- using R Under development (unstable) (2022-06-24 r82518)
- using platform: x86_64-pc-linux-gnu (64-bit)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘emuR/DESCRIPTION’ ... OK
- this is package ‘emuR’ version ‘2.3.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘emuR’ can be installed ... [32s/40s] OK
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [74s/89s] OK
- checking Rd files ... NOTE
checkRd: (-1) cbind.trackdata.Rd:20: Escaped LaTeX specials: \$
checkRd: (-1) cbind.trackdata.Rd:24: Escaped LaTeX specials: \$ \$
checkRd: (-1) cbind.trackdata.Rd:14: Escaped LaTeX specials: \$ \$
checkRd: (-1) cbind.trackdata.Rd:15: Escaped LaTeX specials: \$
checkRd: (-1) cbind.trackdata.Rd:16: Escaped LaTeX specials: \$
checkRd: (-1) crplot.Rd:72: Escaped LaTeX specials: \$ \$ \$
checkRd: (-1) crplot.Rd:73: Escaped LaTeX specials: \$
checkRd: (-1) crplot.Rd:74: Escaped LaTeX specials: \$
checkRd: (-1) crplot.Rd:75: Escaped LaTeX specials: \$
checkRd: (-1) crplot.Rd:86: Escaped LaTeX specials: \$ \$
checkRd: (-1) dbtopower.Rd:29: Escaped LaTeX specials: \$
checkRd: (-1) demo.all.f0.Rd:8: Escaped LaTeX specials: \$ \$ \$
checkRd: (-1) demo.all.f0.Rd:10: Escaped LaTeX specials: \$
checkRd: (-1) demo.all.fm.Rd:8: Escaped LaTeX specials: \$
checkRd: (-1) demo.all.rms.Rd:8: Escaped LaTeX specials: \$ \$ \$
checkRd: (-1) demo.all.rms.Rd:10: Escaped LaTeX specials: \$
checkRd: (-1) demo.vowels.f0.Rd:7: Escaped LaTeX specials: \$ \$ \$
checkRd: (-1) demo.vowels.f0.Rd:9: Escaped LaTeX specials: \$
checkRd: (-1) demo.vowels.fm.Rd:7: Escaped LaTeX specials: \$
checkRd: (-1) epgplot.Rd:27: Escaped LaTeX specials: \$
checkRd: (-1) epgplot.Rd:56: Escaped LaTeX specials: \$
checkRd: (-1) fapply.Rd:18: Escaped LaTeX specials: \$
checkRd: (-1) fapply.Rd:39: Escaped LaTeX specials: \$
checkRd: (-1) locus.Rd:38: Escaped LaTeX specials: \$
checkRd: (-1) mu.colour.Rd:60: Escaped LaTeX specials: \$ \$ \$ \$
checkRd: (-1) mu.colour.Rd:61: Escaped LaTeX specials: \$ \$
checkRd: (-1) plot.spectral.Rd:52: Escaped LaTeX specials: \$
checkRd: (-1) rbind.trackdata.Rd:20: Escaped LaTeX specials: \$
checkRd: (-1) rbind.trackdata.Rd:25: Escaped LaTeX specials: \$ \$
checkRd: (-1) rbind.trackdata.Rd:14: Escaped LaTeX specials: \$ \$
checkRd: (-1) rbind.trackdata.Rd:15: Escaped LaTeX specials: \$
checkRd: (-1) rbind.trackdata.Rd:16: Escaped LaTeX specials: \$
checkRd: (-1) trackdata.Rd:11: Escaped LaTeX specials: \$
checkRd: (-1) trackdata.Rd:12: Escaped LaTeX specials: \$
checkRd: (-1) trackdata.Rd:13: Escaped LaTeX specials: \$
checkRd: (-1) trackdata.Rd:14: Escaped LaTeX specials: \$
checkRd: (-1) tracktimes.Rd:17: Escaped LaTeX specials: \$
checkRd: (-1) trapply.Rd:32: Escaped LaTeX specials: \$
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ... [13s/17s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [164s/211s] OK
Running ‘testthat.R’ [163s/211s]
- checking PDF version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 NOTE