* installing *source* package ‘glinvci’ ...
** this is package ‘glinvci’ version ‘1.2.4’
** package ‘glinvci’ successfully unpacked and MD5 sums checked
** using staged installation
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether /usr/local/clang21/bin/clang -std=gnu23 accepts -g... yes
checking for /usr/local/clang21/bin/clang -std=gnu23 option to accept ISO C89... unsupported
checking for /usr/local/clang21/bin/clang -std=gnu23 option to support OpenMP... -fopenmp
checking whether we are on Oracle C compiler... no
checking operating system... Linux
checking whether we are linking to OpenBLAS... no
checking whether we are using the GNU Fortran compiler... no
checking whether /usr/local/clang21/bin/flang accepts -g... yes
checking for Fortran flag to compile .f90 files... none
checking whether BLAS works correctly with OpenMP... yes
configure: creating ./config.status
config.status: creating src/my_pragma.h
config.status: creating src/Makevars
config.status: creating src/my_confinfo.h
** libs
using C compiler: ‘clang version 21.1.0-rc3’
using Fortran compiler: ‘flang version 21.1.0-rc3’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/glinvci/src'
/usr/local/clang21/bin/flang -fpic -O2 -pedantic -c dglinv.f90 -o dglinv.o
./dglinv.f90:1385:20: warning: Any pointer associated with TARGET dummy argument 'dfqk_cptr=' during this call must not be used afterwards, as 'dfqk1_ch' is not a target [-Wnon-target-passed-to-target]
call read_dfqk(dfqk1_ch, dfqk1)
^^^^^^^^
./dglinv.f90:1386:113: warning: Any pointer associated with TARGET dummy argument 'k=' during this call must not be used afterwards, as 'k' is not a target [-Wnon-target-passed-to-target]
call dqmmkda(fmlfm_c, qm_c, fm_c, a_c, kr, kv, ku, dodvev, dodphiev, dgamdvev, dgamdwev, dgamdphiev, dfqk1, K)
^
./dglinv.f90:1518:20: warning: Any pointer associated with TARGET dummy argument 'dfqk_cptr=' during this call must not be used afterwards, as 'dfqk1_ch' is not a target [-Wnon-target-passed-to-target]
call read_dfqk(dfqk1_ch, dfqk1)
^^^^^^^^
./dglinv.f90:1519:113: warning: Any pointer associated with TARGET dummy argument 'k=' during this call must not be used afterwards, as 'k' is not a target [-Wnon-target-passed-to-target]
call dqmmkda(fmlfm_c, qm_c, fm_c, a_c, kr, kv, ku, dodvev, dodphiev, dgamdvev, dgamdwev, dgamdphiev, dfqk1, K)
^
./dglinv.f90:1779:20: warning: Any pointer associated with TARGET dummy argument 'dfqk_cptr=' during this call must not be used afterwards, as 'dfqk1_ch' is not a target [-Wnon-target-passed-to-target]
call read_dfqk(dfqk1_ch, dfqk1)
^^^^^^^^
./dglinv.f90:1780:20: warning: Any pointer associated with TARGET dummy argument 'dfqk_cptr=' during this call must not be used afterwards, as 'dfqk1new_ch' is not a target [-Wnon-target-passed-to-target]
call read_dfqk(dfqk1new_ch, dfqk1new)
^^^^^^^^^^^
./dglinv.f90:1832:20: warning: Any pointer associated with TARGET dummy argument 'dfqk_cptr=' during this call must not be used afterwards, as 'dfqk1_ch' is not a target [-Wnon-target-passed-to-target]
call read_dfqk(dfqk1_ch, dfqk1)
^^^^^^^^
./dglinv.f90:1891:20: warning: Any pointer associated with TARGET dummy argument 'dfqk_cptr=' during this call must not be used afterwards, as 'dfqk1new_ch' is not a target [-Wnon-target-passed-to-target]
call read_dfqk(dfqk1new_ch, dfqk1new)
^^^^^^^^^^^
./dglinv.f90:1892:20: warning: Any pointer associated with TARGET dummy argument 'dfqk_cptr=' during this call must not be used afterwards, as 'dfqk1_ch' is not a target [-Wnon-target-passed-to-target]
call read_dfqk(dfqk1_ch, dfqk1)
^^^^^^^^
./dglinv.f90:1997:20: warning: Any pointer associated with TARGET dummy argument 'dfqk_cptr=' during this call must not be used afterwards, as 'dfqk1_ch' is not a target [-Wnon-target-passed-to-target]
call read_dfqk(dfqk1_ch, dfqk1)
^^^^^^^^
./dglinv.f90:2273:20: warning: Any pointer associated with TARGET dummy argument 'dfqk_cptr=' during this call must not be used afterwards, as 'dfqk1_ch' is not a target [-Wnon-target-passed-to-target]
call read_dfqk(dfqk1_ch, dfqk1)
^^^^^^^^
./dglinv.f90:2426:20: warning: Any pointer associated with TARGET dummy argument 'dfqk_cptr=' during this call must not be used afterwards, as 'dfqk1_ch' is not a target [-Wnon-target-passed-to-target]
call read_dfqk(dfqk1_ch, dfqk1)
^^^^^^^^
./dglinv.f90:2571:20: warning: Any pointer associated with TARGET dummy argument 'dfqk_cptr=' during this call must not be used afterwards, as 'dfqk1_ch' is not a target [-Wnon-target-passed-to-target]
call read_dfqk(dfqk1_ch, dfqk1)
^^^^^^^^
/usr/local/clang21/bin/clang -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang21/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c phytr.c -o phytr.o
/usr/local/clang21/bin/flang -fpic -O2 -pedantic -c oumods.f90 -o oumods.o
./oumods.f90:624:53: warning: Any pointer associated with TARGET dummy argument 'zwsp=' during this call must not be used afterwards, as 'zwsp' is not a target [-Wnon-target-passed-to-target]
call ouv(t,k,UijLt,P,invP,Lambda,out(1,m),zwsp,lzwsp,wsp(2*k**2+1),lwsp-2*k**2)
^^^^
./oumods.f90:651:44: warning: Any pointer associated with TARGET dummy argument 'zwsp=' during this call must not be used afterwards, as 'zwsp(1_8:int((k**2_4),kind=8):1_8)' is not a target [-Wnon-target-passed-to-target]
call d0phi(t, k, P, invP, Lambda, tmp, zwsp(1:(k**2)))
^^^^^^^^^^^^^^
./oumods.f90:1033:48: warning: Any pointer associated with TARGET dummy argument 'wsp=' during this call must not be used afterwards, as 'wsp' is not a target [-Wnon-target-passed-to-target]
call hvhadir (t,Psi,H,k,P,invP,Lambda,zout,wsp,lwsp,zwsp(((k**6)+1):lzwsp),lzwsp-(k**6),eigavail,info)
^^^
./oumods.f90:1076:18: warning: Any pointer associated with TARGET dummy argument 'zwsp=' during this call must not be used afterwards, as 'zwsp' is not a target [-Wnon-target-passed-to-target]
& zwsp, lzwsp, 1_c_int, info)
^^^^
./oumods.f90:1209:24: warning: Any pointer associated with TARGET dummy argument 'zwsp=' during this call must not be used afterwards, as 'zwsp' is not a target [-Wnon-target-passed-to-target]
& zwsp,lzwsp,wsp((3*(k**2)+1):lwsp),lwsp-3*(k**2))
^^^^
/usr/local/clang21/bin/flang -fpic -O2 -pedantic -c chn.f90 -o chn.o
/usr/local/clang21/bin/flang -fpic -O2 -pedantic -c test_ieee_fort.f90 -o test_ieee_fort.o
/usr/local/clang21/bin/clang -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang21/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c test_ieee_c.c -o test_ieee_c.o
/usr/local/clang21/bin/clang -std=gnu23 -shared -L/usr/local/clang/lib64 -L/usr/local/clang21/lib -L/usr/local/clang21/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -L/usr/local/clang21/lib/clang/21/lib/x86_64-unknown-linux-gnu -o glinvci.so dglinv.o phytr.o oumods.o chn.o test_ieee_fort.o test_ieee_c.o -fopenmp -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lflang_rt.runtime -lm -lflang_rt.runtime -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/glinvci/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/glinvci/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/glinvci/src'
installing to /data/gannet/ripley/R/packages/tests-clang/glinvci.Rcheck/00LOCK-glinvci/00new/glinvci/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (glinvci)