* installing *source* package ‘isqg’ ...
** package ‘isqg’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/isqg/src'
/usr/local/clang-trunk0/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang-trunk/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang-trunk/include    -fpic  -O3 -Wall -pedantic -frtti  -c Genetics.cpp -o Genetics.o
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<bool, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base<bool>' requested here
    BOOST_HASH_SPECIALIZE(bool)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<bool, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:610:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char>' requested here
    BOOST_HASH_SPECIALIZE(char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<signed char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:611:5: note: in instantiation of template class 'boost::hash_detail::hash_base<signed char>' requested here
    BOOST_HASH_SPECIALIZE(signed char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<signed char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned char>' requested here
    BOOST_HASH_SPECIALIZE(unsigned char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<wchar_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:614:5: note: in instantiation of template class 'boost::hash_detail::hash_base<wchar_t>' requested here
    BOOST_HASH_SPECIALIZE(wchar_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<wchar_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char16_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char16_t>' requested here
    BOOST_HASH_SPECIALIZE(char16_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char16_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char32_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char32_t>' requested here
    BOOST_HASH_SPECIALIZE(char32_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char32_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<short, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base<short>' requested here
    BOOST_HASH_SPECIALIZE(short)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<short, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned short, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:623:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned short>' requested here
    BOOST_HASH_SPECIALIZE(unsigned short)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned short, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<int, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base<int>' requested here
    BOOST_HASH_SPECIALIZE(int)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<int, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned int, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned int>' requested here
    BOOST_HASH_SPECIALIZE(unsigned int)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned int, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long>' requested here
    BOOST_HASH_SPECIALIZE(long)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:627:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned long>' requested here
    BOOST_HASH_SPECIALIZE(unsigned long)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<float, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:629:5: note: in instantiation of template class 'boost::hash_detail::hash_base<float>' requested here
    BOOST_HASH_SPECIALIZE(float)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<float, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<double, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base<double>' requested here
    BOOST_HASH_SPECIALIZE(double)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<double, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long double, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:631:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long double>' requested here
    BOOST_HASH_SPECIALIZE(long double)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long double, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::string)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::wstring, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:635:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::wstring>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::wstring)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::wstring, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::u16string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:638:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::u16string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::basic_string<char16_t>)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::u16string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::u32string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:641:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::u32string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::basic_string<char32_t>)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::u32string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long long>' requested here
    BOOST_HASH_SPECIALIZE(boost::long_long_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned long long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned long long>' requested here
    BOOST_HASH_SPECIALIZE(boost::ulong_long_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned long long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:663:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here
    BOOST_HASH_SPECIALIZE(boost::int128_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned __int128, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:664:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned __int128>' requested here
    BOOST_HASH_SPECIALIZE(boost::uint128_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned __int128, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::type_index, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:679:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::type_index>' requested here
    BOOST_HASH_SPECIALIZE(std::type_index)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::type_index, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered_set.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/unordered_set.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/detail/set.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/detail/implementation.hpp:39:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/is_nothrow_move_assignable.hpp:16:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_NOTHROW_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN'
#     define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:68:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_CONSTRUCTOR(T)>{};
                                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR'
#     define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible<T>::value)
                                               ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:69:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_copy_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_COPY(T)>{};
                                                                                        ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY'
#     define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile<T>::value && !is_reference<T>::value && is_copy_constructible<T>::value)
                                        ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:70:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_destructor.hpp:12:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins]
template <typename T> struct has_trivial_destructor : public integral_constant<bool, BOOST_HAS_TRIVIAL_DESTRUCTOR(T)>{};
                                                                                     ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR'
#     define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T)  && is_destructible<T>::value)
                                              ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:79:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_assign.hpp:29:7: warning: builtin __has_trivial_assign is deprecated; use __is_trivially_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_TRIVIAL_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:193:43: note: expanded from macro 'BOOST_HAS_TRIVIAL_ASSIGN'
#     define BOOST_HAS_TRIVIAL_ASSIGN(T) (__has_trivial_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:80:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins]
   : public integral_constant <bool, ((::boost::is_pod<T>::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{};
                                                                    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR'
#     define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T)
                                              ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:81:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins]
   BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX
   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY'
#     define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference<T>::value)
                                        ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:69:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_copy_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_COPY(T)>{};
                                                                                        ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY'
#     define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile<T>::value && !is_reference<T>::value && is_copy_constructible<T>::value)
                                        ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_copy_constructor<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:39:54: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    explicit D(const T& t_) BOOST_NOEXCEPT_IF(boost::has_nothrow_copy_constructor<T>::value) : t(t_) {}          \
                                                     ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:68:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_CONSTRUCTOR(T)>{};
                                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR'
#     define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible<T>::value)
                                               ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:69:68: note: in instantiation of template class 'boost::has_nothrow_constructor<unsigned int>' requested here
template <class T> struct has_nothrow_default_constructor : public has_nothrow_constructor<T>{};
                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_default_constructor<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:40:34: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    D() BOOST_NOEXCEPT_IF(boost::has_nothrow_default_constructor<T>::value) : t() {}                             \
                                 ^
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered_set.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/unordered_set.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/detail/set.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/detail/implementation.hpp:39:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/is_nothrow_move_assignable.hpp:16:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_NOTHROW_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN'
#     define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_assign<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:42:57: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    D& operator=(const D& rhs) BOOST_NOEXCEPT_IF(boost::has_nothrow_assign<T>::value) {t = rhs.t; return *this;} \
                                                        ^
/usr/local/clang-trunk0/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang-trunk/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang-trunk/include    -fpic  -O3 -Wall -pedantic -frtti  -c Mating.cpp -o Mating.o
Genetics.cpp:363:40: warning: operator '?:' has lower precedence than '&'; '&' will be evaluated first [-Wbitwise-conditional-parentheses]
    genotype[it] = cis[it] & trans[it] ? 1 : (cis[it] ^ trans[it] ? 0 : -1) ;
                   ~~~~~~~~~~~~~~~~~~~ ^
Genetics.cpp:363:40: note: place parentheses around the '&' expression to silence this warning
    genotype[it] = cis[it] & trans[it] ? 1 : (cis[it] ^ trans[it] ? 0 : -1) ;
                                       ^
                   (                  )
Genetics.cpp:363:40: note: place parentheses around the '?:' expression to evaluate it first
    genotype[it] = cis[it] & trans[it] ? 1 : (cis[it] ^ trans[it] ? 0 : -1) ;
                                       ^
                             (                                             )
Genetics.cpp:363:20: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    genotype[it] = cis[it] & trans[it] ? 1 : (cis[it] ^ trans[it] ? 0 : -1) ;
                   ^~~~~~~~~~~~~~~~~~~
                           &&
Genetics.cpp:363:20: note: cast one or both operands to int to silence this warning
Genetics.cpp:376:73: warning: operator '?:' has lower precedence than '&'; '&' will be evaluated first [-Wbitwise-conditional-parentheses]
    genotype[it] = cis[it] & trans[it] ? "1 1" : (~cis[it] & ~trans[it] ? "2 2" : (cis[it] & 1 ? "1 2" : "2 1")) ;
                                                  ~~~~~~~~~~~~~~~~~~~~~ ^
Genetics.cpp:376:73: note: place parentheses around the '&' expression to silence this warning
    genotype[it] = cis[it] & trans[it] ? "1 1" : (~cis[it] & ~trans[it] ? "2 2" : (cis[it] & 1 ? "1 2" : "2 1")) ;
                                                                        ^
                                                  (                    )
Genetics.cpp:376:73: note: place parentheses around the '?:' expression to evaluate it first
    genotype[it] = cis[it] & trans[it] ? "1 1" : (~cis[it] & ~trans[it] ? "2 2" : (cis[it] & 1 ? "1 2" : "2 1")) ;
                                                                        ^
                                                             (                                                 )
Genetics.cpp:376:40: warning: operator '?:' has lower precedence than '&'; '&' will be evaluated first [-Wbitwise-conditional-parentheses]
    genotype[it] = cis[it] & trans[it] ? "1 1" : (~cis[it] & ~trans[it] ? "2 2" : (cis[it] & 1 ? "1 2" : "2 1")) ;
                   ~~~~~~~~~~~~~~~~~~~ ^
Genetics.cpp:376:40: note: place parentheses around the '&' expression to silence this warning
    genotype[it] = cis[it] & trans[it] ? "1 1" : (~cis[it] & ~trans[it] ? "2 2" : (cis[it] & 1 ? "1 2" : "2 1")) ;
                                       ^
                   (                  )
Genetics.cpp:376:40: note: place parentheses around the '?:' expression to evaluate it first
    genotype[it] = cis[it] & trans[it] ? "1 1" : (~cis[it] & ~trans[it] ? "2 2" : (cis[it] & 1 ? "1 2" : "2 1")) ;
                                       ^
                             (                                                                                  )
Genetics.cpp:376:20: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    genotype[it] = cis[it] & trans[it] ? "1 1" : (~cis[it] & ~trans[it] ? "2 2" : (cis[it] & 1 ? "1 2" : "2 1")) ;
                   ^~~~~~~~~~~~~~~~~~~
                           &&
Genetics.cpp:376:20: note: cast one or both operands to int to silence this warning
Genetics.cpp:376:51: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    genotype[it] = cis[it] & trans[it] ? "1 1" : (~cis[it] & ~trans[it] ? "2 2" : (cis[it] & 1 ? "1 2" : "2 1")) ;
                                                  ^~~~~~~~~~~~~~~~~~~~~
                                                           &&
Genetics.cpp:376:51: note: cast one or both operands to int to silence this warning
In file included from Genetics.cpp:39:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<const std::error_category *, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:692:18: note: in instantiation of template class 'boost::hash_detail::hash_base<const std::error_category *>' requested here
        : public boost::hash_detail::hash_base<T*>
                 ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:420:24: note: in instantiation of template class 'boost::hash<const std::error_category *>' requested here
        boost::hash<T> hasher;
                       ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:551:9: note: in instantiation of function template specialization 'boost::hash_combine<const std::error_category *>' requested here
        hash_combine(seed, &v.category());
        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<const std::error_category *, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<bool, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base<bool>' requested here
    BOOST_HASH_SPECIALIZE(bool)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<bool, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:610:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char>' requested here
    BOOST_HASH_SPECIALIZE(char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<signed char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:611:5: note: in instantiation of template class 'boost::hash_detail::hash_base<signed char>' requested here
    BOOST_HASH_SPECIALIZE(signed char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<signed char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned char>' requested here
    BOOST_HASH_SPECIALIZE(unsigned char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<wchar_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:614:5: note: in instantiation of template class 'boost::hash_detail::hash_base<wchar_t>' requested here
    BOOST_HASH_SPECIALIZE(wchar_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<wchar_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char16_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char16_t>' requested here
    BOOST_HASH_SPECIALIZE(char16_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char16_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char32_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char32_t>' requested here
    BOOST_HASH_SPECIALIZE(char32_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char32_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<short, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base<short>' requested here
    BOOST_HASH_SPECIALIZE(short)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<short, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned short, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:623:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned short>' requested here
    BOOST_HASH_SPECIALIZE(unsigned short)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned short, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<int, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base<int>' requested here
    BOOST_HASH_SPECIALIZE(int)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<int, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned int, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned int>' requested here
    BOOST_HASH_SPECIALIZE(unsigned int)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned int, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long>' requested here
    BOOST_HASH_SPECIALIZE(long)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:627:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned long>' requested here
    BOOST_HASH_SPECIALIZE(unsigned long)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<float, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:629:5: note: in instantiation of template class 'boost::hash_detail::hash_base<float>' requested here
    BOOST_HASH_SPECIALIZE(float)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<float, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<double, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base<double>' requested here
    BOOST_HASH_SPECIALIZE(double)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<double, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long double, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:631:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long double>' requested here
    BOOST_HASH_SPECIALIZE(long double)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long double, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::string)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::wstring, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:635:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::wstring>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::wstring)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::wstring, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::u16string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:638:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::u16string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::basic_string<char16_t>)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::u16string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::u32string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:641:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::u32string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::basic_string<char32_t>)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::u32string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long long>' requested here
    BOOST_HASH_SPECIALIZE(boost::long_long_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned long long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned long long>' requested here
    BOOST_HASH_SPECIALIZE(boost::ulong_long_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned long long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:663:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here
    BOOST_HASH_SPECIALIZE(boost::int128_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned __int128, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:664:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned __int128>' requested here
    BOOST_HASH_SPECIALIZE(boost::uint128_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned __int128, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::type_index, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:679:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::type_index>' requested here
    BOOST_HASH_SPECIALIZE(std::type_index)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::type_index, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered_set.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/unordered_set.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/detail/set.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/detail/implementation.hpp:39:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/is_nothrow_move_assignable.hpp:16:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_NOTHROW_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN'
#     define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
/usr/local/clang-trunk0/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang-trunk/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang-trunk/include    -fpic  -O3 -Wall -pedantic -frtti  -c RcppExports.cpp -o RcppExports.o
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:68:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_CONSTRUCTOR(T)>{};
                                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR'
#     define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible<T>::value)
                                               ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:69:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_copy_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_COPY(T)>{};
                                                                                        ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY'
#     define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile<T>::value && !is_reference<T>::value && is_copy_constructible<T>::value)
                                        ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:70:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_destructor.hpp:12:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins]
template <typename T> struct has_trivial_destructor : public integral_constant<bool, BOOST_HAS_TRIVIAL_DESTRUCTOR(T)>{};
                                                                                     ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR'
#     define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T)  && is_destructible<T>::value)
                                              ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:79:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_assign.hpp:29:7: warning: builtin __has_trivial_assign is deprecated; use __is_trivially_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_TRIVIAL_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:193:43: note: expanded from macro 'BOOST_HAS_TRIVIAL_ASSIGN'
#     define BOOST_HAS_TRIVIAL_ASSIGN(T) (__has_trivial_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:80:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins]
   : public integral_constant <bool, ((::boost::is_pod<T>::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{};
                                                                    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR'
#     define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T)
                                              ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:81:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins]
   BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX
   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY'
#     define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference<T>::value)
                                        ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:69:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_copy_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_COPY(T)>{};
                                                                                        ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY'
#     define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile<T>::value && !is_reference<T>::value && is_copy_constructible<T>::value)
                                        ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_copy_constructor<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:39:54: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    explicit D(const T& t_) BOOST_NOEXCEPT_IF(boost::has_nothrow_copy_constructor<T>::value) : t(t_) {}          \
                                                     ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:68:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_CONSTRUCTOR(T)>{};
                                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR'
#     define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible<T>::value)
                                               ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:69:68: note: in instantiation of template class 'boost::has_nothrow_constructor<unsigned int>' requested here
template <class T> struct has_nothrow_default_constructor : public has_nothrow_constructor<T>{};
                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_default_constructor<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:40:34: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    D() BOOST_NOEXCEPT_IF(boost::has_nothrow_default_constructor<T>::value) : t() {}                             \
                                 ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered_set.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/unordered_set.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/detail/set.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/detail/implementation.hpp:39:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/is_nothrow_move_assignable.hpp:16:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_NOTHROW_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN'
#     define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_assign<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:42:57: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    D& operator=(const D& rhs) BOOST_NOEXCEPT_IF(boost::has_nothrow_assign<T>::value) {t = rhs.t; return *this;} \
                                                        ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<bool, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base<bool>' requested here
    BOOST_HASH_SPECIALIZE(bool)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<bool, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:610:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char>' requested here
    BOOST_HASH_SPECIALIZE(char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<signed char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:611:5: note: in instantiation of template class 'boost::hash_detail::hash_base<signed char>' requested here
    BOOST_HASH_SPECIALIZE(signed char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<signed char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned char>' requested here
    BOOST_HASH_SPECIALIZE(unsigned char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<wchar_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:614:5: note: in instantiation of template class 'boost::hash_detail::hash_base<wchar_t>' requested here
    BOOST_HASH_SPECIALIZE(wchar_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<wchar_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char16_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char16_t>' requested here
    BOOST_HASH_SPECIALIZE(char16_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char16_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char32_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char32_t>' requested here
    BOOST_HASH_SPECIALIZE(char32_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char32_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<short, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base<short>' requested here
    BOOST_HASH_SPECIALIZE(short)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<short, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned short, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:623:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned short>' requested here
    BOOST_HASH_SPECIALIZE(unsigned short)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned short, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<int, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base<int>' requested here
    BOOST_HASH_SPECIALIZE(int)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<int, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned int, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned int>' requested here
    BOOST_HASH_SPECIALIZE(unsigned int)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned int, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long>' requested here
    BOOST_HASH_SPECIALIZE(long)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:627:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned long>' requested here
    BOOST_HASH_SPECIALIZE(unsigned long)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<float, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:629:5: note: in instantiation of template class 'boost::hash_detail::hash_base<float>' requested here
    BOOST_HASH_SPECIALIZE(float)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<float, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<double, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base<double>' requested here
    BOOST_HASH_SPECIALIZE(double)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<double, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long double, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:631:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long double>' requested here
    BOOST_HASH_SPECIALIZE(long double)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long double, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::string)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::wstring, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:635:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::wstring>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::wstring)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::wstring, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::u16string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:638:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::u16string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::basic_string<char16_t>)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::u16string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::u32string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:641:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::u32string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::basic_string<char32_t>)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::u32string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long long>' requested here
    BOOST_HASH_SPECIALIZE(boost::long_long_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned long long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned long long>' requested here
    BOOST_HASH_SPECIALIZE(boost::ulong_long_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned long long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:663:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here
    BOOST_HASH_SPECIALIZE(boost::int128_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned __int128, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:664:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned __int128>' requested here
    BOOST_HASH_SPECIALIZE(boost::uint128_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned __int128, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::type_index, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:679:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::type_index>' requested here
    BOOST_HASH_SPECIALIZE(std::type_index)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::type_index, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered_set.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/unordered_set.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/detail/set.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/detail/implementation.hpp:39:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/is_nothrow_move_assignable.hpp:16:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_NOTHROW_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN'
#     define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:68:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_CONSTRUCTOR(T)>{};
                                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR'
#     define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible<T>::value)
                                               ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:69:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_copy_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_COPY(T)>{};
                                                                                        ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY'
#     define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile<T>::value && !is_reference<T>::value && is_copy_constructible<T>::value)
                                        ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:70:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_destructor.hpp:12:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins]
template <typename T> struct has_trivial_destructor : public integral_constant<bool, BOOST_HAS_TRIVIAL_DESTRUCTOR(T)>{};
                                                                                     ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR'
#     define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T)  && is_destructible<T>::value)
                                              ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:79:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_assign.hpp:29:7: warning: builtin __has_trivial_assign is deprecated; use __is_trivially_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_TRIVIAL_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:193:43: note: expanded from macro 'BOOST_HAS_TRIVIAL_ASSIGN'
#     define BOOST_HAS_TRIVIAL_ASSIGN(T) (__has_trivial_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:80:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins]
   : public integral_constant <bool, ((::boost::is_pod<T>::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{};
                                                                    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR'
#     define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T)
                                              ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:81:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins]
   BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX
   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY'
#     define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference<T>::value)
                                        ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:69:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_copy_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_COPY(T)>{};
                                                                                        ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY'
#     define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile<T>::value && !is_reference<T>::value && is_copy_constructible<T>::value)
                                        ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_copy_constructor<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:39:54: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    explicit D(const T& t_) BOOST_NOEXCEPT_IF(boost::has_nothrow_copy_constructor<T>::value) : t(t_) {}          \
                                                     ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:68:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_CONSTRUCTOR(T)>{};
                                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR'
#     define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible<T>::value)
                                               ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:69:68: note: in instantiation of template class 'boost::has_nothrow_constructor<unsigned int>' requested here
template <class T> struct has_nothrow_default_constructor : public has_nothrow_constructor<T>{};
                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_default_constructor<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:40:34: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    D() BOOST_NOEXCEPT_IF(boost::has_nothrow_default_constructor<T>::value) : t() {}                             \
                                 ^
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered_set.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/unordered_set.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/detail/set.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/detail/implementation.hpp:39:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/is_nothrow_move_assignable.hpp:16:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_NOTHROW_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN'
#     define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_assign<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:42:57: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    D& operator=(const D& rhs) BOOST_NOEXCEPT_IF(boost::has_nothrow_assign<T>::value) {t = rhs.t; return *this;} \
                                                        ^
42 warnings generated.
/usr/local/clang-trunk0/bin/clang++ -std=gnu++14 -I"/data/gannet/ripley/R/R-clang-trunk/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang-trunk/include    -fpic  -O3 -Wall -pedantic -frtti  -c Trait.cpp -o Trait.o
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<bool, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base<bool>' requested here
    BOOST_HASH_SPECIALIZE(bool)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<bool, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:610:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char>' requested here
    BOOST_HASH_SPECIALIZE(char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<signed char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:611:5: note: in instantiation of template class 'boost::hash_detail::hash_base<signed char>' requested here
    BOOST_HASH_SPECIALIZE(signed char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<signed char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned char, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned char>' requested here
    BOOST_HASH_SPECIALIZE(unsigned char)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned char, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<wchar_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:614:5: note: in instantiation of template class 'boost::hash_detail::hash_base<wchar_t>' requested here
    BOOST_HASH_SPECIALIZE(wchar_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<wchar_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char16_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char16_t>' requested here
    BOOST_HASH_SPECIALIZE(char16_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char16_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<char32_t, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base<char32_t>' requested here
    BOOST_HASH_SPECIALIZE(char32_t)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<char32_t, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<short, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base<short>' requested here
    BOOST_HASH_SPECIALIZE(short)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<short, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned short, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:623:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned short>' requested here
    BOOST_HASH_SPECIALIZE(unsigned short)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned short, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<int, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base<int>' requested here
    BOOST_HASH_SPECIALIZE(int)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<int, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned int, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned int>' requested here
    BOOST_HASH_SPECIALIZE(unsigned int)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned int, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long>' requested here
    BOOST_HASH_SPECIALIZE(long)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:627:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned long>' requested here
    BOOST_HASH_SPECIALIZE(unsigned long)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<float, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:629:5: note: in instantiation of template class 'boost::hash_detail::hash_base<float>' requested here
    BOOST_HASH_SPECIALIZE(float)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<float, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<double, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base<double>' requested here
    BOOST_HASH_SPECIALIZE(double)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<double, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long double, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:631:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long double>' requested here
    BOOST_HASH_SPECIALIZE(long double)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long double, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::string)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::wstring, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:635:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::wstring>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::wstring)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::wstring, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::u16string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:638:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::u16string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::basic_string<char16_t>)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::u16string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::u32string, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:641:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::u32string>' requested here
    BOOST_HASH_SPECIALIZE_REF(std::basic_string<char32_t>)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:591:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::u32string, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<long long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<long long>' requested here
    BOOST_HASH_SPECIALIZE(boost::long_long_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<long long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned long long, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned long long>' requested here
    BOOST_HASH_SPECIALIZE(boost::ulong_long_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned long long, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:663:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here
    BOOST_HASH_SPECIALIZE(boost::int128_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<unsigned __int128, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:664:5: note: in instantiation of template class 'boost::hash_detail::hash_base<unsigned __int128>' requested here
    BOOST_HASH_SPECIALIZE(boost::uint128_type)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<unsigned __int128, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<std::type_index, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:679:5: note: in instantiation of template class 'boost::hash_detail::hash_base<std::type_index>' requested here
    BOOST_HASH_SPECIALIZE(std::type_index)
    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:581:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE'
         : public boost::hash_detail::hash_base<type> \
                  ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<std::type_index, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered_set.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/unordered_set.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/detail/set.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/detail/implementation.hpp:39:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/is_nothrow_move_assignable.hpp:16:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_NOTHROW_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN'
#     define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:68:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_CONSTRUCTOR(T)>{};
                                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR'
#     define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible<T>::value)
                                               ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:69:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_copy_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_COPY(T)>{};
                                                                                        ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY'
#     define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile<T>::value && !is_reference<T>::value && is_copy_constructible<T>::value)
                                        ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:70:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_destructor.hpp:12:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins]
template <typename T> struct has_trivial_destructor : public integral_constant<bool, BOOST_HAS_TRIVIAL_DESTRUCTOR(T)>{};
                                                                                     ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR'
#     define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T)  && is_destructible<T>::value)
                                              ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:79:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_assign.hpp:29:7: warning: builtin __has_trivial_assign is deprecated; use __is_trivially_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_TRIVIAL_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:193:43: note: expanded from macro 'BOOST_HAS_TRIVIAL_ASSIGN'
#     define BOOST_HAS_TRIVIAL_ASSIGN(T) (__has_trivial_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:80:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins]
   : public integral_constant <bool, ((::boost::is_pod<T>::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{};
                                                                    ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR'
#     define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T)
                                              ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:81:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins]
   BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX
   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY'
#     define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference<T>::value)
                                        ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:69:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_copy_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_COPY(T)>{};
                                                                                        ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY'
#     define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile<T>::value && !is_reference<T>::value && is_copy_constructible<T>::value)
                                        ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_copy_constructor<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:39:54: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    explicit D(const T& t_) BOOST_NOEXCEPT_IF(boost::has_nothrow_copy_constructor<T>::value) : t(t_) {}          \
                                                     ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:24:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/graph_traits.hpp:27:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/pending/property.hpp:13:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits.hpp:68:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins]
template <class T> struct has_nothrow_constructor : public integral_constant<bool, BOOST_HAS_NOTHROW_CONSTRUCTOR(T)>{};
                                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR'
#     define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible<T>::value)
                                               ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_constructor.hpp:69:68: note: in instantiation of template class 'boost::has_nothrow_constructor<unsigned int>' requested here
template <class T> struct has_nothrow_default_constructor : public has_nothrow_constructor<T>{};
                                                                   ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_default_constructor<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:40:34: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    D() BOOST_NOEXCEPT_IF(boost::has_nothrow_default_constructor<T>::value) : t() {}                             \
                                 ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:51:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/graph/adjacency_list.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered_set.hpp:17:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/unordered_set.hpp:20:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/detail/set.hpp:6:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/unordered/detail/implementation.hpp:39:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/is_nothrow_move_assignable.hpp:16:
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins]
      BOOST_HAS_NOTHROW_ASSIGN(T)
      ^
/data/gannet/ripley/R/test-clang/BH/include/boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN'
#     define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile<T>::value && is_assignable<T&, const T&>::value)
                                          ^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_assign<unsigned int>' requested here
BOOST_STRONG_TYPEDEF(unsigned int, version_type)
^
/data/gannet/ripley/R/test-clang/BH/include/boost/serialization/strong_typedef.hpp:42:57: note: expanded from macro 'BOOST_STRONG_TYPEDEF'
    D& operator=(const D& rhs) BOOST_NOEXCEPT_IF(boost::has_nothrow_assign<T>::value) {t = rhs.t; return *this;} \
                                                        ^
In file included from Mating.cpp:45:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<const std::error_category *, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:692:18: note: in instantiation of template class 'boost::hash_detail::hash_base<const std::error_category *>' requested here
        : public boost::hash_detail::hash_base<T*>
                 ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:420:24: note: in instantiation of template class 'boost::hash<const std::error_category *>' requested here
        boost::hash<T> hasher;
                       ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:551:9: note: in instantiation of function template specialization 'boost::hash_combine<const std::error_category *>' requested here
        hash_combine(seed, &v.category());
        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<const std::error_category *, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
36 warnings generated.
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<const std::error_category *, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:692:18: note: in instantiation of template class 'boost::hash_detail::hash_base<const std::error_category *>' requested here
        : public boost::hash_detail::hash_base<T*>
                 ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:420:24: note: in instantiation of template class 'boost::hash<const std::error_category *>' requested here
        boost::hash<T> hasher;
                       ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:551:9: note: in instantiation of function template specialization 'boost::hash_combine<const std::error_category *>' requested here
        hash_combine(seed, &v.category());
        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<const std::error_category *, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:50:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset.hpp:15:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/dynamic_bitset/dynamic_bitset.hpp:53:
In file included from /data/gannet/ripley/R/test-clang/BH/include/boost/functional/hash/hash.hpp:6:
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:132:33: warning: 'unary_function<const std::error_category *, unsigned long>' is deprecated [-Wdeprecated-declarations]
        struct hash_base : std::unary_function<T, std::size_t> {};
                                ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:692:18: note: in instantiation of template class 'boost::hash_detail::hash_base<const std::error_category *>' requested here
        : public boost::hash_detail::hash_base<T*>
                 ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:420:24: note: in instantiation of template class 'boost::hash<const std::error_category *>' requested here
        boost::hash<T> hasher;
                       ^
/data/gannet/ripley/R/test-clang/BH/include/boost/container_hash/hash.hpp:551:9: note: in instantiation of function template specialization 'boost::hash_combine<const std::error_category *>' requested here
        hash_combine(seed, &v.category());
        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__functional/unary_function.h:23:29: note: 'unary_function<const std::error_category *, unsigned long>' has been explicitly marked deprecated here
struct _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 unary_function
                            ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:788:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
#    define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
                                        ^
/usr/local/clang-trunk0/bin/../include/c++/v1/__config:773:49: note: expanded from macro '_LIBCPP_DEPRECATED'
#      define _LIBCPP_DEPRECATED __attribute__((deprecated))
                                                ^
In file included from Trait.cpp:43:
In file included from ../inst/include/isqg.h:50:
In file included from ../inst/include/isqg/isqg.hpp:67:
../inst/include/isqg/Genetics.hpp:389:9: warning: private field 'extra' is not used [-Wunused-private-field]
  SEXP  extra ; // holds any extra information to generate breeding values
        ^
37 warnings generated.
36 warnings generated.
/usr/local/clang-trunk0/bin/clang++ -std=gnu++14 -shared -L/usr/local/clang/lib64 -L/usr/local/clang-trunk/lib -L/usr/local/lib64 -o isqg.so Genetics.o Mating.o RcppExports.o Trait.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/isqg/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/isqg/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/isqg/src'
installing to /data/gannet/ripley/R/packages/tests-clang/isqg.Rcheck/00LOCK-isqg/00new/isqg/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (isqg)