr const char* function = "student_t_qf";
| ^~~~~~~~
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:49:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:16:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/prob.hpp:7:
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:52:20: warning: unused variable 'p_val_flip' [-Wunused-variable]
52 | const double p_val_flip = p_val < 0.5 ? p_val : 1.0 - p_val;
| ^~~~~~~~~~
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:42:18: warning: unused variable 'sqrt_inv_ibeta_m1' [-Wunused-variable]
42 | const double sqrt_inv_ibeta_m1 = sqrt(inv(ibeta_arg) - 1.0);
| ^~~~~~~~~~~~~~~~~
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:50:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/experimental/advi/fullrank.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/variational/advi.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer.hpp:57:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer/details.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/move.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/iterator.hpp:27:
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:63:1: warning: unused attribute '__exclude_from_explicit_instantiation__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
63 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:9:69: note: expanded from here
9 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:81:1: note: '#pragma clang attribute push' regions ends here
81 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:11:8: note: expanded from here
11 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:50:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/experimental/advi/fullrank.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/variational/advi.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer.hpp:57:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer/details.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/move.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/iterator.hpp:27:
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:63:1: warning: unused attribute '__visibility__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
63 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:9:110: note: expanded from here
9 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:81:1: note: '#pragma clang attribute push' regions ends here
81 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:11:8: note: expanded from here
11 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:50:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/experimental/advi/fullrank.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/variational/advi.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer.hpp:57:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer/details.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/move.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/iterator.hpp:27:
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:63:1: warning: unused attribute '__abi_tag__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
63 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:9:136: note: expanded from here
9 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:81:1: note: '#pragma clang attribute push' regions ends here
81 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:11:8: note: expanded from here
11 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:54:
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/optimize/newton.hpp:98:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
98 | int ret = 0;
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
1252 | int ret = stan::services::error_codes::CONFIG;
| ^
In file included from stanExports_gqs_loglik.cc:5:
In file included from ./stanExports_gqs_loglik.h:25:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_header.hpp:13:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/indexing.hpp:13:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:7:
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:520:22: warning: unused variable 'rows' [-Wunused-variable]
520 | const Eigen::Index rows = row_idx.ns_.size();
| ^~~~
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:521:22: warning: unused variable 'cols' [-Wunused-variable]
521 | const Eigen::Index cols = col_idx.ns_.size();
| ^~~~
In file included from stanExports_gqs_loglik.cc:5:
./stanExports_gqs_loglik.h:278:12: warning: unused variable 'log_Vc' [-Wunused-variable]
278 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_loglik.h:647:12: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob_impl<false, true, std::vector<double>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
647 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/util/initialize.hpp:130:33: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob<false, true, double>' requested here
130 | log_prob = model.template log_prob<false, Jacobian>(unconstrained,
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_gqs_loglik_namespace::model_gqs_loglik, stan::io::var_context, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
49 | std::vector<double> cont_vector = util::initialize(
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_gqs_loglik_namespace::model_gqs_loglik>' requested here
481 | return_code = stan::services::diagnose::diagnose(model,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_loglik_namespace::model_gqs_loglik, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_loglik.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_loglik_namespace::model_gqs_loglik, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_loglik.cc:5:
./stanExports_gqs_loglik.h:281:12: warning: unused variable 'pi' [-Wunused-variable]
281 | auto pi =
| ^~
./stanExports_gqs_loglik.h:314:12: warning: unused variable 'log_Vc' [-Wunused-variable]
314 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_loglik.h:647:12: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
647 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob<true, true, stan::math::var_value<double>>' requested here
40 | var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/util/initialize.hpp:169:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_gqs_loglik_namespace::model_gqs_loglik>' requested here
169 | log_prob = stan::model::log_prob_grad<true, Jacobian>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_gqs_loglik_namespace::model_gqs_loglik, stan::io::var_context, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
49 | std::vector<double> cont_vector = util::initialize(
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_gqs_loglik_namespace::model_gqs_loglik>' requested here
481 | return_code = stan::services::diagnose::diagnose(model,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_loglik_namespace::model_gqs_loglik, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_loglik.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_loglik_namespace::model_gqs_loglik, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_loglik.cc:5:
./stanExports_gqs_loglik.h:317:12: warning: unused variable 'pi' [-Wunused-variable]
317 | auto pi =
| ^~
./stanExports_gqs_loglik.h:314:12: warning: unused variable 'log_Vc' [-Wunused-variable]
314 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_loglik.h:647:12: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob_impl<true, false, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
647 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob<true, false, stan::math::var_value<double>>' requested here
40 | var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/util/initialize.hpp:169:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, false, model_gqs_loglik_namespace::model_gqs_loglik>' requested here
169 | log_prob = stan::model::log_prob_grad<true, Jacobian>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/optimize/newton.hpp:54:25: note: in instantiation of function template specialization 'stan::services::util::initialize<false, model_gqs_loglik_namespace::model_gqs_loglik, stan::io::var_context, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
54 | cont_vector = util::initialize<false>(model, init, rng, init_radius, false,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:502:35: note: in instantiation of function template specialization 'stan::services::optimize::newton<model_gqs_loglik_namespace::model_gqs_loglik, false>' requested here
502 | = stan::services::optimize::newton(model, *init_context_ptr,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_loglik_namespace::model_gqs_loglik, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_loglik.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_loglik_namespace::model_gqs_loglik, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_loglik.cc:5:
./stanExports_gqs_loglik.h:317:12: warning: unused variable 'pi' [-Wunused-variable]
317 | auto pi =
| ^~
./stanExports_gqs_loglik.h:278:12: warning: unused variable 'log_Vc' [-Wunused-variable]
278 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_loglik.h:647:12: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob_impl<false, false, std::vector<double>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
647 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/optimize/newton.hpp:63:25: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob<false, false, double>' requested here
63 | lp = model.template log_prob<false, jacobian>(cont_vector, disc_vector,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:502:35: note: in instantiation of function template specialization 'stan::services::optimize::newton<model_gqs_loglik_namespace::model_gqs_loglik, false>' requested here
502 | = stan::services::optimize::newton(model, *init_context_ptr,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_loglik_namespace::model_gqs_loglik, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_loglik.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_loglik_namespace::model_gqs_loglik, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_loglik.cc:5:
./stanExports_gqs_loglik.h:281:12: warning: unused variable 'pi' [-Wunused-variable]
281 | auto pi =
| ^~
./stanExports_gqs_loglik.h:314:12: warning: unused variable 'log_Vc' [-Wunused-variable]
314 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_loglik.h:642:12: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob_impl<true, true, Eigen::Matrix<stan::math::var_value<double>, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
642 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_functional.hpp:21:27: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob<true, true, stan::math::var_value<double>>' requested here
21 | return model.template log_prob<true, true, T>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/functor/gradient.hpp:53:16: note: in instantiation of function template specialization 'stan::model::model_functional<model_gqs_loglik_namespace::model_gqs_loglik>::operator()<stan::math::var_value<double>>' requested here
53 | var fx_var = f(x_var);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/gradient.hpp:27:17: note: in instantiation of function template specialization 'stan::math::gradient<stan::model::model_functional<model_gqs_loglik_namespace::model_gqs_loglik>>' requested here
27 | stan::math::gradient(model_functional<M>(model, &ss), x, f, grad_f);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/base_hamiltonian.hpp:63:20: note: in instantiation of function template specialization 'stan::model::gradient<model_gqs_loglik_namespace::model_gqs_loglik>' requested here
63 | stan::model::gradient(model_, z.q, z.V, z.g, logger);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/mcmc/hmc/integrators/expl_leapfrog.hpp:25:17: note: (skipping 5 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all)
25 | hamiltonian.update_potential_gradient(z, logger);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e.hpp:76:48: note: in instantiation of member function 'stan::mcmc::dense_e_nuts<model_gqs_loglik_namespace::model_gqs_loglik, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::dense_e_nuts' requested here
76 | stan::mcmc::dense_e_nuts<Model, stan::rng_t> sampler(model, rng);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e.hpp:133:10: note: in instantiation of function template specialization 'stan::services::sample::hmc_nuts_dense_e<model_gqs_loglik_namespace::model_gqs_loglik>' requested here
133 | return hmc_nuts_dense_e(model, init, default_metric, random_seed, chain,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:621:13: note: in instantiation of function template specialization 'stan::services::sample::hmc_nuts_dense_e<model_gqs_loglik_namespace::model_gqs_loglik>' requested here
621 | ::hmc_nuts_dense_e(model, *init_context_ptr,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_loglik_namespace::model_gqs_loglik, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_loglik.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_loglik_namespace::model_gqs_loglik, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_loglik.cc:5:
./stanExports_gqs_loglik.h:317:12: warning: unused variable 'pi' [-Wunused-variable]
317 | auto pi =
| ^~
./stanExports_gqs_loglik.h:278:12: warning: unused variable 'log_Vc' [-Wunused-variable]
278 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_loglik.h:642:12: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob_impl<false, true, Eigen::Matrix<double, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
642 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/variational/advi.hpp:512:31: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob<false, true, double>' requested here
512 | log_p = model_.template log_prob<false, true>(cont_params_, &msg2);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/experimental/advi/fullrank.hpp:90:14: note: in instantiation of member function 'stan::variational::advi<model_gqs_loglik_namespace::model_gqs_loglik, stan::variational::normal_fullrank, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::run' requested here
90 | cmd_advi.run(eta, adapt_engaged, adapt_iterations, tol_rel_obj,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:890:9: note: in instantiation of function template specialization 'stan::services::experimental::advi::fullrank<model_gqs_loglik_namespace::model_gqs_loglik>' requested here
890 | ::fullrank(model, *init_context_ptr,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_loglik_namespace::model_gqs_loglik, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_loglik.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_loglik_namespace::model_gqs_loglik, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_loglik.cc:5:
./stanExports_gqs_loglik.h:281:12: warning: unused variable 'pi' [-Wunused-variable]
281 | auto pi =
| ^~
./stanExports_gqs_loglik.h:278:12: warning: unused variable 'log_Vc' [-Wunused-variable]
278 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_loglik.h:642:12: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob_impl<false, false, Eigen::Matrix<double, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
642 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:93:50: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob<false, false, double>' requested here
93 | return static_cast<const M*>(this)->template log_prob<false, false, double>(
| ^
./stanExports_gqs_loglik.h:87:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_loglik_namespace::model_gqs_loglik>::log_prob' requested here
87 | ~model_gqs_loglik() {}
| ^
./stanExports_gqs_loglik.h:281:12: warning: unused variable 'pi' [-Wunused-variable]
281 | auto pi =
| ^~
./stanExports_gqs_loglik.h:314:12: warning: unused variable 'log_Vc' [-Wunused-variable]
314 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_loglik.h:642:12: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob_impl<false, false, Eigen::Matrix<stan::math::var_value<double>, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
642 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:98:50: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob<false, false, stan::math::var_value<double>>' requested here
98 | return static_cast<const M*>(this)->template log_prob<false, false>(theta,
| ^
./stanExports_gqs_loglik.h:87:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_loglik_namespace::model_gqs_loglik>::log_prob' requested here
87 | ~model_gqs_loglik() {}
| ^
./stanExports_gqs_loglik.h:317:12: warning: unused variable 'pi' [-Wunused-variable]
317 | auto pi =
| ^~
./stanExports_gqs_loglik.h:314:12: warning: unused variable 'log_Vc' [-Wunused-variable]
314 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_loglik.h:642:12: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob_impl<false, true, Eigen::Matrix<stan::math::var_value<double>, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
642 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:109:50: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob<false, true, stan::math::var_value<double>>' requested here
109 | return static_cast<const M*>(this)->template log_prob<false, true>(theta,
| ^
./stanExports_gqs_loglik.h:87:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_loglik_namespace::model_gqs_loglik>::log_prob_jacobian' requested here
87 | ~model_gqs_loglik() {}
| ^
./stanExports_gqs_loglik.h:317:12: warning: unused variable 'pi' [-Wunused-variable]
317 | auto pi =
| ^~
./stanExports_gqs_loglik.h:278:12: warning: unused variable 'log_Vc' [-Wunused-variable]
278 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_loglik.h:642:12: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob_impl<true, false, Eigen::Matrix<double, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
642 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:115:50: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob<true, false, double>' requested here
115 | return static_cast<const M*>(this)->template log_prob<true, false>(theta,
| ^
./stanExports_gqs_loglik.h:87:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_loglik_namespace::model_gqs_loglik>::log_prob_propto' requested here
87 | ~model_gqs_loglik() {}
| ^
./stanExports_gqs_loglik.h:281:12: warning: unused variable 'pi' [-Wunused-variable]
281 | auto pi =
| ^~
./stanExports_gqs_loglik.h:314:12: warning: unused variable 'log_Vc' [-Wunused-variable]
314 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_loglik.h:642:12: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob_impl<true, false, Eigen::Matrix<stan::math::var_value<double>, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
642 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:120:50: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob<true, false, stan::math::var_value<double>>' requested here
120 | return static_cast<const M*>(this)->template log_prob<true, false>(theta,
| ^
./stanExports_gqs_loglik.h:87:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_loglik_namespace::model_gqs_loglik>::log_prob_propto' requested here
87 | ~model_gqs_loglik() {}
| ^
./stanExports_gqs_loglik.h:317:12: warning: unused variable 'pi' [-Wunused-variable]
317 | auto pi =
| ^~
./stanExports_gqs_loglik.h:278:12: warning: unused variable 'log_Vc' [-Wunused-variable]
278 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_loglik.h:642:12: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob_impl<true, true, Eigen::Matrix<double, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
642 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:126:50: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob<true, true, double>' requested here
126 | return static_cast<const M*>(this)->template log_prob<true, true>(theta,
| ^
./stanExports_gqs_loglik.h:87:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_loglik_namespace::model_gqs_loglik>::log_prob_propto_jacobian' requested here
87 | ~model_gqs_loglik() {}
| ^
./stanExports_gqs_loglik.h:281:12: warning: unused variable 'pi' [-Wunused-variable]
281 | auto pi =
| ^~
./stanExports_gqs_loglik.h:314:12: warning: unused variable 'log_Vc' [-Wunused-variable]
314 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_loglik.h:647:12: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob_impl<false, false, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
647 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:162:50: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob<false, false, stan::math::var_value<double>>' requested here
162 | return static_cast<const M*>(this)->template log_prob<false, false>(
| ^
./stanExports_gqs_loglik.h:87:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_loglik_namespace::model_gqs_loglik>::log_prob' requested here
87 | ~model_gqs_loglik() {}
| ^
./stanExports_gqs_loglik.h:317:12: warning: unused variable 'pi' [-Wunused-variable]
317 | auto pi =
| ^~
./stanExports_gqs_loglik.h:314:12: warning: unused variable 'log_Vc' [-Wunused-variable]
314 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_loglik.h:647:12: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob_impl<false, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
647 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:175:50: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob<false, true, stan::math::var_value<double>>' requested here
175 | return static_cast<const M*>(this)->template log_prob<false, true>(
| ^
./stanExports_gqs_loglik.h:87:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_loglik_namespace::model_gqs_loglik>::log_prob_jacobian' requested here
87 | ~model_gqs_loglik() {}
| ^
./stanExports_gqs_loglik.h:317:12: warning: unused variable 'pi' [-Wunused-variable]
317 | auto pi =
| ^~
./stanExports_gqs_loglik.h:278:12: warning: unused variable 'log_Vc' [-Wunused-variable]
278 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_loglik.h:647:12: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob_impl<true, false, std::vector<double>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
647 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:182:50: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob<true, false, double>' requested here
182 | return static_cast<const M*>(this)->template log_prob<true, false>(
| ^
./stanExports_gqs_loglik.h:87:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_loglik_namespace::model_gqs_loglik>::log_prob_propto' requested here
87 | ~model_gqs_loglik() {}
| ^
./stanExports_gqs_loglik.h:281:12: warning: unused variable 'pi' [-Wunused-variable]
281 | auto pi =
| ^~
./stanExports_gqs_loglik.h:278:12: warning: unused variable 'log_Vc' [-Wunused-variable]
278 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_loglik.h:647:12: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob_impl<true, true, std::vector<double>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
647 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:195:50: note: in instantiation of function template specialization 'model_gqs_loglik_namespace::model_gqs_loglik::log_prob<true, true, double>' requested here
195 | return static_cast<const M*>(this)->template log_prob<true, true>(
| ^
./stanExports_gqs_loglik.h:87:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_loglik_namespace::model_gqs_loglik>::log_prob_propto_jacobian' requested here
87 | ~model_gqs_loglik() {}
| ^
./stanExports_gqs_loglik.h:281:12: warning: unused variable 'pi' [-Wunused-variable]
281 | auto pi =
| ^~
60 warnings generated.
/usr/local/clang23/bin/clang++ -std=gnu++17 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I"../inst/include" -I"/data/localhost/ripley/R/test-clang/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/data/localhost/ripley/R/test-clang/BH/include' -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppEigen/include' -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -I'/data/localhost/ripley/R/test-clang/rstan/include' -I'/data/localhost/ripley/R/test-clang/StanHeaders/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/data/localhost/ripley/R/test-clang/RcppParallel/include -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c stanExports_gqs_ppmc.cc -o stanExports_gqs_ppmc.o
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:21:
/data/localhost/ripley/R/test-clang/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
47 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/usr/local/clang23/bin/../include/c++/v1/streambuf:381:22: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
381 | virtual streamsize xsputn(const char_type* __s, streamsize __n) {
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:21:
/data/localhost/ripley/R/test-clang/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
70 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/usr/local/clang23/bin/../include/c++/v1/streambuf:381:22: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
381 | virtual streamsize xsputn(const char_type* __s, streamsize __n) {
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:11:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/constraint.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/abs.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__exclude_from_explicit_instantiation__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
29 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:21:69: note: expanded from here
21 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
61 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:23:8: note: expanded from here
23 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:11:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/constraint.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/abs.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__visibility__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
29 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:21:110: note: expanded from here
21 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
61 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:23:8: note: expanded from here
23 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:11:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/constraint.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/abs.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__abi_tag__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
29 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:21:136: note: expanded from here
21 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
61 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:23:8: note: expanded from here
23 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:34:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:131:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:39:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/linear_algebra.hpp:20:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:40:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/unscale.hpp:28:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:21:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:18:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/prob.hpp:290:
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/prob/student_t_qf.hpp:74:32: warning: unused variable 'function' [-Wunused-variable]
74 | static constexpr const char* function = "student_t_qf";
| ^~~~~~~~
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:49:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:16:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/prob.hpp:7:
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:52:20: warning: unused variable 'p_val_flip' [-Wunused-variable]
52 | const double p_val_flip = p_val < 0.5 ? p_val : 1.0 - p_val;
| ^~~~~~~~~~
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:42:18: warning: unused variable 'sqrt_inv_ibeta_m1' [-Wunused-variable]
42 | const double sqrt_inv_ibeta_m1 = sqrt(inv(ibeta_arg) - 1.0);
| ^~~~~~~~~~~~~~~~~
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:50:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/experimental/advi/fullrank.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/variational/advi.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer.hpp:57:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer/details.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/move.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/iterator.hpp:27:
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:63:1: warning: unused attribute '__exclude_from_explicit_instantiation__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
63 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:9:69: note: expanded from here
9 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:81:1: note: '#pragma clang attribute push' regions ends here
81 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:11:8: note: expanded from here
11 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:50:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/experimental/advi/fullrank.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/variational/advi.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer.hpp:57:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer/details.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/move.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/iterator.hpp:27:
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:63:1: warning: unused attribute '__visibility__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
63 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:9:110: note: expanded from here
9 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:81:1: note: '#pragma clang attribute push' regions ends here
81 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:11:8: note: expanded from here
11 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:50:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/experimental/advi/fullrank.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/variational/advi.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer.hpp:57:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer/details.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/move.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/iterator.hpp:27:
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:63:1: warning: unused attribute '__abi_tag__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
63 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:9:136: note: expanded from here
9 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:81:1: note: '#pragma clang attribute push' regions ends here
81 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:11:8: note: expanded from here
11 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:54:
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/optimize/newton.hpp:98:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
98 | int ret = 0;
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
1252 | int ret = stan::services::error_codes::CONFIG;
| ^
In file included from stanExports_gqs_ppmc.cc:5:
In file included from ./stanExports_gqs_ppmc.h:25:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_header.hpp:13:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/indexing.hpp:13:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:7:
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:520:22: warning: unused variable 'rows' [-Wunused-variable]
520 | const Eigen::Index rows = row_idx.ns_.size();
| ^~~~
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:521:22: warning: unused variable 'cols' [-Wunused-variable]
521 | const Eigen::Index cols = col_idx.ns_.size();
| ^~~~
In file included from stanExports_gqs_ppmc.cc:5:
./stanExports_gqs_ppmc.h:277:12: warning: unused variable 'log_Vc' [-Wunused-variable]
277 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc.h:642:12: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob_impl<false, true, std::vector<double>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
642 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/util/initialize.hpp:130:33: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob<false, true, double>' requested here
130 | log_prob = model.template log_prob<false, Jacobian>(unconstrained,
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_gqs_ppmc_namespace::model_gqs_ppmc, stan::io::var_context, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
49 | std::vector<double> cont_vector = util::initialize(
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_gqs_ppmc_namespace::model_gqs_ppmc>' requested here
481 | return_code = stan::services::diagnose::diagnose(model,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_ppmc_namespace::model_gqs_ppmc, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_ppmc.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_ppmc_namespace::model_gqs_ppmc, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_ppmc.cc:5:
./stanExports_gqs_ppmc.h:280:12: warning: unused variable 'pi' [-Wunused-variable]
280 | auto pi =
| ^~
./stanExports_gqs_ppmc.h:313:12: warning: unused variable 'log_Vc' [-Wunused-variable]
313 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc.h:642:12: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
642 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob<true, true, stan::math::var_value<double>>' requested here
40 | var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/util/initialize.hpp:169:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_gqs_ppmc_namespace::model_gqs_ppmc>' requested here
169 | log_prob = stan::model::log_prob_grad<true, Jacobian>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_gqs_ppmc_namespace::model_gqs_ppmc, stan::io::var_context, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
49 | std::vector<double> cont_vector = util::initialize(
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_gqs_ppmc_namespace::model_gqs_ppmc>' requested here
481 | return_code = stan::services::diagnose::diagnose(model,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_ppmc_namespace::model_gqs_ppmc, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_ppmc.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_ppmc_namespace::model_gqs_ppmc, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_ppmc.cc:5:
./stanExports_gqs_ppmc.h:316:12: warning: unused variable 'pi' [-Wunused-variable]
316 | auto pi =
| ^~
./stanExports_gqs_ppmc.h:313:12: warning: unused variable 'log_Vc' [-Wunused-variable]
313 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc.h:642:12: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob_impl<true, false, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
642 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob<true, false, stan::math::var_value<double>>' requested here
40 | var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/util/initialize.hpp:169:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, false, model_gqs_ppmc_namespace::model_gqs_ppmc>' requested here
169 | log_prob = stan::model::log_prob_grad<true, Jacobian>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/optimize/newton.hpp:54:25: note: in instantiation of function template specialization 'stan::services::util::initialize<false, model_gqs_ppmc_namespace::model_gqs_ppmc, stan::io::var_context, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
54 | cont_vector = util::initialize<false>(model, init, rng, init_radius, false,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:502:35: note: in instantiation of function template specialization 'stan::services::optimize::newton<model_gqs_ppmc_namespace::model_gqs_ppmc, false>' requested here
502 | = stan::services::optimize::newton(model, *init_context_ptr,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_ppmc_namespace::model_gqs_ppmc, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_ppmc.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_ppmc_namespace::model_gqs_ppmc, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_ppmc.cc:5:
./stanExports_gqs_ppmc.h:316:12: warning: unused variable 'pi' [-Wunused-variable]
316 | auto pi =
| ^~
./stanExports_gqs_ppmc.h:277:12: warning: unused variable 'log_Vc' [-Wunused-variable]
277 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc.h:642:12: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob_impl<false, false, std::vector<double>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
642 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/optimize/newton.hpp:63:25: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob<false, false, double>' requested here
63 | lp = model.template log_prob<false, jacobian>(cont_vector, disc_vector,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:502:35: note: in instantiation of function template specialization 'stan::services::optimize::newton<model_gqs_ppmc_namespace::model_gqs_ppmc, false>' requested here
502 | = stan::services::optimize::newton(model, *init_context_ptr,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_ppmc_namespace::model_gqs_ppmc, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_ppmc.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_ppmc_namespace::model_gqs_ppmc, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_ppmc.cc:5:
./stanExports_gqs_ppmc.h:280:12: warning: unused variable 'pi' [-Wunused-variable]
280 | auto pi =
| ^~
./stanExports_gqs_ppmc.h:313:12: warning: unused variable 'log_Vc' [-Wunused-variable]
313 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc.h:637:12: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob_impl<true, true, Eigen::Matrix<stan::math::var_value<double>, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
637 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_functional.hpp:21:27: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob<true, true, stan::math::var_value<double>>' requested here
21 | return model.template log_prob<true, true, T>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/functor/gradient.hpp:53:16: note: in instantiation of function template specialization 'stan::model::model_functional<model_gqs_ppmc_namespace::model_gqs_ppmc>::operator()<stan::math::var_value<double>>' requested here
53 | var fx_var = f(x_var);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/gradient.hpp:27:17: note: in instantiation of function template specialization 'stan::math::gradient<stan::model::model_functional<model_gqs_ppmc_namespace::model_gqs_ppmc>>' requested here
27 | stan::math::gradient(model_functional<M>(model, &ss), x, f, grad_f);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/base_hamiltonian.hpp:63:20: note: in instantiation of function template specialization 'stan::model::gradient<model_gqs_ppmc_namespace::model_gqs_ppmc>' requested here
63 | stan::model::gradient(model_, z.q, z.V, z.g, logger);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/mcmc/hmc/integrators/expl_leapfrog.hpp:25:17: note: (skipping 5 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all)
25 | hamiltonian.update_potential_gradient(z, logger);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e.hpp:76:48: note: in instantiation of member function 'stan::mcmc::dense_e_nuts<model_gqs_ppmc_namespace::model_gqs_ppmc, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::dense_e_nuts' requested here
76 | stan::mcmc::dense_e_nuts<Model, stan::rng_t> sampler(model, rng);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e.hpp:133:10: note: in instantiation of function template specialization 'stan::services::sample::hmc_nuts_dense_e<model_gqs_ppmc_namespace::model_gqs_ppmc>' requested here
133 | return hmc_nuts_dense_e(model, init, default_metric, random_seed, chain,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:621:13: note: in instantiation of function template specialization 'stan::services::sample::hmc_nuts_dense_e<model_gqs_ppmc_namespace::model_gqs_ppmc>' requested here
621 | ::hmc_nuts_dense_e(model, *init_context_ptr,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_ppmc_namespace::model_gqs_ppmc, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_ppmc.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_ppmc_namespace::model_gqs_ppmc, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_ppmc.cc:5:
./stanExports_gqs_ppmc.h:316:12: warning: unused variable 'pi' [-Wunused-variable]
316 | auto pi =
| ^~
./stanExports_gqs_ppmc.h:277:12: warning: unused variable 'log_Vc' [-Wunused-variable]
277 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc.h:637:12: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob_impl<false, true, Eigen::Matrix<double, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
637 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/variational/advi.hpp:512:31: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob<false, true, double>' requested here
512 | log_p = model_.template log_prob<false, true>(cont_params_, &msg2);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/experimental/advi/fullrank.hpp:90:14: note: in instantiation of member function 'stan::variational::advi<model_gqs_ppmc_namespace::model_gqs_ppmc, stan::variational::normal_fullrank, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::run' requested here
90 | cmd_advi.run(eta, adapt_engaged, adapt_iterations, tol_rel_obj,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:890:9: note: in instantiation of function template specialization 'stan::services::experimental::advi::fullrank<model_gqs_ppmc_namespace::model_gqs_ppmc>' requested here
890 | ::fullrank(model, *init_context_ptr,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_ppmc_namespace::model_gqs_ppmc, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_ppmc.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_ppmc_namespace::model_gqs_ppmc, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_ppmc.cc:5:
./stanExports_gqs_ppmc.h:280:12: warning: unused variable 'pi' [-Wunused-variable]
280 | auto pi =
| ^~
./stanExports_gqs_ppmc.h:277:12: warning: unused variable 'log_Vc' [-Wunused-variable]
277 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc.h:637:12: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob_impl<false, false, Eigen::Matrix<double, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
637 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:93:50: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob<false, false, double>' requested here
93 | return static_cast<const M*>(this)->template log_prob<false, false, double>(
| ^
./stanExports_gqs_ppmc.h:84:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_ppmc_namespace::model_gqs_ppmc>::log_prob' requested here
84 | ~model_gqs_ppmc() {}
| ^
./stanExports_gqs_ppmc.h:280:12: warning: unused variable 'pi' [-Wunused-variable]
280 | auto pi =
| ^~
./stanExports_gqs_ppmc.h:313:12: warning: unused variable 'log_Vc' [-Wunused-variable]
313 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc.h:637:12: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob_impl<false, false, Eigen::Matrix<stan::math::var_value<double>, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
637 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:98:50: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob<false, false, stan::math::var_value<double>>' requested here
98 | return static_cast<const M*>(this)->template log_prob<false, false>(theta,
| ^
./stanExports_gqs_ppmc.h:84:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_ppmc_namespace::model_gqs_ppmc>::log_prob' requested here
84 | ~model_gqs_ppmc() {}
| ^
./stanExports_gqs_ppmc.h:316:12: warning: unused variable 'pi' [-Wunused-variable]
316 | auto pi =
| ^~
./stanExports_gqs_ppmc.h:313:12: warning: unused variable 'log_Vc' [-Wunused-variable]
313 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc.h:637:12: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob_impl<false, true, Eigen::Matrix<stan::math::var_value<double>, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
637 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:109:50: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob<false, true, stan::math::var_value<double>>' requested here
109 | return static_cast<const M*>(this)->template log_prob<false, true>(theta,
| ^
./stanExports_gqs_ppmc.h:84:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_ppmc_namespace::model_gqs_ppmc>::log_prob_jacobian' requested here
84 | ~model_gqs_ppmc() {}
| ^
./stanExports_gqs_ppmc.h:316:12: warning: unused variable 'pi' [-Wunused-variable]
316 | auto pi =
| ^~
./stanExports_gqs_ppmc.h:277:12: warning: unused variable 'log_Vc' [-Wunused-variable]
277 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc.h:637:12: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob_impl<true, false, Eigen::Matrix<double, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
637 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:115:50: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob<true, false, double>' requested here
115 | return static_cast<const M*>(this)->template log_prob<true, false>(theta,
| ^
./stanExports_gqs_ppmc.h:84:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_ppmc_namespace::model_gqs_ppmc>::log_prob_propto' requested here
84 | ~model_gqs_ppmc() {}
| ^
./stanExports_gqs_ppmc.h:280:12: warning: unused variable 'pi' [-Wunused-variable]
280 | auto pi =
| ^~
./stanExports_gqs_ppmc.h:313:12: warning: unused variable 'log_Vc' [-Wunused-variable]
313 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc.h:637:12: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob_impl<true, false, Eigen::Matrix<stan::math::var_value<double>, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
637 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:120:50: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob<true, false, stan::math::var_value<double>>' requested here
120 | return static_cast<const M*>(this)->template log_prob<true, false>(theta,
| ^
./stanExports_gqs_ppmc.h:84:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_ppmc_namespace::model_gqs_ppmc>::log_prob_propto' requested here
84 | ~model_gqs_ppmc() {}
| ^
./stanExports_gqs_ppmc.h:316:12: warning: unused variable 'pi' [-Wunused-variable]
316 | auto pi =
| ^~
./stanExports_gqs_ppmc.h:277:12: warning: unused variable 'log_Vc' [-Wunused-variable]
277 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc.h:637:12: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob_impl<true, true, Eigen::Matrix<double, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
637 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:126:50: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob<true, true, double>' requested here
126 | return static_cast<const M*>(this)->template log_prob<true, true>(theta,
| ^
./stanExports_gqs_ppmc.h:84:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_ppmc_namespace::model_gqs_ppmc>::log_prob_propto_jacobian' requested here
84 | ~model_gqs_ppmc() {}
| ^
./stanExports_gqs_ppmc.h:280:12: warning: unused variable 'pi' [-Wunused-variable]
280 | auto pi =
| ^~
./stanExports_gqs_ppmc.h:313:12: warning: unused variable 'log_Vc' [-Wunused-variable]
313 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc.h:642:12: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob_impl<false, false, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
642 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:162:50: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob<false, false, stan::math::var_value<double>>' requested here
162 | return static_cast<const M*>(this)->template log_prob<false, false>(
| ^
./stanExports_gqs_ppmc.h:84:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_ppmc_namespace::model_gqs_ppmc>::log_prob' requested here
84 | ~model_gqs_ppmc() {}
| ^
./stanExports_gqs_ppmc.h:316:12: warning: unused variable 'pi' [-Wunused-variable]
316 | auto pi =
| ^~
./stanExports_gqs_ppmc.h:313:12: warning: unused variable 'log_Vc' [-Wunused-variable]
313 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc.h:642:12: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob_impl<false, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
642 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:175:50: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob<false, true, stan::math::var_value<double>>' requested here
175 | return static_cast<const M*>(this)->template log_prob<false, true>(
| ^
./stanExports_gqs_ppmc.h:84:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_ppmc_namespace::model_gqs_ppmc>::log_prob_jacobian' requested here
84 | ~model_gqs_ppmc() {}
| ^
./stanExports_gqs_ppmc.h:316:12: warning: unused variable 'pi' [-Wunused-variable]
316 | auto pi =
| ^~
./stanExports_gqs_ppmc.h:277:12: warning: unused variable 'log_Vc' [-Wunused-variable]
277 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc.h:642:12: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob_impl<true, false, std::vector<double>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
642 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:182:50: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob<true, false, double>' requested here
182 | return static_cast<const M*>(this)->template log_prob<true, false>(
| ^
./stanExports_gqs_ppmc.h:84:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_ppmc_namespace::model_gqs_ppmc>::log_prob_propto' requested here
84 | ~model_gqs_ppmc() {}
| ^
./stanExports_gqs_ppmc.h:280:12: warning: unused variable 'pi' [-Wunused-variable]
280 | auto pi =
| ^~
./stanExports_gqs_ppmc.h:277:12: warning: unused variable 'log_Vc' [-Wunused-variable]
277 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc.h:642:12: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob_impl<true, true, std::vector<double>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
642 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:195:50: note: in instantiation of function template specialization 'model_gqs_ppmc_namespace::model_gqs_ppmc::log_prob<true, true, double>' requested here
195 | return static_cast<const M*>(this)->template log_prob<true, true>(
| ^
./stanExports_gqs_ppmc.h:84:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_ppmc_namespace::model_gqs_ppmc>::log_prob_propto_jacobian' requested here
84 | ~model_gqs_ppmc() {}
| ^
./stanExports_gqs_ppmc.h:280:12: warning: unused variable 'pi' [-Wunused-variable]
280 | auto pi =
| ^~
60 warnings generated.
/usr/local/clang23/bin/clang++ -std=gnu++17 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I"../inst/include" -I"/data/localhost/ripley/R/test-clang/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/data/localhost/ripley/R/test-clang/BH/include' -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppEigen/include' -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -I'/data/localhost/ripley/R/test-clang/rstan/include' -I'/data/localhost/ripley/R/test-clang/StanHeaders/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/data/localhost/ripley/R/test-clang/RcppParallel/include -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c stanExports_gqs_ppmc_probs.cc -o stanExports_gqs_ppmc_probs.o
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:21:
/data/localhost/ripley/R/test-clang/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
47 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/usr/local/clang23/bin/../include/c++/v1/streambuf:381:22: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
381 | virtual streamsize xsputn(const char_type* __s, streamsize __n) {
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:21:
/data/localhost/ripley/R/test-clang/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
70 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/usr/local/clang23/bin/../include/c++/v1/streambuf:381:22: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
381 | virtual streamsize xsputn(const char_type* __s, streamsize __n) {
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:11:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/constraint.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/abs.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__exclude_from_explicit_instantiation__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
29 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:21:69: note: expanded from here
21 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
61 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:23:8: note: expanded from here
23 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:11:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/constraint.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/abs.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__visibility__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
29 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:21:110: note: expanded from here
21 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
61 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:23:8: note: expanded from here
23 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:11:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/constraint.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/abs.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__abi_tag__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
29 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:21:136: note: expanded from here
21 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
61 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:23:8: note: expanded from here
23 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:34:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:131:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:39:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/linear_algebra.hpp:20:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:40:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/unscale.hpp:28:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:21:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:18:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/prob.hpp:290:
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/prob/student_t_qf.hpp:74:32: warning: unused variable 'function' [-Wunused-variable]
74 | static constexpr const char* function = "student_t_qf";
| ^~~~~~~~
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:49:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:16:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/prob.hpp:7:
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:52:20: warning: unused variable 'p_val_flip' [-Wunused-variable]
52 | const double p_val_flip = p_val < 0.5 ? p_val : 1.0 - p_val;
| ^~~~~~~~~~
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:42:18: warning: unused variable 'sqrt_inv_ibeta_m1' [-Wunused-variable]
42 | const double sqrt_inv_ibeta_m1 = sqrt(inv(ibeta_arg) - 1.0);
| ^~~~~~~~~~~~~~~~~
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:50:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/experimental/advi/fullrank.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/variational/advi.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer.hpp:57:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer/details.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/move.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/iterator.hpp:27:
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:63:1: warning: unused attribute '__exclude_from_explicit_instantiation__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
63 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:9:69: note: expanded from here
9 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:81:1: note: '#pragma clang attribute push' regions ends here
81 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:11:8: note: expanded from here
11 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:50:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/experimental/advi/fullrank.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/variational/advi.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer.hpp:57:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer/details.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/move.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/iterator.hpp:27:
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:63:1: warning: unused attribute '__visibility__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
63 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:9:110: note: expanded from here
9 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:81:1: note: '#pragma clang attribute push' regions ends here
81 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:11:8: note: expanded from here
11 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:50:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/experimental/advi/fullrank.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/variational/advi.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer.hpp:57:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer/details.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/move.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/iterator.hpp:27:
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:63:1: warning: unused attribute '__abi_tag__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
63 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:9:136: note: expanded from here
9 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:81:1: note: '#pragma clang attribute push' regions ends here
81 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:11:8: note: expanded from here
11 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:54:
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/optimize/newton.hpp:98:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
98 | int ret = 0;
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
1252 | int ret = stan::services::error_codes::CONFIG;
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
In file included from ./stanExports_gqs_ppmc_probs.h:25:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_header.hpp:13:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/indexing.hpp:13:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:7:
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:520:22: warning: unused variable 'rows' [-Wunused-variable]
520 | const Eigen::Index rows = row_idx.ns_.size();
| ^~~~
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:521:22: warning: unused variable 'cols' [-Wunused-variable]
521 | const Eigen::Index cols = col_idx.ns_.size();
| ^~~~
In file included from stanExports_gqs_ppmc_probs.cc:5:
./stanExports_gqs_ppmc_probs.h:315:12: warning: unused variable 'log_Vc' [-Wunused-variable]
315 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc_probs.h:800:12: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob_impl<false, true, std::vector<double>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
800 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/util/initialize.hpp:130:33: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob<false, true, double>' requested here
130 | log_prob = model.template log_prob<false, Jacobian>(unconstrained,
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs, stan::io::var_context, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
49 | std::vector<double> cont_vector = util::initialize(
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs>' requested here
481 | return_code = stan::services::diagnose::diagnose(model,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_ppmc_probs.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
./stanExports_gqs_ppmc_probs.h:318:12: warning: unused variable 'pi' [-Wunused-variable]
318 | auto pi =
| ^~
./stanExports_gqs_ppmc_probs.h:351:12: warning: unused variable 'log_Vc' [-Wunused-variable]
351 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc_probs.h:800:12: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
800 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob<true, true, stan::math::var_value<double>>' requested here
40 | var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/util/initialize.hpp:169:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs>' requested here
169 | log_prob = stan::model::log_prob_grad<true, Jacobian>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs, stan::io::var_context, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
49 | std::vector<double> cont_vector = util::initialize(
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs>' requested here
481 | return_code = stan::services::diagnose::diagnose(model,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_ppmc_probs.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
./stanExports_gqs_ppmc_probs.h:354:12: warning: unused variable 'pi' [-Wunused-variable]
354 | auto pi =
| ^~
./stanExports_gqs_ppmc_probs.h:351:12: warning: unused variable 'log_Vc' [-Wunused-variable]
351 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc_probs.h:800:12: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob_impl<true, false, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
800 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob<true, false, stan::math::var_value<double>>' requested here
40 | var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/util/initialize.hpp:169:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, false, model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs>' requested here
169 | log_prob = stan::model::log_prob_grad<true, Jacobian>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/optimize/newton.hpp:54:25: note: in instantiation of function template specialization 'stan::services::util::initialize<false, model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs, stan::io::var_context, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
54 | cont_vector = util::initialize<false>(model, init, rng, init_radius, false,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:502:35: note: in instantiation of function template specialization 'stan::services::optimize::newton<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs, false>' requested here
502 | = stan::services::optimize::newton(model, *init_context_ptr,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_ppmc_probs.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
./stanExports_gqs_ppmc_probs.h:354:12: warning: unused variable 'pi' [-Wunused-variable]
354 | auto pi =
| ^~
./stanExports_gqs_ppmc_probs.h:315:12: warning: unused variable 'log_Vc' [-Wunused-variable]
315 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc_probs.h:800:12: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob_impl<false, false, std::vector<double>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
800 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/optimize/newton.hpp:63:25: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob<false, false, double>' requested here
63 | lp = model.template log_prob<false, jacobian>(cont_vector, disc_vector,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:502:35: note: in instantiation of function template specialization 'stan::services::optimize::newton<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs, false>' requested here
502 | = stan::services::optimize::newton(model, *init_context_ptr,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_ppmc_probs.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
./stanExports_gqs_ppmc_probs.h:318:12: warning: unused variable 'pi' [-Wunused-variable]
318 | auto pi =
| ^~
./stanExports_gqs_ppmc_probs.h:351:12: warning: unused variable 'log_Vc' [-Wunused-variable]
351 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc_probs.h:795:12: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob_impl<true, true, Eigen::Matrix<stan::math::var_value<double>, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
795 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_functional.hpp:21:27: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob<true, true, stan::math::var_value<double>>' requested here
21 | return model.template log_prob<true, true, T>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/functor/gradient.hpp:53:16: note: in instantiation of function template specialization 'stan::model::model_functional<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs>::operator()<stan::math::var_value<double>>' requested here
53 | var fx_var = f(x_var);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/gradient.hpp:27:17: note: in instantiation of function template specialization 'stan::math::gradient<stan::model::model_functional<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs>>' requested here
27 | stan::math::gradient(model_functional<M>(model, &ss), x, f, grad_f);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/base_hamiltonian.hpp:63:20: note: in instantiation of function template specialization 'stan::model::gradient<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs>' requested here
63 | stan::model::gradient(model_, z.q, z.V, z.g, logger);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/mcmc/hmc/integrators/expl_leapfrog.hpp:25:17: note: (skipping 5 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all)
25 | hamiltonian.update_potential_gradient(z, logger);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e.hpp:76:48: note: in instantiation of member function 'stan::mcmc::dense_e_nuts<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::dense_e_nuts' requested here
76 | stan::mcmc::dense_e_nuts<Model, stan::rng_t> sampler(model, rng);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e.hpp:133:10: note: in instantiation of function template specialization 'stan::services::sample::hmc_nuts_dense_e<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs>' requested here
133 | return hmc_nuts_dense_e(model, init, default_metric, random_seed, chain,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:621:13: note: in instantiation of function template specialization 'stan::services::sample::hmc_nuts_dense_e<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs>' requested here
621 | ::hmc_nuts_dense_e(model, *init_context_ptr,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_ppmc_probs.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
./stanExports_gqs_ppmc_probs.h:354:12: warning: unused variable 'pi' [-Wunused-variable]
354 | auto pi =
| ^~
./stanExports_gqs_ppmc_probs.h:315:12: warning: unused variable 'log_Vc' [-Wunused-variable]
315 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc_probs.h:795:12: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob_impl<false, true, Eigen::Matrix<double, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
795 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/variational/advi.hpp:512:31: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob<false, true, double>' requested here
512 | log_p = model_.template log_prob<false, true>(cont_params_, &msg2);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/experimental/advi/fullrank.hpp:90:14: note: in instantiation of member function 'stan::variational::advi<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs, stan::variational::normal_fullrank, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::run' requested here
90 | cmd_advi.run(eta, adapt_engaged, adapt_iterations, tol_rel_obj,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:890:9: note: in instantiation of function template specialization 'stan::services::experimental::advi::fullrank<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs>' requested here
890 | ::fullrank(model, *init_context_ptr,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_ppmc_probs.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_ppmc_probs.cc:5:
./stanExports_gqs_ppmc_probs.h:318:12: warning: unused variable 'pi' [-Wunused-variable]
318 | auto pi =
| ^~
./stanExports_gqs_ppmc_probs.h:315:12: warning: unused variable 'log_Vc' [-Wunused-variable]
315 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc_probs.h:795:12: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob_impl<false, false, Eigen::Matrix<double, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
795 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:93:50: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob<false, false, double>' requested here
93 | return static_cast<const M*>(this)->template log_prob<false, false, double>(
| ^
./stanExports_gqs_ppmc_probs.h:114:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs>::log_prob' requested here
114 | ~model_gqs_ppmc_probs() {}
| ^
./stanExports_gqs_ppmc_probs.h:318:12: warning: unused variable 'pi' [-Wunused-variable]
318 | auto pi =
| ^~
./stanExports_gqs_ppmc_probs.h:351:12: warning: unused variable 'log_Vc' [-Wunused-variable]
351 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc_probs.h:795:12: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob_impl<false, false, Eigen::Matrix<stan::math::var_value<double>, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
795 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:98:50: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob<false, false, stan::math::var_value<double>>' requested here
98 | return static_cast<const M*>(this)->template log_prob<false, false>(theta,
| ^
./stanExports_gqs_ppmc_probs.h:114:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs>::log_prob' requested here
114 | ~model_gqs_ppmc_probs() {}
| ^
./stanExports_gqs_ppmc_probs.h:354:12: warning: unused variable 'pi' [-Wunused-variable]
354 | auto pi =
| ^~
./stanExports_gqs_ppmc_probs.h:351:12: warning: unused variable 'log_Vc' [-Wunused-variable]
351 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc_probs.h:795:12: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob_impl<false, true, Eigen::Matrix<stan::math::var_value<double>, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
795 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:109:50: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob<false, true, stan::math::var_value<double>>' requested here
109 | return static_cast<const M*>(this)->template log_prob<false, true>(theta,
| ^
./stanExports_gqs_ppmc_probs.h:114:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs>::log_prob_jacobian' requested here
114 | ~model_gqs_ppmc_probs() {}
| ^
./stanExports_gqs_ppmc_probs.h:354:12: warning: unused variable 'pi' [-Wunused-variable]
354 | auto pi =
| ^~
./stanExports_gqs_ppmc_probs.h:315:12: warning: unused variable 'log_Vc' [-Wunused-variable]
315 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc_probs.h:795:12: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob_impl<true, false, Eigen::Matrix<double, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
795 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:115:50: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob<true, false, double>' requested here
115 | return static_cast<const M*>(this)->template log_prob<true, false>(theta,
| ^
./stanExports_gqs_ppmc_probs.h:114:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs>::log_prob_propto' requested here
114 | ~model_gqs_ppmc_probs() {}
| ^
./stanExports_gqs_ppmc_probs.h:318:12: warning: unused variable 'pi' [-Wunused-variable]
318 | auto pi =
| ^~
./stanExports_gqs_ppmc_probs.h:351:12: warning: unused variable 'log_Vc' [-Wunused-variable]
351 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc_probs.h:795:12: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob_impl<true, false, Eigen::Matrix<stan::math::var_value<double>, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
795 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:120:50: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob<true, false, stan::math::var_value<double>>' requested here
120 | return static_cast<const M*>(this)->template log_prob<true, false>(theta,
| ^
./stanExports_gqs_ppmc_probs.h:114:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs>::log_prob_propto' requested here
114 | ~model_gqs_ppmc_probs() {}
| ^
./stanExports_gqs_ppmc_probs.h:354:12: warning: unused variable 'pi' [-Wunused-variable]
354 | auto pi =
| ^~
./stanExports_gqs_ppmc_probs.h:315:12: warning: unused variable 'log_Vc' [-Wunused-variable]
315 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc_probs.h:795:12: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob_impl<true, true, Eigen::Matrix<double, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
795 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:126:50: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob<true, true, double>' requested here
126 | return static_cast<const M*>(this)->template log_prob<true, true>(theta,
| ^
./stanExports_gqs_ppmc_probs.h:114:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs>::log_prob_propto_jacobian' requested here
114 | ~model_gqs_ppmc_probs() {}
| ^
./stanExports_gqs_ppmc_probs.h:318:12: warning: unused variable 'pi' [-Wunused-variable]
318 | auto pi =
| ^~
./stanExports_gqs_ppmc_probs.h:351:12: warning: unused variable 'log_Vc' [-Wunused-variable]
351 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc_probs.h:800:12: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob_impl<false, false, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
800 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:162:50: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob<false, false, stan::math::var_value<double>>' requested here
162 | return static_cast<const M*>(this)->template log_prob<false, false>(
| ^
./stanExports_gqs_ppmc_probs.h:114:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs>::log_prob' requested here
114 | ~model_gqs_ppmc_probs() {}
| ^
./stanExports_gqs_ppmc_probs.h:354:12: warning: unused variable 'pi' [-Wunused-variable]
354 | auto pi =
| ^~
./stanExports_gqs_ppmc_probs.h:351:12: warning: unused variable 'log_Vc' [-Wunused-variable]
351 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc_probs.h:800:12: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob_impl<false, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
800 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:175:50: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob<false, true, stan::math::var_value<double>>' requested here
175 | return static_cast<const M*>(this)->template log_prob<false, true>(
| ^
./stanExports_gqs_ppmc_probs.h:114:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs>::log_prob_jacobian' requested here
114 | ~model_gqs_ppmc_probs() {}
| ^
./stanExports_gqs_ppmc_probs.h:354:12: warning: unused variable 'pi' [-Wunused-variable]
354 | auto pi =
| ^~
./stanExports_gqs_ppmc_probs.h:315:12: warning: unused variable 'log_Vc' [-Wunused-variable]
315 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc_probs.h:800:12: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob_impl<true, false, std::vector<double>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
800 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:182:50: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob<true, false, double>' requested here
182 | return static_cast<const M*>(this)->template log_prob<true, false>(
| ^
./stanExports_gqs_ppmc_probs.h:114:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs>::log_prob_propto' requested here
114 | ~model_gqs_ppmc_probs() {}
| ^
./stanExports_gqs_ppmc_probs.h:318:12: warning: unused variable 'pi' [-Wunused-variable]
318 | auto pi =
| ^~
./stanExports_gqs_ppmc_probs.h:315:12: warning: unused variable 'log_Vc' [-Wunused-variable]
315 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_ppmc_probs.h:800:12: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob_impl<true, true, std::vector<double>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
800 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:195:50: note: in instantiation of function template specialization 'model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs::log_prob<true, true, double>' requested here
195 | return static_cast<const M*>(this)->template log_prob<true, true>(
| ^
./stanExports_gqs_ppmc_probs.h:114:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_ppmc_probs_namespace::model_gqs_ppmc_probs>::log_prob_propto_jacobian' requested here
114 | ~model_gqs_ppmc_probs() {}
| ^
./stanExports_gqs_ppmc_probs.h:318:12: warning: unused variable 'pi' [-Wunused-variable]
318 | auto pi =
| ^~
60 warnings generated.
/usr/local/clang23/bin/clang++ -std=gnu++17 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I"../inst/include" -I"/data/localhost/ripley/R/test-clang/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/data/localhost/ripley/R/test-clang/BH/include' -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppEigen/include' -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -I'/data/localhost/ripley/R/test-clang/rstan/include' -I'/data/localhost/ripley/R/test-clang/StanHeaders/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/data/localhost/ripley/R/test-clang/RcppParallel/include -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c stanExports_gqs_probs.cc -o stanExports_gqs_probs.o
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:21:
/data/localhost/ripley/R/test-clang/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
47 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/usr/local/clang23/bin/../include/c++/v1/streambuf:381:22: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
381 | virtual streamsize xsputn(const char_type* __s, streamsize __n) {
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:21:
/data/localhost/ripley/R/test-clang/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
70 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/usr/local/clang23/bin/../include/c++/v1/streambuf:381:22: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
381 | virtual streamsize xsputn(const char_type* __s, streamsize __n) {
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:11:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/constraint.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/abs.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__exclude_from_explicit_instantiation__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
29 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:21:69: note: expanded from here
21 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
61 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:23:8: note: expanded from here
23 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:11:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/constraint.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/abs.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__visibility__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
29 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:21:110: note: expanded from here
21 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
61 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:23:8: note: expanded from here
23 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:11:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/constraint.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/abs.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__abi_tag__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
29 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:21:136: note: expanded from here
21 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
61 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:23:8: note: expanded from here
23 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:34:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:131:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:39:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/linear_algebra.hpp:20:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:40:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/unscale.hpp:28:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:21:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:18:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/prob.hpp:290:
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/prob/student_t_qf.hpp:74:32: warning: unused variable 'function' [-Wunused-variable]
74 | static constexpr const char* function = "student_t_qf";
| ^~~~~~~~
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:49:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:16:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/prob.hpp:7:
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:52:20: warning: unused variable 'p_val_flip' [-Wunused-variable]
52 | const double p_val_flip = p_val < 0.5 ? p_val : 1.0 - p_val;
| ^~~~~~~~~~
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:42:18: warning: unused variable 'sqrt_inv_ibeta_m1' [-Wunused-variable]
42 | const double sqrt_inv_ibeta_m1 = sqrt(inv(ibeta_arg) - 1.0);
| ^~~~~~~~~~~~~~~~~
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:50:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/experimental/advi/fullrank.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/variational/advi.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer.hpp:57:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer/details.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/move.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/iterator.hpp:27:
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:63:1: warning: unused attribute '__exclude_from_explicit_instantiation__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
63 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:9:69: note: expanded from here
9 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:81:1: note: '#pragma clang attribute push' regions ends here
81 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:11:8: note: expanded from here
11 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:50:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/experimental/advi/fullrank.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/variational/advi.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer.hpp:57:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer/details.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/move.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/iterator.hpp:27:
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:63:1: warning: unused attribute '__visibility__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
63 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:9:110: note: expanded from here
9 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:81:1: note: '#pragma clang attribute push' regions ends here
81 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:11:8: note: expanded from here
11 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:50:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/experimental/advi/fullrank.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/variational/advi.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer.hpp:57:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer/details.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/move.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/iterator.hpp:27:
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:63:1: warning: unused attribute '__abi_tag__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
63 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:9:136: note: expanded from here
9 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:81:1: note: '#pragma clang attribute push' regions ends here
81 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:11:8: note: expanded from here
11 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:54:
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/optimize/newton.hpp:98:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
98 | int ret = 0;
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
1252 | int ret = stan::services::error_codes::CONFIG;
| ^
In file included from stanExports_gqs_probs.cc:5:
In file included from ./stanExports_gqs_probs.h:25:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_header.hpp:13:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/indexing.hpp:13:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:7:
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:520:22: warning: unused variable 'rows' [-Wunused-variable]
520 | const Eigen::Index rows = row_idx.ns_.size();
| ^~~~
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:521:22: warning: unused variable 'cols' [-Wunused-variable]
521 | const Eigen::Index cols = col_idx.ns_.size();
| ^~~~
In file included from stanExports_gqs_probs.cc:5:
./stanExports_gqs_probs.h:298:12: warning: unused variable 'log_Vc' [-Wunused-variable]
298 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_probs.h:720:12: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob_impl<false, true, std::vector<double>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
720 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/util/initialize.hpp:130:33: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob<false, true, double>' requested here
130 | log_prob = model.template log_prob<false, Jacobian>(unconstrained,
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_gqs_probs_namespace::model_gqs_probs, stan::io::var_context, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
49 | std::vector<double> cont_vector = util::initialize(
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_gqs_probs_namespace::model_gqs_probs>' requested here
481 | return_code = stan::services::diagnose::diagnose(model,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_probs_namespace::model_gqs_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_probs.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_probs_namespace::model_gqs_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_probs.cc:5:
./stanExports_gqs_probs.h:301:12: warning: unused variable 'pi' [-Wunused-variable]
301 | auto pi =
| ^~
./stanExports_gqs_probs.h:334:12: warning: unused variable 'log_Vc' [-Wunused-variable]
334 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_probs.h:720:12: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
720 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob<true, true, stan::math::var_value<double>>' requested here
40 | var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/util/initialize.hpp:169:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_gqs_probs_namespace::model_gqs_probs>' requested here
169 | log_prob = stan::model::log_prob_grad<true, Jacobian>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_gqs_probs_namespace::model_gqs_probs, stan::io::var_context, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
49 | std::vector<double> cont_vector = util::initialize(
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_gqs_probs_namespace::model_gqs_probs>' requested here
481 | return_code = stan::services::diagnose::diagnose(model,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_probs_namespace::model_gqs_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_probs.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_probs_namespace::model_gqs_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_probs.cc:5:
./stanExports_gqs_probs.h:337:12: warning: unused variable 'pi' [-Wunused-variable]
337 | auto pi =
| ^~
./stanExports_gqs_probs.h:334:12: warning: unused variable 'log_Vc' [-Wunused-variable]
334 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_probs.h:720:12: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob_impl<true, false, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
720 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob<true, false, stan::math::var_value<double>>' requested here
40 | var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/util/initialize.hpp:169:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, false, model_gqs_probs_namespace::model_gqs_probs>' requested here
169 | log_prob = stan::model::log_prob_grad<true, Jacobian>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/optimize/newton.hpp:54:25: note: in instantiation of function template specialization 'stan::services::util::initialize<false, model_gqs_probs_namespace::model_gqs_probs, stan::io::var_context, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
54 | cont_vector = util::initialize<false>(model, init, rng, init_radius, false,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:502:35: note: in instantiation of function template specialization 'stan::services::optimize::newton<model_gqs_probs_namespace::model_gqs_probs, false>' requested here
502 | = stan::services::optimize::newton(model, *init_context_ptr,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_probs_namespace::model_gqs_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_probs.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_probs_namespace::model_gqs_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_probs.cc:5:
./stanExports_gqs_probs.h:337:12: warning: unused variable 'pi' [-Wunused-variable]
337 | auto pi =
| ^~
./stanExports_gqs_probs.h:298:12: warning: unused variable 'log_Vc' [-Wunused-variable]
298 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_probs.h:720:12: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob_impl<false, false, std::vector<double>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
720 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/optimize/newton.hpp:63:25: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob<false, false, double>' requested here
63 | lp = model.template log_prob<false, jacobian>(cont_vector, disc_vector,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:502:35: note: in instantiation of function template specialization 'stan::services::optimize::newton<model_gqs_probs_namespace::model_gqs_probs, false>' requested here
502 | = stan::services::optimize::newton(model, *init_context_ptr,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_probs_namespace::model_gqs_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_probs.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_probs_namespace::model_gqs_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_probs.cc:5:
./stanExports_gqs_probs.h:301:12: warning: unused variable 'pi' [-Wunused-variable]
301 | auto pi =
| ^~
./stanExports_gqs_probs.h:334:12: warning: unused variable 'log_Vc' [-Wunused-variable]
334 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_probs.h:715:12: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob_impl<true, true, Eigen::Matrix<stan::math::var_value<double>, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
715 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_functional.hpp:21:27: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob<true, true, stan::math::var_value<double>>' requested here
21 | return model.template log_prob<true, true, T>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/functor/gradient.hpp:53:16: note: in instantiation of function template specialization 'stan::model::model_functional<model_gqs_probs_namespace::model_gqs_probs>::operator()<stan::math::var_value<double>>' requested here
53 | var fx_var = f(x_var);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/gradient.hpp:27:17: note: in instantiation of function template specialization 'stan::math::gradient<stan::model::model_functional<model_gqs_probs_namespace::model_gqs_probs>>' requested here
27 | stan::math::gradient(model_functional<M>(model, &ss), x, f, grad_f);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/base_hamiltonian.hpp:63:20: note: in instantiation of function template specialization 'stan::model::gradient<model_gqs_probs_namespace::model_gqs_probs>' requested here
63 | stan::model::gradient(model_, z.q, z.V, z.g, logger);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/mcmc/hmc/integrators/expl_leapfrog.hpp:25:17: note: (skipping 5 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all)
25 | hamiltonian.update_potential_gradient(z, logger);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e.hpp:76:48: note: in instantiation of member function 'stan::mcmc::dense_e_nuts<model_gqs_probs_namespace::model_gqs_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::dense_e_nuts' requested here
76 | stan::mcmc::dense_e_nuts<Model, stan::rng_t> sampler(model, rng);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/sample/hmc_nuts_dense_e.hpp:133:10: note: in instantiation of function template specialization 'stan::services::sample::hmc_nuts_dense_e<model_gqs_probs_namespace::model_gqs_probs>' requested here
133 | return hmc_nuts_dense_e(model, init, default_metric, random_seed, chain,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:621:13: note: in instantiation of function template specialization 'stan::services::sample::hmc_nuts_dense_e<model_gqs_probs_namespace::model_gqs_probs>' requested here
621 | ::hmc_nuts_dense_e(model, *init_context_ptr,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_probs_namespace::model_gqs_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_probs.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_probs_namespace::model_gqs_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_probs.cc:5:
./stanExports_gqs_probs.h:337:12: warning: unused variable 'pi' [-Wunused-variable]
337 | auto pi =
| ^~
./stanExports_gqs_probs.h:298:12: warning: unused variable 'log_Vc' [-Wunused-variable]
298 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_probs.h:715:12: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob_impl<false, true, Eigen::Matrix<double, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
715 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/variational/advi.hpp:512:31: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob<false, true, double>' requested here
512 | log_p = model_.template log_prob<false, true>(cont_params_, &msg2);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/experimental/advi/fullrank.hpp:90:14: note: in instantiation of member function 'stan::variational::advi<model_gqs_probs_namespace::model_gqs_probs, stan::variational::normal_fullrank, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::run' requested here
90 | cmd_advi.run(eta, adapt_engaged, adapt_iterations, tol_rel_obj,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:890:9: note: in instantiation of function template specialization 'stan::services::experimental::advi::fullrank<model_gqs_probs_namespace::model_gqs_probs>' requested here
890 | ::fullrank(model, *init_context_ptr,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_gqs_probs_namespace::model_gqs_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_gqs_probs.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_gqs_probs_namespace::model_gqs_probs, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_gqs_probs.cc:5:
./stanExports_gqs_probs.h:301:12: warning: unused variable 'pi' [-Wunused-variable]
301 | auto pi =
| ^~
./stanExports_gqs_probs.h:298:12: warning: unused variable 'log_Vc' [-Wunused-variable]
298 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_probs.h:715:12: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob_impl<false, false, Eigen::Matrix<double, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
715 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:93:50: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob<false, false, double>' requested here
93 | return static_cast<const M*>(this)->template log_prob<false, false, double>(
| ^
./stanExports_gqs_probs.h:101:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_probs_namespace::model_gqs_probs>::log_prob' requested here
101 | ~model_gqs_probs() {}
| ^
./stanExports_gqs_probs.h:301:12: warning: unused variable 'pi' [-Wunused-variable]
301 | auto pi =
| ^~
./stanExports_gqs_probs.h:334:12: warning: unused variable 'log_Vc' [-Wunused-variable]
334 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_probs.h:715:12: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob_impl<false, false, Eigen::Matrix<stan::math::var_value<double>, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
715 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:98:50: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob<false, false, stan::math::var_value<double>>' requested here
98 | return static_cast<const M*>(this)->template log_prob<false, false>(theta,
| ^
./stanExports_gqs_probs.h:101:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_probs_namespace::model_gqs_probs>::log_prob' requested here
101 | ~model_gqs_probs() {}
| ^
./stanExports_gqs_probs.h:337:12: warning: unused variable 'pi' [-Wunused-variable]
337 | auto pi =
| ^~
./stanExports_gqs_probs.h:334:12: warning: unused variable 'log_Vc' [-Wunused-variable]
334 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_probs.h:715:12: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob_impl<false, true, Eigen::Matrix<stan::math::var_value<double>, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
715 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:109:50: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob<false, true, stan::math::var_value<double>>' requested here
109 | return static_cast<const M*>(this)->template log_prob<false, true>(theta,
| ^
./stanExports_gqs_probs.h:101:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_probs_namespace::model_gqs_probs>::log_prob_jacobian' requested here
101 | ~model_gqs_probs() {}
| ^
./stanExports_gqs_probs.h:337:12: warning: unused variable 'pi' [-Wunused-variable]
337 | auto pi =
| ^~
./stanExports_gqs_probs.h:298:12: warning: unused variable 'log_Vc' [-Wunused-variable]
298 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_probs.h:715:12: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob_impl<true, false, Eigen::Matrix<double, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
715 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:115:50: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob<true, false, double>' requested here
115 | return static_cast<const M*>(this)->template log_prob<true, false>(theta,
| ^
./stanExports_gqs_probs.h:101:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_probs_namespace::model_gqs_probs>::log_prob_propto' requested here
101 | ~model_gqs_probs() {}
| ^
./stanExports_gqs_probs.h:301:12: warning: unused variable 'pi' [-Wunused-variable]
301 | auto pi =
| ^~
./stanExports_gqs_probs.h:334:12: warning: unused variable 'log_Vc' [-Wunused-variable]
334 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_probs.h:715:12: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob_impl<true, false, Eigen::Matrix<stan::math::var_value<double>, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
715 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:120:50: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob<true, false, stan::math::var_value<double>>' requested here
120 | return static_cast<const M*>(this)->template log_prob<true, false>(theta,
| ^
./stanExports_gqs_probs.h:101:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_probs_namespace::model_gqs_probs>::log_prob_propto' requested here
101 | ~model_gqs_probs() {}
| ^
./stanExports_gqs_probs.h:337:12: warning: unused variable 'pi' [-Wunused-variable]
337 | auto pi =
| ^~
./stanExports_gqs_probs.h:298:12: warning: unused variable 'log_Vc' [-Wunused-variable]
298 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_probs.h:715:12: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob_impl<true, true, Eigen::Matrix<double, -1, 1>, Eigen::Matrix<int, -1, 1>, nullptr, nullptr, nullptr>' requested here
715 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:126:50: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob<true, true, double>' requested here
126 | return static_cast<const M*>(this)->template log_prob<true, true>(theta,
| ^
./stanExports_gqs_probs.h:101:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_probs_namespace::model_gqs_probs>::log_prob_propto_jacobian' requested here
101 | ~model_gqs_probs() {}
| ^
./stanExports_gqs_probs.h:301:12: warning: unused variable 'pi' [-Wunused-variable]
301 | auto pi =
| ^~
./stanExports_gqs_probs.h:334:12: warning: unused variable 'log_Vc' [-Wunused-variable]
334 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_probs.h:720:12: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob_impl<false, false, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
720 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:162:50: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob<false, false, stan::math::var_value<double>>' requested here
162 | return static_cast<const M*>(this)->template log_prob<false, false>(
| ^
./stanExports_gqs_probs.h:101:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_probs_namespace::model_gqs_probs>::log_prob' requested here
101 | ~model_gqs_probs() {}
| ^
./stanExports_gqs_probs.h:337:12: warning: unused variable 'pi' [-Wunused-variable]
337 | auto pi =
| ^~
./stanExports_gqs_probs.h:334:12: warning: unused variable 'log_Vc' [-Wunused-variable]
334 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_probs.h:720:12: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob_impl<false, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
720 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:175:50: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob<false, true, stan::math::var_value<double>>' requested here
175 | return static_cast<const M*>(this)->template log_prob<false, true>(
| ^
./stanExports_gqs_probs.h:101:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_probs_namespace::model_gqs_probs>::log_prob_jacobian' requested here
101 | ~model_gqs_probs() {}
| ^
./stanExports_gqs_probs.h:337:12: warning: unused variable 'pi' [-Wunused-variable]
337 | auto pi =
| ^~
./stanExports_gqs_probs.h:298:12: warning: unused variable 'log_Vc' [-Wunused-variable]
298 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_probs.h:720:12: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob_impl<true, false, std::vector<double>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
720 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:182:50: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob<true, false, double>' requested here
182 | return static_cast<const M*>(this)->template log_prob<true, false>(
| ^
./stanExports_gqs_probs.h:101:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_probs_namespace::model_gqs_probs>::log_prob_propto' requested here
101 | ~model_gqs_probs() {}
| ^
./stanExports_gqs_probs.h:301:12: warning: unused variable 'pi' [-Wunused-variable]
301 | auto pi =
| ^~
./stanExports_gqs_probs.h:298:12: warning: unused variable 'log_Vc' [-Wunused-variable]
298 | auto log_Vc =
| ^~~~~~
./stanExports_gqs_probs.h:720:12: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob_impl<true, true, std::vector<double>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
720 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_base_crtp.hpp:195:50: note: in instantiation of function template specialization 'model_gqs_probs_namespace::model_gqs_probs::log_prob<true, true, double>' requested here
195 | return static_cast<const M*>(this)->template log_prob<true, true>(
| ^
./stanExports_gqs_probs.h:101:3: note: in instantiation of member function 'stan::model::model_base_crtp<model_gqs_probs_namespace::model_gqs_probs>::log_prob_propto_jacobian' requested here
101 | ~model_gqs_probs() {}
| ^
./stanExports_gqs_probs.h:301:12: warning: unused variable 'pi' [-Wunused-variable]
301 | auto pi =
| ^~
60 warnings generated.
/usr/local/clang23/bin/clang++ -std=gnu++17 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I"../inst/include" -I"/data/localhost/ripley/R/test-clang/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/data/localhost/ripley/R/test-clang/BH/include' -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppEigen/include' -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -I'/data/localhost/ripley/R/test-clang/rstan/include' -I'/data/localhost/ripley/R/test-clang/StanHeaders/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/data/localhost/ripley/R/test-clang/RcppParallel/include -I'/data/localhost/ripley/R/test-clang/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -D_LIBCPP_KEEP_TRANSITIVE_INCLUDES_LLVM23 -c stanExports_test_dina.cc -o stanExports_test_dina.o
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:3:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:21:
/data/localhost/ripley/R/test-clang/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
47 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/usr/local/clang23/bin/../include/c++/v1/streambuf:381:22: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
381 | virtual streamsize xsputn(const char_type* __s, streamsize __n) {
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:21:
/data/localhost/ripley/R/test-clang/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual]
70 | virtual std::streamsize xsputn(const char_type* s, int n) {
| ^
/usr/local/clang23/bin/../include/c++/v1/streambuf:381:22: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int')
381 | virtual streamsize xsputn(const char_type* __s, streamsize __n) {
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:37:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:11:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/constraint.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/abs.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__exclude_from_explicit_instantiation__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
29 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:21:69: note: expanded from here
21 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
61 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:23:8: note: expanded from here
23 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:11:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/constraint.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/abs.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__visibility__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
29 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:21:110: note: expanded from here
21 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
61 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:23:8: note: expanded from here
23 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:11:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/constraint.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/fun/abs.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast.hpp:33:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/try_lexical_convert.hpp:31:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:47:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/container/container_fwd.hpp:65:
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:29:1: warning: unused attribute '__abi_tag__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
29 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:21:136: note: expanded from here
21 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/container/detail/std_fwd.hpp:61:1: note: '#pragma clang attribute push' regions ends here
61 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:23:8: note: expanded from here
23 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:34:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/dimension.hpp:21:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/dimension_list.hpp:131:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:39:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/linear_algebra.hpp:20:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:40:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/unscale.hpp:28:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:20:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:29:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/conversion.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/units/detail/conversion_impl.hpp:21:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor.hpp:17:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint.hpp:25:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/data/localhost/ripley/R/test-clang/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
28 | <boost/typeof/incr_registration_group.hpp>
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:43:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/dump.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim.hpp:18:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/prob.hpp:290:
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/prob/student_t_qf.hpp:74:32: warning: unused variable 'function' [-Wunused-variable]
74 | static constexpr const char* function = "student_t_qf";
| ^~~~~~~~
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:49:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:16:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/prob.hpp:7:
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:52:20: warning: unused variable 'p_val_flip' [-Wunused-variable]
52 | const double p_val_flip = p_val < 0.5 ? p_val : 1.0 - p_val;
| ^~~~~~~~~~
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:42:18: warning: unused variable 'sqrt_inv_ibeta_m1' [-Wunused-variable]
42 | const double sqrt_inv_ibeta_m1 = sqrt(inv(ibeta_arg) - 1.0);
| ^~~~~~~~~~~~~~~~~
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:50:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/experimental/advi/fullrank.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/variational/advi.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer.hpp:57:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer/details.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/move.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/iterator.hpp:27:
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:63:1: warning: unused attribute '__exclude_from_explicit_instantiation__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
63 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:9:69: note: expanded from here
9 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:81:1: note: '#pragma clang attribute push' regions ends here
81 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:11:8: note: expanded from here
11 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:50:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/experimental/advi/fullrank.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/variational/advi.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer.hpp:57:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer/details.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/move.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/iterator.hpp:27:
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:63:1: warning: unused attribute '__visibility__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
63 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:9:110: note: expanded from here
9 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:81:1: note: '#pragma clang attribute push' regions ends here
81 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:11:8: note: expanded from here
11 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:50:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/experimental/advi/fullrank.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/variational/advi.hpp:12:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer.hpp:57:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/circular_buffer/details.hpp:22:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/move.hpp:30:
In file included from /data/localhost/ripley/R/test-clang/BH/include/boost/move/iterator.hpp:27:
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:63:1: warning: unused attribute '__abi_tag__' in '#pragma clang attribute push' region [-Wpragma-clang-attribute]
63 | BOOST_MOVE_STD_NS_BEG
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:21:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
21 | #define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:74:39: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
74 | # define _LIBCPP_BEGIN_NAMESPACE_STD _LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD inline namespace _LIBCPP_ABI_NAMESPACE {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:70:40: note: expanded from macro '_LIBCPP_BEGIN_UNVERSIONED_NAMESPACE_STD'
70 | _LIBCPP_PUSH_EXTENSION_DIAGNOSTICS _LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS namespace _LIBCPP_NAMESPACE_VISIBILITY std {
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:51:3: note: expanded from macro '_LIBCPP_END_EXPLICIT_ABI_ANNOTATIONS'
51 | _Pragma(_LIBCPP_TOSTRING(clang attribute _LibcxxExplicitABIAnnotations.push( \
| ^
<scratch space>:9:136: note: expanded from here
9 | clang attribute _LibcxxExplicitABIAnnotations.push( __attribute__((__exclude_from_explicit_instantiation__, __visibility__("hidden"), __abi_tag__("nqe230101"))), apply_to = function)
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/iterator_traits.hpp:81:1: note: '#pragma clang attribute push' regions ends here
81 | BOOST_MOVE_STD_NS_END
| ^
/data/localhost/ripley/R/test-clang/BH/include/boost/move/detail/std_ns_begin.hpp:22:34: note: expanded from macro 'BOOST_MOVE_STD_NS_END'
22 | #define BOOST_MOVE_STD_NS_END _LIBCPP_END_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:75:39: note: expanded from macro '_LIBCPP_END_NAMESPACE_STD'
75 | # define _LIBCPP_END_NAMESPACE_STD } _LIBCPP_END_UNVERSIONED_NAMESPACE_STD
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:72:51: note: expanded from macro '_LIBCPP_END_UNVERSIONED_NAMESPACE_STD'
72 | # define _LIBCPP_END_UNVERSIONED_NAMESPACE_STD } _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _LIBCPP_POP_EXTENSION_DIAGNOSTICS
| ^
/usr/local/clang23/bin/../include/c++/v1/__configuration/namespace.h:57:48: note: expanded from macro '_LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS'
57 | #define _LIBCPP_BEGIN_EXPLICIT_ABI_ANNOTATIONS _Pragma("clang attribute _LibcxxExplicitABIAnnotations.pop")
| ^
<scratch space>:11:8: note: expanded from here
11 | clang attribute _LibcxxExplicitABIAnnotations.pop
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:54:
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/optimize/newton.hpp:98:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
98 | int ret = 0;
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
1252 | int ret = stan::services::error_codes::CONFIG;
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:25:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/model_header.hpp:13:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/indexing.hpp:13:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:7:
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:520:22: warning: unused variable 'rows' [-Wunused-variable]
520 | const Eigen::Index rows = row_idx.ns_.size();
| ^~~~
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:521:22: warning: unused variable 'cols' [-Wunused-variable]
521 | const Eigen::Index cols = col_idx.ns_.size();
| ^~~~
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:49:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:11:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/constraint.hpp:14:
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:53:34: warning: lambda capture 'ub' is not used [-Wunused-lambda-capture]
53 | [x, ub, lb, diff, inv_logit_x](auto& vi) mutable {
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/constraint/lub_constrain.hpp:267:37: note: in instantiation of function template specialization 'stan::math::lub_constrain<stan::math::var_value<double>, int, int, nullptr, nullptr>' requested here
267 | std::vector<plain_type_t<decltype(lub_constrain(x[0], lb, ub))>> ret(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/constraint/lub_constrain.hpp:403:12: note: in instantiation of function template specialization 'stan::math::lub_constrain<stan::math::var_value<double>, int, int, stan::math::var_value<double>, nullptr, nullptr>' requested here
403 | return lub_constrain(std::forward<T>(x), std::forward<L>(lb),
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/deserializer.hpp:434:24: note: in instantiation of function template specialization 'stan::math::lub_constrain<true, std::vector<stan::math::var_value<double>>, const int &, const int &, stan::math::var_value<double>, nullptr>' requested here
434 | return stan::math::lub_constrain<Jacobian>(this->read<Ret>(sizes...), lb,
| ^
./stanExports_test_dina.h:650:23: note: in instantiation of function template specialization 'stan::io::deserializer<stan::math::var_value<double>>::read_constrain_lub<std::vector<stan::math::var_value<double>>, true, int, int, stan::math::var_value<double>, int>' requested here
650 | in__.template read_constrain_lub<std::vector<local_scalar_t__>,
| ^
./stanExports_test_dina.h:1267:12: note: in instantiation of function template specialization 'model_test_dina_namespace::model_test_dina::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
1267 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: (skipping 1 context in backtrace; use -ftemplate-backtrace-limit=0 to see all)
40 | var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/util/initialize.hpp:169:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_test_dina_namespace::model_test_dina>' requested here
169 | log_prob = stan::model::log_prob_grad<true, Jacobian>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_test_dina_namespace::model_test_dina, stan::io::var_context, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
49 | std::vector<double> cont_vector = util::initialize(
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_test_dina_namespace::model_test_dina>' requested here
481 | return_code = stan::services::diagnose::diagnose(model,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_test_dina_namespace::model_test_dina, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_test_dina.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_test_dina_namespace::model_test_dina, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:49:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:11:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/constraint.hpp:14:
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:53:38: warning: lambda capture 'lb' is not used [-Wunused-lambda-capture]
53 | [x, ub, lb, diff, inv_logit_x](auto& vi) mutable {
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:125:13: warning: lambda capture 'ub' is not used [-Wunused-lambda-capture]
125 | [x, ub, lb, diff, lp, inv_logit_x](auto& vi) mutable {
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/constraint/lub_constrain.hpp:270:14: note: in instantiation of function template specialization 'stan::math::lub_constrain<stan::math::var_value<double>, int, int, nullptr, nullptr>' requested here
270 | ret[i] = lub_constrain(x[i], lb, ub, lp);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/prim/constraint/lub_constrain.hpp:403:12: note: in instantiation of function template specialization 'stan::math::lub_constrain<stan::math::var_value<double>, int, int, stan::math::var_value<double>, nullptr, nullptr>' requested here
403 | return lub_constrain(std::forward<T>(x), std::forward<L>(lb),
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/io/deserializer.hpp:434:24: note: in instantiation of function template specialization 'stan::math::lub_constrain<true, std::vector<stan::math::var_value<double>>, const int &, const int &, stan::math::var_value<double>, nullptr>' requested here
434 | return stan::math::lub_constrain<Jacobian>(this->read<Ret>(sizes...), lb,
| ^
./stanExports_test_dina.h:650:23: note: in instantiation of function template specialization 'stan::io::deserializer<stan::math::var_value<double>>::read_constrain_lub<std::vector<stan::math::var_value<double>>, true, int, int, stan::math::var_value<double>, int>' requested here
650 | in__.template read_constrain_lub<std::vector<local_scalar_t__>,
| ^
./stanExports_test_dina.h:1267:12: note: in instantiation of function template specialization 'model_test_dina_namespace::model_test_dina::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr, nullptr>' requested here
1267 | return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: (skipping 1 context in backtrace; use -ftemplate-backtrace-limit=0 to see all)
40 | var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/util/initialize.hpp:169:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_test_dina_namespace::model_test_dina>' requested here
169 | log_prob = stan::model::log_prob_grad<true, Jacobian>(
| ^
/data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_test_dina_namespace::model_test_dina, stan::io::var_context, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
49 | std::vector<double> cont_vector = util::initialize(
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_test_dina_namespace::model_test_dina>' requested here
481 | return_code = stan::services::diagnose::diagnose(model,
| ^
/data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_test_dina_namespace::model_test_dina, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
1215 | ret = command(args, model_, holder, names_oi_tidx_,
| ^
stanExports_test_dina.cc:15:73: note: in instantiation of member function 'rstan::stan_fit<model_test_dina_namespace::model_test_dina, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
15 | .method("call_sampler", &rstan::stan_fit<stan_model, stan::rng_t> ::call_sampler)
| ^
In file included from stanExports_test_dina.cc:5:
In file included from ./stanExports_test_dina.h:23:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/rstaninc.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/rstan/include/rstan/stan_fit.hpp:49:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev.hpp:11:
In file included from /data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/constraint.hpp:14:
/data/localhost/ripley/R/test-clang/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:125:17: warning: lambda capture 'lb' is not used [-Wunused-lambda-capture]
125 | [x, ub, lb, diff, lp, inv_logit_x](auto& vi) mutable {
| ^
32 warnings generated.
/usr/local/clang23/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang23/lib -L/usr/local/clang23/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o measr.so RcppExports.o stanExports_gqs_loglik.o stanExports_gqs_ppmc.o stanExports_gqs_ppmc_probs.o stanExports_gqs_probs.o stanExports_test_dina.o -L/data/localhost/ripley/R/test-clang/RcppParallel/lib/ -Wl,-rpath,/data/localhost/ripley/R/test-clang/RcppParallel/lib/ -ltbb -ltbbmalloc
make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-clang/measr/src'
make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-clang/measr/src'
make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-clang/measr/src'
installing to /data/localhost/ripley/R/packages/tests-clang/measr.Rcheck/00LOCK-measr/00new/measr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (measr)