• using R Under development (unstable) (2025-12-04 r89091)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     clang version 21.1.6     flang version 21.1.6
• running under: Fedora Linux 42 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘ggeffects/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘ggeffects’ version ‘2.3.1’
• package encoding: UTF-8
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• checking whether package ‘ggeffects’ can be installed ... [25s/66s] OK See the install log for details.
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• checking top-level files ... OK
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• checking tests ... [4m/11m] ERROR   Running ‘testthat.R’ [4m/11m] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > library(testthat)   > library(ggeffects)   > test_check("ggeffects")   You are calculating adjusted predictions on the population-level (i.e.     `type = "fixed"`) for a *generalized* linear mixed model.     This may produce biased estimates due to Jensen's inequality. Consider     setting `bias_correction = TRUE` to correct for this bias.     See also the documentation of the `bias_correction` argument.      Not all rows are shown in the output. Use `print(..., n = Inf)` to show     all rows.      Not all rows are shown in the output. Use `print(..., n = Inf)` to show     all rows.   Running model...   Done!   Some of the focal terms are of type `character`. This may lead to     unexpected results. It is recommended to convert these variables to     factors before fitting the model.     The following variables are of type character: `brand`   Some of the focal terms are of type `character`. This may lead to     unexpected results. It is recommended to convert these variables to     factors before fitting the model.     The following variables are of type character: `brand`   Some of the focal terms are of type `character`. This may lead to     unexpected results. It is recommended to convert these variables to     factors before fitting the model.     The following variables are of type character: `brand`      Iteration 1 - deviance = 39.74973 - criterion = 0.8590917   Iteration 2 - deviance = 10.50328 - criterion = 2.758244   Iteration 3 - deviance = 9.231325 - criterion = 0.1363107   Iteration 4 - deviance = 9.227742 - criterion = 0.0003840654   Iteration 5 - deviance = 9.227742 - criterion = 3.446463e-09   converged   NOTE: Results may be misleading due to involvement in interactions   NOTE: Results may be misleading due to involvement in interactions      Re-fitting to get Hessian         Re-fitting to get Hessian         Re-fitting to get Hessian         Re-fitting to get Hessian         Re-fitting to get Hessian      Could not compute variance-covariance matrix of predictions. No     confidence intervals are returned.   Saving _problems/test-poly-zeroinf-27.R   Can't compute adjusted predictions, `effects::Effect()` returned an error.      Reason: Invalid operation on a survival time   You may try `ggpredict()` or `ggemmeans()`.      Can't compute adjusted predictions, `effects::Effect()` returned an error.      Reason: non-conformable arguments   You may try `ggpredict()` or `ggemmeans()`.      [ FAIL 1 | WARN 0 | SKIP 70 | PASS 496 ]      ══ Skipped tests (70) ══════════════════════════════════════════════════════════   • On CRAN (58): 'test-MCMCglmm.R:1:1', 'test-MixMod.R:1:1',     'test-averaging.R:1:1', 'test-avg_predictions.R:1:1',     'test-backtransform_response.R:1:1', 'test-bias_correction.R:1:1',     'test-brms-categ-cum.R:1:1', 'test-brms-monotonic.R:1:1',     'test-brms-ppd.R:1:1', 'test-brms-trial.R:1:1', 'test-clean_vars.R:1:1',     'test-clm.R:1:1', 'test-clm2.R:1:1', 'test-clmm.R:1:1',     'test-condition.R:1:1', 'test-correct_se_sorting.R:1:1',     'test-decimals.R:1:1', 'test-fixest.R:1:1', 'test-focal_only_random.R:1:1',     'test-format.R:1:1', 'test-gamlss.R:1:1', 'test-gamm4.R:1:1',     'test-glmer.R:2:1', 'test-glmmTMB.R:1:1', 'test-interval_re.R:1:1',     'test-ivreg.R:1:1', 'test-list_terms.R:32:1', 'test-lmer.R:1:1',     'test-mgcv.R:1:1', 'test-plot-from-vignettes.R:5:1',     'test-plot-ordinal-latent.R:1:1', 'test-plot-show_data.R:1:1',     'test-plot-survival.R:2:1', 'test-plot.R:1:1', 'test-polr.R:13:5',     'test-polr.R:43:5', 'test-pool_comparisons.R:1:1', 'test-print.R:1:1',     'test-print_digits.R:1:1', 'test-print_md.R:1:1',     'test-print_zero_inflation.R:1:1', 'test-resid_over_grid.R:33:5',     'test-rstanarm-ppd.R:1:1', 'test-rstanarm.R:1:1', 'test-sdmTMB.R:1:1',     'test-simulate.R:1:1', 'test-test_predictions-margin.R:1:1',     'test-test_predictions-mixed.R:1:1', 'test-test_predictions_emmeans.R:58:1',     'test-test_predictions_emmeans.R:73:1',     'test-test_predictions_ggeffects.R:115:1',     'test-test_predictions_ggeffects.R:164:1',     'test-test_predictions_ggeffects.R:183:3',     'test-test_predictions_ggeffects.R:226:5', 'test-vcov.R:1:1',     'test-vglm.R:1:1', 'test-zeroinfl.R:27:3', 'test-zi_prob.R:1:1'   • On Linux (10): 'test-brglm.R:1:1', 'test-ci_backticks-names.R:1:1',     'test-emmeans-weights.R:1:1', 'test-gee.R:1:1', 'test-ggaverage.R:1:1',     'test-glm.R:1:1', 'test-ordinal.R:1:1', 'test-print_subsets.R:1:1',     'test-print_test_predictions-ordinal.R:1:1',     'test-print_test_predictions.R:1:1'   • empty test (2): 'test-polr.R:136:5', 'test-polr.R:142:5'      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Error ('test-poly-zeroinf.R:27:3'): ggpredict, glmmTMB ──────────────────────   Error in `exp(prdat.sim$cond)`: non-numeric argument to mathematical function   Backtrace:       ▆    1. └─ggeffects::ggpredict(...) at test-poly-zeroinf.R:27:3    2. ├─base::do.call(ggpredict_helper, full_args)    3. └─ggeffects (local) `<fn>`(...)    4. ├─ggeffects::get_predictions(...)    5. └─ggeffects:::get_predictions.glmmTMB(...)      [ FAIL 1 | WARN 0 | SKIP 70 | PASS 496 ]   Error:   ! Test failures.   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... OK
• checking PDF version of manual ... [10s/37s] OK
• checking HTML version of manual ... [8s/29s] OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 1 ERROR