- using R Under development (unstable) (2024-11-22 r87365)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 19.1.3
flang-new version 19.1.3
- running under: Fedora Linux 36 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘hBayesDM/DESCRIPTION’ ... OK
- this is package ‘hBayesDM’ version ‘1.2.1’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘hBayesDM’ can be installed ... [221s/320s] OK
See the install log for details.
- used C++ compiler: ‘clang version 19.1.3’
- checking C++ specification ... NOTE
Specified C++14: please drop specification unless essential
- checking installed package size ... INFO
installed size is 5.1Mb
sub-directories of 1Mb or more:
R 2.6Mb
extdata 1.3Mb
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... [13s/22s] OK
- checking whether startup messages can be suppressed ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [125s/169s] OK
- checking Rd files ... NOTE
checkRd: (-1) alt_delta.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"alt_delta"}).}
| ^
checkRd: (-1) alt_gamma.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"alt_gamma"}).}
| ^
checkRd: (-1) bandit2arm_delta.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"bandit2arm_delta"}).}
| ^
checkRd: (-1) bandit4arm2_kalman_filter.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"bandit4arm2_kalman_filter"}).}
| ^
checkRd: (-1) bandit4arm_2par_lapse.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"bandit4arm_2par_lapse"}).}
| ^
checkRd: (-1) bandit4arm_4par.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"bandit4arm_4par"}).}
| ^
checkRd: (-1) bandit4arm_lapse.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"bandit4arm_lapse"}).}
| ^
checkRd: (-1) bandit4arm_lapse_decay.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"bandit4arm_lapse_decay"}).}
| ^
checkRd: (-1) bandit4arm_singleA_lapse.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"bandit4arm_singleA_lapse"}).}
| ^
checkRd: (-1) banditNarm_2par_lapse.Rd:85: Lost braces
85 | \item{model}{Character value that is the name of the model (\\code{"banditNarm_2par_lapse"}).}
| ^
checkRd: (-1) banditNarm_4par.Rd:85: Lost braces
85 | \item{model}{Character value that is the name of the model (\\code{"banditNarm_4par"}).}
| ^
checkRd: (-1) banditNarm_delta.Rd:85: Lost braces
85 | \item{model}{Character value that is the name of the model (\\code{"banditNarm_delta"}).}
| ^
checkRd: (-1) banditNarm_kalman_filter.Rd:85: Lost braces
85 | \item{model}{Character value that is the name of the model (\\code{"banditNarm_kalman_filter"}).}
| ^
checkRd: (-1) banditNarm_lapse.Rd:85: Lost braces
85 | \item{model}{Character value that is the name of the model (\\code{"banditNarm_lapse"}).}
| ^
checkRd: (-1) banditNarm_lapse_decay.Rd:85: Lost braces
85 | \item{model}{Character value that is the name of the model (\\code{"banditNarm_lapse_decay"}).}
| ^
checkRd: (-1) banditNarm_singleA_lapse.Rd:85: Lost braces
85 | \item{model}{Character value that is the name of the model (\\code{"banditNarm_singleA_lapse"}).}
| ^
checkRd: (-1) bart_ewmv.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"bart_ewmv"}).}
| ^
checkRd: (-1) bart_par4.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"bart_par4"}).}
| ^
checkRd: (-1) cgt_cm.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"cgt_cm"}).}
| ^
checkRd: (-1) choiceRT_ddm.Rd:85: Lost braces
85 | \item{model}{Character value that is the name of the model (\\code{"choiceRT_ddm"}).}
| ^
checkRd: (-1) choiceRT_ddm_single.Rd:85: Lost braces
85 | \item{model}{Character value that is the name of the model (\\code{"choiceRT_ddm_single"}).}
| ^
checkRd: (-1) cra_exp.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"cra_exp"}).}
| ^
checkRd: (-1) cra_linear.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"cra_linear"}).}
| ^
checkRd: (-1) dbdm_prob_weight.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"dbdm_prob_weight"}).}
| ^
checkRd: (-1) dd_cs.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"dd_cs"}).}
| ^
checkRd: (-1) dd_cs_single.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"dd_cs_single"}).}
| ^
checkRd: (-1) dd_exp.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"dd_exp"}).}
| ^
checkRd: (-1) dd_hyperbolic.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"dd_hyperbolic"}).}
| ^
checkRd: (-1) dd_hyperbolic_single.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"dd_hyperbolic_single"}).}
| ^
checkRd: (-1) gng_m1.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"gng_m1"}).}
| ^
checkRd: (-1) gng_m2.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"gng_m2"}).}
| ^
checkRd: (-1) gng_m3.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"gng_m3"}).}
| ^
checkRd: (-1) gng_m4.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"gng_m4"}).}
| ^
checkRd: (-1) igt_orl.Rd:85: Lost braces
85 | \item{model}{Character value that is the name of the model (\\code{"igt_orl"}).}
| ^
checkRd: (-1) igt_pvl_decay.Rd:85: Lost braces
85 | \item{model}{Character value that is the name of the model (\\code{"igt_pvl_decay"}).}
| ^
checkRd: (-1) igt_pvl_delta.Rd:85: Lost braces
85 | \item{model}{Character value that is the name of the model (\\code{"igt_pvl_delta"}).}
| ^
checkRd: (-1) igt_vpp.Rd:85: Lost braces
85 | \item{model}{Character value that is the name of the model (\\code{"igt_vpp"}).}
| ^
checkRd: (-1) peer_ocu.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"peer_ocu"}).}
| ^
checkRd: (-1) prl_ewa.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"prl_ewa"}).}
| ^
checkRd: (-1) prl_fictitious.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"prl_fictitious"}).}
| ^
checkRd: (-1) prl_fictitious_multipleB.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"prl_fictitious_multipleB"}).}
| ^
checkRd: (-1) prl_fictitious_rp.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"prl_fictitious_rp"}).}
| ^
checkRd: (-1) prl_fictitious_rp_woa.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"prl_fictitious_rp_woa"}).}
| ^
checkRd: (-1) prl_fictitious_woa.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"prl_fictitious_woa"}).}
| ^
checkRd: (-1) prl_rp.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"prl_rp"}).}
| ^
checkRd: (-1) prl_rp_multipleB.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"prl_rp_multipleB"}).}
| ^
checkRd: (-1) pstRT_ddm.Rd:85: Lost braces
85 | \item{model}{Character value that is the name of the model (\\code{"pstRT_ddm"}).}
| ^
checkRd: (-1) pstRT_rlddm1.Rd:85: Lost braces
85 | \item{model}{Character value that is the name of the model (\\code{"pstRT_rlddm1"}).}
| ^
checkRd: (-1) pstRT_rlddm6.Rd:85: Lost braces
85 | \item{model}{Character value that is the name of the model (\\code{"pstRT_rlddm6"}).}
| ^
checkRd: (-1) pst_Q.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"pst_Q"}).}
| ^
checkRd: (-1) pst_gainloss_Q.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"pst_gainloss_Q"}).}
| ^
checkRd: (-1) ra_noLA.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"ra_noLA"}).}
| ^
checkRd: (-1) ra_noRA.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"ra_noRA"}).}
| ^
checkRd: (-1) ra_prospect.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"ra_prospect"}).}
| ^
checkRd: (-1) rdt_happiness.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"rdt_happiness"}).}
| ^
checkRd: (-1) task2AFC_sdt.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"task2AFC_sdt"}).}
| ^
checkRd: (-1) ts_par4.Rd:85: Lost braces
85 | \item{model}{Character value that is the name of the model (\\code{"ts_par4"}).}
| ^
checkRd: (-1) ts_par6.Rd:85: Lost braces
85 | \item{model}{Character value that is the name of the model (\\code{"ts_par6"}).}
| ^
checkRd: (-1) ts_par7.Rd:85: Lost braces
85 | \item{model}{Character value that is the name of the model (\\code{"ts_par7"}).}
| ^
checkRd: (-1) ug_bayes.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"ug_bayes"}).}
| ^
checkRd: (-1) ug_delta.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"ug_delta"}).}
| ^
checkRd: (-1) wcs_sql.Rd:74: Lost braces
74 | \item{model}{Character value that is the name of the model (\\code{"wcs_sql"}).}
| ^
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... INFO
GNU make is a SystemRequirements.
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking examples ... [13s/19s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [18s/33s] OK
Running ‘testthat.R’ [17s/32s]
- checking PDF version of manual ... [20s/36s] OK
- checking HTML version of manual ... [15s/22s] OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 2 NOTEs