Install log for 'glmdisc'

* installing *source* package ‘glmdisc’ ...
** this is package ‘glmdisc’ version ‘0.8.1’
** package ‘glmdisc’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 23.1.5’
make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-clang/glmdisc/src'
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG  -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppEigen/include' -I'/data/localhost/ripley/R/test-clang/RcppNumerical/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw   -c RcppExports.cpp -o RcppExports.o
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG  -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppEigen/include' -I'/data/localhost/ripley/R/test-clang/RcppNumerical/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw   -c multinomial_link.cpp -o multinomial_link.o
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG  -I'/data/localhost/ripley/R/test-clang/Rcpp/include' -I'/data/localhost/ripley/R/test-clang/RcppEigen/include' -I'/data/localhost/ripley/R/test-clang/RcppNumerical/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw   -c rcpp_predictlogisticRegression.cpp -o rcpp_predictlogisticRegression.o
In file included from multinomial_link.cpp:8:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273 |       Index count = 0;
      |             ^
In file included from In file included from RcppExports.cpprcpp_predictlogisticRegression.cpp::43:
:
In file included from In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h/data/localhost/ripley/R/test-clang/RcppNumerical/include/RcppNumerical.h::2510:
:
In file included from In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h/data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h::2925:
:
In file included from In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse/data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h::2629:
:
In file included from In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse::6126:
:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h::61273:
:13/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:: 273:warning: 13variable 'count' set but not used [-Wunused-but-set-variable]:
 warning: variable 'count' set but not used [-Wunused-but-set-variable]
  273   | 273  |           I nIdnedxe xc ocuonutn t=  =0 ;0
;      
|                   ^| 
            ^
In file included from multinomial_link.cpp:8:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:29:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78 |   Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
      |         ^
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
   79 |   Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
      |         ^
In file included from In file included from rcpp_predictlogisticRegression.cppRcppExports.cpp::34:
:
In file included from In file included from /data/localhost/ripley/R/test-clang/RcppNumerical/include/RcppNumerical.h/data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h::1025:
:
In file included from In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h/data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h::2529:
:
In file included from In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse::2929:
:
In file included from In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU::2935:
:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h35::
78:/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h9::78 :9warning: : variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
   78    | 78  |   I nIdnedxe xn snuspuepre_re_te_tp_opsots t=  =0 ;0 ;/ // /N uNmubmebre ro fo fr erlealxaexde ds nsondoedse si ni np opsotsotrodredreerde de terteree e
       
|               ^| 
        ^
/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:/data/localhost/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h79::799::9 : warning: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]variable 'nsuper_et' set but not used [-Wunused-but-set-variable]

      7979 |  |     IInnddeexx  nnssuuppeerr__eett  ==  00;;  ////  NNuummbbeerr  ooff  rreellaaxxeedd  ssnnooddeess  iinn  tthhee  oorriiggiinnaall  eettrreeee  

            | |         ^        ^

In file included from multinomial_link.cpp:8:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h:25:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h:31:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
   72 |                         Index replacements = 0;
      |                               ^
In file included from In file included from rcpp_predictlogisticRegression.cppRcppExports.cpp::34:
:
In file included from In file included from /data/localhost/ripley/R/test-clang/RcppNumerical/include/RcppNumerical.h/data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h::1025:
:
In file included from In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h/data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h::2531:
:
In file included from In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers::3146:
:
In file included from /data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/IterativeSolvers:/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h46::
72:/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h10::72 :10warning: : variable 'replacements' set but not used [-Wunused-but-set-variable]
warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
      7272 |  |                                                 IInnddeexx  rreeppllaacceemmeennttss  ==  00;;

            | |                               ^                              ^

In file included from rcpp_predictlogisticRegression.cpp:3:
In file included from In file included from /data/localhost/ripley/R/test-clang/RcppNumerical/include/RcppNumerical.hRcppExports.cpp::104In file included from :
:
multinomial_link.cppIn file included from In file included from :/data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h/data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.h8:::
2525In file included from :
:
/data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigen.hIn file included from In file included from :/data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h/data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.h25:::
3737In file included from :
:
/data/localhost/ripley/R/test-clang/RcppEigen/include/RcppEigenForward.hIn file included from In file included from :/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra37:::
4545In file included from :
:
/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/SparseExtra:/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h45:::
246246::/data/localhost/ripley/R/test-clang/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h77:::246  :warning: 7variable 'count' set but not used [-Wunused-but-set-variable]warning: :variable 'count' set but not used [-Wunused-but-set-variable]
 
warning: variable 'count' set but not used [-Wunused-but-set-variable]
    246246 |  |     246  i | i nnt ti  ncctoouu ncntot  u==n  t00;; 

=             | | 0      ^      ^;


      |       ^
5 warnings generated.
5 warnings generated.
5 warnings generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -shared -L/usr/local/clang/lib64 -L/usr/local/clang23/lib -L/usr/local/clang23/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o glmdisc.so RcppExports.o multinomial_link.o rcpp_predictlogisticRegression.o
make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-clang/glmdisc/src'
make[1]: Entering directory '/data/localhost/ripley/R/packages/tests-clang/glmdisc/src'
make[1]: Leaving directory '/data/localhost/ripley/R/packages/tests-clang/glmdisc/src'
installing to /data/localhost/ripley/R/packages/tests-clang/glmdisc.Rcheck/00LOCK-glmdisc/00new/glmdisc/libs
** R
** inst
** byte-compile and prepare package for lazy loading
creating formal generic function 'plot' in package 'glmdisc'
creating formal generic function 'predict' in package 'glmdisc'
  using implicit definition in package 'stats'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (glmdisc)