- using R Under development (unstable) (2026-04-21 r89937)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 22.1.4 (https://github.com/llvm/llvm-project 35990504507d79e0b9deb809c8ee5e1b34ceef20)
flang version 22.1.4 (https://github.com/llvm/llvm-project 35990504507d79e0b9deb809c8ee5e1b34ceef20)
- running under: Fedora Linux 42 (Workstation Edition)
- using session charset: UTF-8
* current time: 2026-04-22 11:19:39 UTC
- using option ‘--no-stop-on-test-error’
- checking for file ‘junco/DESCRIPTION’ ... OK
- this is package ‘junco’ version ‘0.1.4’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... INFO
Imports includes 21 non-default packages.
Importing from so many packages makes the package vulnerable to any of
them becoming unavailable. Move as many as possible to Suggests and
use conditionally.
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘junco’ can be installed ... [44s/115s] OK
See the install log for details.
- checking installed package size ... INFO
installed size is 5.4Mb
sub-directories of 1Mb or more:
doc 4.0Mb
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [8s/17s] OK
- checking whether the package can be loaded with stated dependencies ... [8s/19s] OK
- checking whether the package can be unloaded cleanly ... [8s/19s] OK
- checking whether the namespace can be loaded with stated dependencies ... [7s/19s] OK
- checking whether the namespace can be unloaded cleanly ... [8s/22s] OK
- checking loading without being on the library search path ... [8s/18s] OK
- checking whether startup messages can be suppressed ... [8s/22s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [75s/205s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... INFO
Undeclared package ‘huxtable’ in Rd xrefs
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [71s/170s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [7m/19m] ERROR
Running ‘testthat.R’ [7m/19m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> options(rgl.useNULL = TRUE)
> library(testthat)
> library(junco)
Loading required package: formatters
Attaching package: 'formatters'
The following object is masked from 'package:base':
%||%
Loading required package: rtables
Loading required package: magrittr
Attaching package: 'magrittr'
The following objects are masked from 'package:testthat':
equals, is_less_than, not
Attaching package: 'rtables'
The following object is masked from 'package:utils':
str
>
> test_check("junco")
Attaching package: 'dplyr'
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
mmrm() registered as emmeans extension
Saving _problems/test-tt_to_tblfile-206.R
Saving _problems/test-tt_to_tblfile-206.R
Saving _problems/test-tt_to_tblfile-206.R
Saving _problems/test-tt_to_tblfile-223.R
Saving _problems/test-tt_to_tblfile-239.R
Saving _problems/test-tt_to_tblfile-240.R
Saving _problems/test-tt_to_tblfile-280.R
Saving _problems/test-tt_to_tblfile-280.R
Saving _problems/test-tt_to_tblfile-280.R
Saving _problems/test-tt_to_tblfile-280.R
Saving _problems/test-tt_to_tblfile-280.R
Saving _problems/test-tt_to_tblfile-280.R
Saving _problems/test-tt_to_tblfile-432.R
Saving _problems/test-tt_to_tblfile-434.R
Saving _problems/test-tt_to_tblfile-436.R
[ FAIL 15 | WARN 0 | SKIP 116 | PASS 526 ]
══ Skipped tests (116) ═════════════════════════════════════════════════════════
• On CRAN (116): 'test-a_freq_j.R:1:1', 'test-a_freq_j.R:26:1',
'test-a_freq_j.R:54:1', 'test-a_freq_j.R:84:1',
'test-a_summarize_aval_chg_diff.R:6:1',
'test-a_summarize_aval_chg_diff.R:62:1', 'test-ancova.R:4:1',
'test-blank_line.R:1:1', 'test-cmhrms.R:63:1', 'test-cmhrms.R:86:1',
'test-cmp_functions.R:1:1', 'test-cmp_functions.R:8:1',
'test-cmp_functions.R:23:1', 'test-cmp_functions.R:41:1',
'test-colwidths.R:101:1', 'test-count_pct.R:10:1', 'test-count_pct.R:48:1',
'test-count_pct.R:89:1', 'test-count_pct.R:112:1', 'test-count_pct.R:133:1',
'test-count_pct.R:185:1', 'test-count_pct.R:228:1', 'test-count_pct.R:267:1',
'test-count_pct.R:311:1', 'test-count_pct.R:453:1', 'test-coxph_hr.R:5:1',
'test-coxph_hr.R:48:1', 'test-coxph_hr.R:79:1',
'test-coxreg_multivar.R:29:1', 'test-coxreg_multivar.R:37:1',
'test-coxreg_multivar.R:47:1', 'test-coxreg_multivar.R:76:1',
'test-coxreg_multivar.R:94:1', 'test-coxreg_multivar.R:123:1',
'test-docx_exporter_functions.R:8:1', 'test-estimate_proportion_diff.R:1:1',
'test-estimate_proportion_diff.R:36:1', 'test-event_free.R:1:1',
'test-event_free.R:21:1', 'test-event_free.R:42:1', 'test-event_free.R:74:1',
'test-get_ref_info.R:6:1', 'test-get_ref_info.R:77:1',
'test-jjcs_num_formats.R:10:1', 'test-jjcs_num_formats.R:124:1',
'test-jjcs_num_formats.R:219:1', 'test-jjcsformats.R:12:1',
'test-jjcsformats.R:155:1', 'test-jjcsformats.R:167:1',
'test-junco_utils_default_stats_formats_labels.R:12:1',
'test-junco_utils_default_stats_formats_labels.R:18:1',
'test-junco_utils_default_stats_formats_labels.R:26:1',
'test-junco_utils_default_stats_formats_labels.R:32:1',
'test-junco_utils_default_stats_formats_labels.R:41:1',
'test-kaplan_meier.R:3:1', 'test-kaplan_meier.R:20:1',
'test-kaplan_meier.R:44:1', 'test-kaplan_meier.R:63:1',
'test-kaplan_meier.R:87:1', 'test-kaplan_meier.R:117:1',
'test-markup_unicodify.R:1:1', 'test-mmrm.R:3:1', 'test-mmrm.R:42:1',
'test-mmrm_rbmi.R:5:1', 'test-odds_ratio.R:115:1', 'test-odds_ratio.R:154:1',
'test-proportions.R:1:1', 'test-proportions.R:9:1',
'test-proportions.R:18:1', 'test-proportions.R:28:1',
'test-proportions.R:39:1', 'test-proportions.R:47:1',
'test-proportions.R:80:1', 'test-proportions.R:92:1',
'test-proportions.R:105:1', 'test-proportions.R:112:1',
'test-proportions.R:170:1', 'test-rbmi.R:78:3', 'test-rbmi.R:119:3',
'test-rbmi.R:150:3', 'test-rbmi.R:169:3', 'test-resp01_functions.R:3:1',
'test-resp01_functions.R:15:1', 'test-resp01_functions.R:27:1',
'test-resp01_functions.R:70:1', 'test-resp01_functions.R:98:1',
'test-resp01_functions.R:126:1', 'test-resp01_functions.R:155:1',
'test-resp01_functions.R:177:1', 'test-resp01_functions.R:200:1',
'test-resp01_functions.R:224:1', 'test-resp01_functions.R:256:1',
'test-response_by_var.R:18:1', 'test-summarize_ancova.R:126:1',
'test-summarize_ancova.R:145:1', 'test-summarize_mmrm.R:15:1',
'test-summarize_mmrm.R:33:1', 'test-summarize_mmrm.R:70:1',
'test-summarize_mmrm.R:107:1', 'test-summarize_mmrm.R:144:1',
'test-summarize_mmrm.R:177:1', 'test-tabulate_lsmeans.R:1:1',
'test-tabulate_lsmeans.R:49:1', 'test-tabulate_lsmeans_wide.R:3:1',
'test-tabulate_lsmeans_wide.R:121:1', 'test-tabulate_lsmeans_wide.R:194:1',
'test-tabulate_lsmeans_wide.R:281:1', 'test-tabulate_lsmeans_wide.R:310:1',
'test-tabulate_lsmeans_wide.R:355:1', 'test-tabulate_rbmi.R:287:1',
'test-tern_utils_default_stats_formats_labels.R:15:1',
'test-tern_utils_default_stats_formats_labels.R:142:1',
'test-tern_utils_default_stats_formats_labels.R:253:1',
'test-tern_utils_default_stats_formats_labels.R:315:1',
'test-test_proportion_diff.R:1:1', 'test-tt_to_tblfile.R:193:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-tt_to_tblfile.R:206:5'): tt_to_tlgrtf works with wide table ──
Snapshot of `fl` has changed.
── Failure ('test-tt_to_tblfile.R:206:5'): tt_to_tlgrtf works with wide table ──
Snapshot of `fl` has changed.
── Failure ('test-tt_to_tblfile.R:206:5'): tt_to_tlgrtf works with wide table ──
Snapshot of `fl` has changed.
── Failure ('test-tt_to_tblfile.R:223:3'): tt_to_tlgrtf works with argument combined_rtf = TRUE ──
Snapshot of `cmb_fl` has changed.
── Failure ('test-tt_to_tblfile.R:239:3'): tt_to_tlgrtf converts table tree to tlg without error ──
Snapshot of `rtf_out_wrapper(tbl, "test1")` has changed.
── Failure ('test-tt_to_tblfile.R:240:3'): tt_to_tlgrtf converts table tree to tlg without error ──
Snapshot of `rtf_out_wrapper(tbl, "test1b", colwidths = 120)` has changed.
── Failure ('test-tt_to_tblfile.R:280:5'): tt_to_tlgrtf converts table tree to tlg without error ──
Snapshot of `fl` has changed.
── Failure ('test-tt_to_tblfile.R:280:5'): tt_to_tlgrtf converts table tree to tlg without error ──
Snapshot of `fl` has changed.
── Failure ('test-tt_to_tblfile.R:280:5'): tt_to_tlgrtf converts table tree to tlg without error ──
Snapshot of `fl` has changed.
── Failure ('test-tt_to_tblfile.R:280:5'): tt_to_tlgrtf converts table tree to tlg without error ──
Snapshot of `fl` has changed.
── Failure ('test-tt_to_tblfile.R:280:5'): tt_to_tlgrtf converts table tree to tlg without error ──
Snapshot of `fl` has changed.
── Failure ('test-tt_to_tblfile.R:280:5'): tt_to_tlgrtf converts table tree to tlg without error ──
Snapshot of `fl` has changed.
── Failure ('test-tt_to_tblfile.R:432:3'): round_type in tt_to_tlgrtf works as expected for tabletree object ──
Snapshot of `rtf_sas` has changed.
── Failure ('test-tt_to_tblfile.R:434:3'): round_type in tt_to_tlgrtf works as expected for tabletree object ──
Snapshot of `rtf_iec_mod` has changed.
── Failure ('test-tt_to_tblfile.R:436:3'): round_type in tt_to_tlgrtf works as expected for tabletree object ──
Snapshot of `rtf_iec` has changed.
── Snapshots ───────────────────────────────────────────────────────────────────
To review and process snapshots locally:
* Locate check directory.
* Copy 'tests/testthat/_snaps' to local package.
* Run `testthat::snapshot_accept()` to accept all changes.
* Run `testthat::snapshot_review()` to review all changes.
[ FAIL 15 | WARN 0 | SKIP 116 | PASS 526 ]
Error:
! Test failures.
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [6m/16m] OK
- checking PDF version of manual ... [19s/56s] OK
- checking HTML version of manual ... [25s/72s] OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 ERROR