* installing *source* package ‘fio’ ...
** this is package ‘fio’ version ‘1.0.0’
** package ‘fio’ successfully unpacked and MD5 sums checked
** using staged installation
Using cargo 1.93.1 (083ac5135 2025-12-15) (Fedora 1.93.1-1.fc42)
Using rustc 1.93.1 (01f6ddf75 2026-02-11) (Fedora 1.93.1-1.fc42)
Building for CRAN.
Writing `src/Makevars`.
`tools/config.R` has finished.
** libs
using C compiler: ‘clang version 22.1.0 (https://github.com/llvm/llvm-project 4434dabb69916856b824f68a64b029c67175e532)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/fio/src'
clang-22 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang22/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c entrypoint.c -o entrypoint.o
if [ -d ./vendor ]; then \
echo "=== Using offline vendor directory ==="; \
mkdir -p /data/gannet/ripley/R/packages/tests-clang/fio/src/.cargo && \
cp rust/vendor-config.toml /data/gannet/ripley/R/packages/tests-clang/fio/src/.cargo/config.toml; \
elif [ -f ./rust/vendor.tar.xz ]; then \
echo "=== Using offline vendor tarball ==="; \
tar xf rust/vendor.tar.xz && \
mkdir -p /data/gannet/ripley/R/packages/tests-clang/fio/src/.cargo && \
cp rust/vendor-config.toml /data/gannet/ripley/R/packages/tests-clang/fio/src/.cargo/config.toml; \
fi
=== Using offline vendor tarball ===
export CARGO_HOME=/data/gannet/ripley/R/packages/tests-clang/fio/src/.cargo && \
export PATH="/usr/local/clang/bin:/data/gannet/ripley/bin:/usr/local/texbin:/usr/local/bin:/usr/sbin:/usr/lib64/qt-3.3/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/lib64/openmpi/bin:/data/gannet/ripley/.cargo/bin" && \
RUSTFLAGS=" --print=native-static-libs" cargo build -j 2 --offline --lib --release --manifest-path=./rust/Cargo.toml --target-dir ./rust/target
warning: a `-j` argument was passed to Cargo but Cargo is also configured with an external jobserver in its environment, ignoring the `-j` parameter
Compiling crossbeam-utils v0.8.21
Compiling autocfg v1.5.0
Compiling num-traits v0.2.19
Compiling bytemuck v1.24.0
Compiling nano-gemm-codegen v0.2.1
Compiling num-complex v0.4.6
Compiling proc-macro2 v1.0.101
Compiling paste v1.0.15
Compiling crossbeam-epoch v0.9.18
Compiling version_check v0.9.5
Compiling unicode-ident v1.0.19
Compiling libm v0.2.15
Compiling pulp v0.22.2
Compiling crossbeam-deque v0.8.6
Compiling rayon-core v1.13.0
Compiling bitflags v2.9.4
Compiling quote v1.0.40
Compiling raw-cpuid v11.6.0
Compiling reborrow v0.5.5
Compiling cfg-if v1.0.3
Compiling pulp-wasm-simd-flag v0.1.0
Compiling syn v2.0.106
Compiling dyn-stack-macros v0.1.3
Compiling either v1.15.0
Compiling rayon v1.11.0
Compiling dyn-stack v0.13.2
Compiling once_cell v1.21.3
Compiling seq-macro v0.3.6
Compiling nano-gemm-core v0.2.1
Compiling libc v0.2.176
Compiling gemm-common v0.19.0
Compiling nano-gemm-c32 v0.2.1
Compiling nano-gemm-c64 v0.2.1
Compiling nano-gemm-f64 v0.2.1
Compiling nano-gemm-f32 v0.2.1
Compiling extendr-ffi v0.8.1
Compiling crossbeam-channel v0.5.15
Compiling equator-macro v0.4.2
Compiling equator-macro v0.2.1
Compiling crossbeam-queue v0.3.12
Compiling crossbeam v0.8.4
Compiling equator v0.2.2
Compiling equator v0.4.2
Compiling gemm-c64 v0.19.0
Compiling gemm-f64 v0.19.0
Compiling gemm-f32 v0.19.0
Compiling gemm-c32 v0.19.0
Compiling atomic-wait v1.1.0
Compiling qd v0.8.0
Compiling equator-macro v0.6.0
Compiling generativity v1.1.0
Compiling extendr-api v0.8.1
Compiling faer-traits v0.24.0
Compiling equator v0.6.0
Compiling nano-gemm v0.2.2
Compiling spindle v0.2.6
Compiling gemm v0.19.0
Compiling extendr-macros v0.8.1
Compiling faer v0.24.0
Compiling num_cpus v1.17.0
Compiling fio v0.1.6 (/data/gannet/ripley/R/packages/tests-clang/fio/src/rust)
note: link against the following native artifacts when linking against this static library. The order and any duplication can be significant on some platforms.
note: native-static-libs: -lR -lgcc_s -lutil -lrt -lpthread -lm -ldl -lc
Finished `release` profile [optimized] target(s) in 9m 22s
# Always clean up CARGOTMP
rm -Rf /data/gannet/ripley/R/packages/tests-clang/fio/src/.cargo;
clang-22 -std=gnu23 -shared -L/usr/local/clang/lib64 -L/usr/local/clang22/lib -L/usr/local/clang22/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -L/usr/local/clang21/lib/clang/22/lib/x86_64-unknown-linux-gnu -o fio.so entrypoint.o -L./rust/target/release -lfio
rm -Rf /data/gannet/ripley/R/packages/tests-clang/fio/src/.cargo /data/gannet/ripley/R/packages/tests-clang/fio/src/vendor ./rust/target
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/fio/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/fio/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/fio/src'
installing to /data/gannet/ripley/R/packages/tests-clang/fio.Rcheck/00LOCK-fio/00new/fio/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (fio)