- using R Under development (unstable) (2021-01-15 r79833)
- using platform: x86_64-pc-linux-gnu (64-bit)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘gstat/DESCRIPTION’ ... OK
- this is package ‘gstat’ version ‘2.0-6’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘gstat’ can be installed ... [29s/36s] OK
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [32s/39s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in shell scripts ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [18s/20s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [55s/68s] OK
Running ‘allier.R’
Comparing ‘allier.Rout’ to ‘allier.Rout.save’ ... OK
Running ‘blockkr.R’
Comparing ‘blockkr.Rout’ to ‘blockkr.Rout.save’ ... OK
Running ‘covtable.R’
Comparing ‘covtable.Rout’ to ‘covtable.Rout.save’ ... OK
Running ‘cv.R’
Comparing ‘cv.Rout’ to ‘cv.Rout.save’ ... OK
Running ‘cv3d.R’
Comparing ‘cv3d.Rout’ to ‘cv3d.Rout.save’ ... OK
Running ‘fit.R’
Comparing ‘fit.Rout’ to ‘fit.Rout.save’ ... OK
Running ‘krige0.R’
Comparing ‘krige0.Rout’ to ‘krige0.Rout.save’ ... OK
Running ‘line.R’
Comparing ‘line.Rout’ to ‘line.Rout.save’ ... OK
Running ‘merge.R’
Comparing ‘merge.Rout’ to ‘merge.Rout.save’ ... OK
Running ‘na.action.R’
Comparing ‘na.action.Rout’ to ‘na.action.Rout.save’ ... OK
Running ‘rings.R’
Comparing ‘rings.Rout’ to ‘rings.Rout.save’ ... OK
Running ‘sim.R’
Comparing ‘sim.Rout’ to ‘sim.Rout.save’ ... OK
Running ‘stars.R’ [10s/12s]
Comparing ‘stars.Rout’ to ‘stars.Rout.save’ ...41,43d40
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO", prefer_proj = prefer_proj) :
< Discarded datum Amersfoort in CRS definition
52,60d48
< Warning messages:
< 1: In proj4string(d$data) :
< CRS object has comment, which is lost in output
< 2: In proj4string(newdata) :
< CRS object has comment, which is lost in output
< 3: In proj4string(newdata) :
< CRS object has comment, which is lost in output
< 4: In showSRID(uprojargs, format = "PROJ", multiline = "NO", prefer_proj = prefer_proj) :
< Discarded datum Unknown based on Bessel 1841 ellipsoid in CRS definition
63,71d50
< Warning messages:
< 1: In proj4string(d$data) :
< CRS object has comment, which is lost in output
< 2: In proj4string(newdata) :
< CRS object has comment, which is lost in output
< 3: In proj4string(newdata) :
< CRS object has comment, which is lost in output
< 4: In showSRID(uprojargs, format = "PROJ", multiline = "NO", prefer_proj = prefer_proj) :
< Discarded datum Unknown based on Bessel 1841 ellipsoid in CRS definition
112,114d90
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO", prefer_proj = prefer_proj) :
< Discarded datum Amersfoort in CRS definition
117,121d92
< Warning messages:
< 1: In showSRID(uprojargs, format = "PROJ", multiline = "NO", prefer_proj = prefer_proj) :
< Discarded datum Unknown based on Bessel 1841 ellipsoid in CRS definition
< 2: In showSRID(SRS_string, format = "PROJ", multiline = "NO", prefer_proj = prefer_proj) :
< Discarded datum Amersfoort in CRS definition
131,135d101
< Warning messages:
< 1: In showSRID(uprojargs, format = "PROJ", multiline = "NO", prefer_proj = prefer_proj) :
< Discarded datum Unknown based on Bessel 1841 ellipsoid in CRS definition
< 2: In showSRID(SRS_string, format = "PROJ", multiline = "NO", prefer_proj = prefer_proj) :
< Discarded datum Amersfoort in CRS definition
140,145c106,108
< [4] "Attributes: < Component \"proj4string\": Attributes: < Component \"comment\": 1 string mismatch > >"
< Warning messages:
< 1: In showSRID(uprojargs, format = "PROJ", multiline = "NO", prefer_proj = prefer_proj) :
< Discarded datum Unknown based on Bessel 1841 ellipsoid in CRS definition
< 2: In showSRID(SRS_string, format = "PROJ", multiline = "NO", prefer_proj = prefer_proj) :
< Discarded datum Amersfoort in CRS definition
---
> [4] "Attributes: < Component \"proj4string\": Attributes: < Names: 1 string mismatch > >"
> [5] "Attributes: < Component \"proj4string\": Attributes: < Length mismatch: comparison on first 2 components > >"
> [6] "Attributes: < Component \"proj4string\": Attributes: < Component 2: 1 string mismatch > >"
165,166c128,129
< x 1 78 178440 40 Amersfoort / RD New FALSE NULL [x]
< y 1 104 333760 -40 Amersfoort / RD New FALSE NULL [y]
---
> x 1 78 178440 40 +proj=sterea +lat_0=52.15... FALSE NULL [x]
> y 1 104 333760 -40 +proj=sterea +lat_0=52.15... FALSE NULL [y]
168,172d130
< Warning messages:
< 1: In sp::proj4string(.x) :
< CRS object has comment, which is lost in output
< 2: In sp::proj4string(.x) :
< CRS object has comment, which is lost in output
192c150
< User input: Amersfoort / RD New
---
> User input: unknown
194,198c152,157
< PROJCRS["Amersfoort / RD New",
< BASEGEOGCRS["Amersfoort",
< DATUM["Amersfoort",
< ELLIPSOID["Bessel 1841",6377397.155,299.152812800003,
< LENGTHUNIT["metre",1]]],
---
> PROJCRS["unknown",
> BASEGEOGCRS["unknown",
> DATUM["Unknown_based_on_Bessel_1841_ellipsoid",
> ELLIPSOID["Bessel 1841",6377397.155,299.1528128,
> LENGTHUNIT["metre",1,
> ID["EPSG",9001]]]],
200,201c159,160
< ANGLEUNIT["degree",0.0174532925199433]],
< ID["EPSG",4289]],
---
> ANGLEUNIT["degree",0.0174532925199433,
> ID["EPSG",9122]]]],
272,274d230
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO", prefer_proj = prefer_proj) :
< Discarded datum Unknown based on Bessel 1841 ellipsoid in CRS definition
330,334d285
< Warning messages:
< 1: In sp::proj4string(.x) :
< CRS object has comment, which is lost in output
< 2: In sp::proj4string(.x) :
< CRS object has comment, which is lost in output
348,349c299,300
< x 1 78 178440 40 +proj=sterea +lat_0=52.15... NA NULL
< y 1 104 333760 -40 +proj=sterea +lat_0=52.15... NA NULL
---
> x 1 78 178440 40 +init=epsg:28992 +proj=st... NA NULL
> y 1 104 333760 -40 +init=epsg:28992 +proj=st... NA NULL
358,362d308
< Warning messages:
< 1: In sp::proj4string(.x) :
< CRS object has comment, which is lost in output
< 2: In sp::proj4string(.x) :
< CRS object has comment, which is lost in output
Running ‘unproj.R’
Comparing ‘unproj.Rout’ to ‘unproj.Rout.save’ ...13,15d12
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO", prefer_proj = prefer_proj) :
< Discarded datum Amersfoort in CRS definition
18,20d14
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO", prefer_proj = prefer_proj) :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
91,93d84
< Warning message:
< In showSRID(uprojargs, format = "PROJ", multiline = "NO", prefer_proj = prefer_proj) :
< Discarded datum Unknown based on WGS84 ellipsoid in CRS definition
Running ‘variogram.R’
Comparing ‘variogram.Rout’ to ‘variogram.Rout.save’ ... OK
Running ‘vdist.R’
Comparing ‘vdist.Rout’ to ‘vdist.Rout.save’ ... OK
Running ‘windst.R’ [11s/13s]
Comparing ‘windst.Rout’ to ‘windst.Rout.save’ ...46,47d45
< Warning message:
< In proj4string(m) : CRS object has comment, which is lost in output
67,71d64
< Warning messages:
< 1: In proj4string(obj@sp) :
< CRS object has comment, which is lost in output
< 2: In proj4string(obj@sp) :
< CRS object has comment, which is lost in output
81,86c74,75
< Warning messages:
< 1: In proj4string(data@sp) :
< CRS object has comment, which is lost in output
< 2: In proj4string(newdata@sp) :
< CRS object has comment, which is lost in output
< 3: In krigeST(sqrt(values) ~ 1, w, STF(grd, tgrd), v) :
---
> Warning message:
> In krigeST(sqrt(values) ~ 1, w, STF(grd, tgrd), v) :
99,108c88,89
< Warning messages:
< 1: In sp::proj4string(.x@sp) :
< CRS object has comment, which is lost in output
< 2: In sp::proj4string(.x@sp) :
< CRS object has comment, which is lost in output
< 3: In proj4string(data@sp) :
< CRS object has comment, which is lost in output
< 4: In proj4string(newdata@sp) :
< CRS object has comment, which is lost in output
< 5: In krigeST(sqrt(values) ~ 1, st_as_stars(w), st_as_stars(newd), :
---
> Warning message:
> In krigeST(sqrt(values) ~ 1, st_as_stars(w), st_as_stars(newd), :
111,112d91
< 6: In sp::proj4string(.x@sp) :
< CRS object has comment, which is lost in output
115,116d93
< Warning message:
< In sp::proj4string(.x@sp) : CRS object has comment, which is lost in output
126,127d102
< Warning message:
< In sp::proj4string(.x@sp) : CRS object has comment, which is lost in output
142,143d116
< Warning message:
< In sp::proj4string(.x@sp) : CRS object has comment, which is lost in output
147,148d119
< Warning message:
< In sp::proj4string(.x@sp) : CRS object has comment, which is lost in output
158,159d128
< Warning message:
< In sp::proj4string(.x@sp) : CRS object has comment, which is lost in output
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking re-building of vignette outputs ... [66s/85s] OK
- checking PDF version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: OK