- using R Under development (unstable) (2026-09-29 r90592)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 23.1.2
flang version 23.1.2
- running under: Fedora Linux 44 (Server Edition)
- using session charset: UTF-8
* current time: 2026-09-29 12:57:03 UTC
- using option ‘--no-stop-on-test-error’
- checking for file ‘erplots/DESCRIPTION’ ... OK
- this is package ‘erplots’ version ‘0.1.2’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘erplots’ can be installed ... OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [29s/29s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [51s/51s] ERROR
Running ‘spelling.R’
Running ‘testthat.R’ [51s/51s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(erplots)
>
> test_check("erplots")
`er_style_data_hex()` does not encode `strata` -- its fill aesthetic already encodes point density, so all strata are pooled into a single hex-binned density.
`stat_bin()` using `bins = 30`. Pick better value `binwidth`.
`stat_bin()` using `bins = 30`. Pick better value `binwidth`.
<er_vpc>
plot variables:
- exposure: aucss
- response: ae1
- plot_by: aucss (continuous), 4 bins
plot layers: <none>
output built: no<er_vpc>
plot variables:
- exposure: aucss
- response: ae1
- plot_by: aucss (continuous), 4 bins
plot layers:
- observed: layer built
output built: no<er_vpc>
plot variables:
- exposure: aucss
- response: ae1
- plot_by: aucss (continuous), 4 bins
plot layers:
- observed: layer built
- simulated: 1500 simulated rows
output built: no<er_vpc>
plot variables:
- exposure: aucss
- response: ae1
- plot_by: aucss (continuous), 4 bins
plot layers:
- observed: layer built
- simulated: 1500 simulated rows
output built: yes`stratify_by` (`weight`) is numeric; splitting into 3 quantile bins for faceting. Pass a categorical variable to `stratify_by`, or set `n_strata` to change the bin count.
Saving _problems/test-toy-model-sync-18.R
Saving _problems/test-toy-model-sync-19.R
Saving _problems/test-toy-model-sync-20.R
Saving _problems/test-toy-model-sync-32.R
Saving _problems/test-toy-model-sync-33.R
Saving _problems/test-toy-model-sync-34.R
Saving _problems/test-toy-model-sync-50.R
Saving _problems/test-toy-model-sync-54.R
Saving _problems/test-toy-model-sync-70.R
Saving _problems/test-toy-model-sync-74.R
[ FAIL 10 | WARN 0 | SKIP 0 | PASS 1176 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-toy-model-sync.R:18:3'): er_predict() agrees between er_test_toy_model() and erglm for a binomial/logit fit ──
Expected `p_toy$fit_resp` to equal `p_glm$fit_resp`.
Differences:
`names(actual)` is a character vector ('1', '2', '3', '4', '5', ...)
`names(expected)` is absent
── Failure ('test-toy-model-sync.R:19:3'): er_predict() agrees between er_test_toy_model() and erglm for a binomial/logit fit ──
Expected `p_toy$ci_lower` to equal `p_glm$ci_lower`.
Differences:
`names(actual)` is a character vector ('1', '2', '3', '4', '5', ...)
`names(expected)` is absent
── Failure ('test-toy-model-sync.R:20:3'): er_predict() agrees between er_test_toy_model() and erglm for a binomial/logit fit ──
Expected `p_toy$ci_upper` to equal `p_glm$ci_upper`.
Differences:
`names(actual)` is a character vector ('1', '2', '3', '4', '5', ...)
`names(expected)` is absent
── Failure ('test-toy-model-sync.R:32:3'): er_predict() agrees between er_test_toy_model() and erglm for a gaussian/identity fit ──
Expected `p_toy$fit_resp` to equal `p_glm$fit_resp`.
Differences:
`names(actual)` is a character vector ('1', '2', '3', '4', '5', ...)
`names(expected)` is absent
── Failure ('test-toy-model-sync.R:33:3'): er_predict() agrees between er_test_toy_model() and erglm for a gaussian/identity fit ──
Expected `p_toy$ci_lower` to equal `p_glm$ci_lower`.
Differences:
`names(actual)` is a character vector ('1', '2', '3', '4', '5', ...)
`names(expected)` is absent
── Failure ('test-toy-model-sync.R:34:3'): er_predict() agrees between er_test_toy_model() and erglm for a gaussian/identity fit ──
Expected `p_toy$ci_upper` to equal `p_glm$ci_upper`.
Differences:
`names(actual)` is a character vector ('1', '2', '3', '4', '5', ...)
`names(expected)` is absent
── Failure ('test-toy-model-sync.R:47:3'): er_summary() agrees between er_test_toy_model() and erglm for a binomial/logit fit ──
Expected `...[]` to equal `...[]`.
Differences:
`class(actual)`: "tbl_df" "tbl" "data.frame"
`class(expected)`: "data.frame"
── Failure ('test-toy-model-sync.R:51:3'): er_summary() agrees between er_test_toy_model() and erglm for a binomial/logit fit ──
Expected `...[]` to equal `...[]`.
Differences:
`class(actual)`: "tbl_df" "tbl" "data.frame"
`class(expected)`: "data.frame"
── Failure ('test-toy-model-sync.R:67:3'): er_summary() agrees between er_test_toy_model() and erglm for a gaussian/identity fit ──
Expected `...[]` to equal `...[]`.
Differences:
`class(actual)`: "tbl_df" "tbl" "data.frame"
`class(expected)`: "data.frame"
── Failure ('test-toy-model-sync.R:71:3'): er_summary() agrees between er_test_toy_model() and erglm for a gaussian/identity fit ──
Expected `...[]` to equal `...[]`.
Differences:
`class(actual)`: "tbl_df" "tbl" "data.frame"
`class(expected)`: "data.frame"
[ FAIL 10 | WARN 0 | SKIP 0 | PASS 1176 ]
Error:
! Test failures.
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... OK
- checking PDF version of manual ... OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 ERROR