- using R Under development (unstable) (2025-09-11 r88813)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 21.1.1
flang version 21.1.1
- running under: Fedora Linux 42 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘gghalves/DESCRIPTION’ ... OK
- this is package ‘gghalves’ version ‘0.1.4’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘gghalves’ can be installed ... [10s/13s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from:
‘grDevices’ ‘gtable’
All declared Imports should be used.
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [13s/21s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [7s/11s] ERROR
Running examples in ‘gghalves-Ex.R’ failed
The error most likely occurred in:
> ### Name: geom_half_point
> ### Title: Points with jitter for half geoms.
> ### Aliases: geom_half_point
>
> ### ** Examples
>
> ggplot(iris, aes(x = Species, y = Petal.Width, fill = Species)) +
+ geom_half_point()
Error in `geom_half_point()`:
! Problem while converting geom to grob.
ℹ Error occurred in the 1st layer.
Caused by error in `fun()`:
! argument "layout" is missing, with no default
Backtrace:
▆
1. ├─base (local) `<fn>`(x)
2. ├─ggplot2 (local) `print.ggplot2::ggplot`(x)
3. │ ├─ggplot2::ggplot_gtable(data)
4. │ └─ggplot2 (local) `ggplot_gtable.ggplot2::ggplot_built`(data)
5. │ └─ggplot2:::by_layer(...)
6. │ ├─rlang::try_fetch(...)
7. │ │ ├─base::tryCatch(...)
8. │ │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
9. │ │ │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
10. │ │ │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
11. │ │ └─base::withCallingHandlers(...)
12. │ └─ggplot2 (local) f(l = layers[[i]], d = data[[i]])
13. │ └─l$draw_geom(d, layout)
14. │ └─ggplot2 (local) draw_geom(..., self = self)
15. │ └─self$geom$draw_layer(...)
16. │ └─ggplot2 (local) draw_layer(..., self = self)
17. │ └─base::lapply(...)
18. │ └─ggplot2 (local) FUN(X[[i]], ...)
19. │ ├─rlang::inject(self$draw_panel(data, panel_params, coord, !!!params))
20. │ └─self$draw_panel(...)
21. │ └─ggplot2 (local) draw_panel(..., self = self)
22. │ └─base::lapply(...)
23. │ └─ggplot2 (local) FUN(X[[i]], ...)
24. │ └─self$draw_group(group, panel_params, coord, ...)
25. │ └─gghalves (local) draw_group(...)
26. │ └─transformation$compute_layer(transformation_df, transformation_params_new)
27. │ └─ggplot2 (local) compute_layer(..., self = self)
28. │ └─ggplot2:::dapply(...)
29. │ └─base::lapply(...)
30. │ └─ggplot2 (local) FUN(X[[i]], ...)
31. │ └─ggplot2 (local) apply_fun(cur_data)
32. │ └─ggplot2 (local) fun(x, ...)
33. └─rlang (local) `<fn>`(`<gtvrErrr>`)
34. └─handlers[[1L]](cnd)
35. └─cli::cli_abort(...)
36. └─rlang::abort(...)
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... ERROR
Error(s) in re-building vignettes:
--- re-building ‘gghalves.Rmd’ using rmarkdown
Quitting from gghalves.Rmd:39-42 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NULL
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'gghalves.Rmd' failed with diagnostics:
Problem while converting geom to grob.
ℹ Error occurred in the 1st layer.
Caused by error in `fun()`:
! argument "layout" is missing, with no default
--- failed re-building ‘gghalves.Rmd’
SUMMARY: processing the following file failed:
‘gghalves.Rmd’
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 2 ERRORs, 1 NOTE