• using R Under development (unstable) (2026-07-03 r90206)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     clang version 22.1.8 (https://github.com/llvm/llvm-project ca7933e47d3a3451d81e72ac174dcb5aa28b59d1)     flang version 22.1.8 (https://github.com/llvm/llvm-project ca7933e47d3a3451d81e72ac174dcb5aa28b59d1)
• running under: Fedora Linux 42 (Workstation Edition)
• using session charset: UTF-8 * current time: 2026-07-04 11:50:56 UTC
• using option ‘--no-stop-on-test-error’
• checking for file ‘duckspatial/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘duckspatial’ version ‘1.2.1’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘duckspatial’ can be installed ... [24s/36s] OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking whether startup messages can be suppressed ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [46s/51s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... INFO Undeclared package ‘tidyr’ in Rd xrefs
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... ERROR   Running ‘testthat.R’ Running the tests in ‘tests/testthat.R’ failed. Complete output:   > # This file is part of the standard setup for testthat.   > # It is recommended that you do not modify it.   > #   > # Where should you do additional test configuration?   > # Learn more about the roles of various files in:   > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview   > # * https://testthat.r-lib.org/articles/special-files.html   >   > library(testthat)   > library(duckspatial)   duckspatial 1.2.1 attached   * Compatible with DuckDB >= v1.5.4.2      Default output has changed on v1.0.0:     duckspatial now returns lazy `duckspatial_df` (dbplyr) objects     instead of `sf` objects.      To restore the previous behaviour:     ddbs_options(mode = 'sf')   > library(duckdb)   Loading required package: DBI   >   > test_check("duckspatial")   Reading layer `countries' from data source     `/data/gannet/ripley/R/packages/tests-clang/duckspatial.Rcheck/duckspatial/spatial/countries.geojson'     using driver `GeoJSON'   Simple feature collection with 257 features and 6 fields   Geometry type: POLYGON   Dimension: XY   Bounding box: xmin: -178.9125 ymin: -89.9 xmax: 180 ymax: 83.65187   Geodetic CRS: WGS 84   Reading layer `argentina' from data source     `/data/gannet/ripley/R/packages/tests-clang/duckspatial.Rcheck/duckspatial/spatial/argentina.geojson'     using driver `GeoJSON'   Simple feature collection with 1 feature and 6 fields   Geometry type: POLYGON   Dimension: XY   Bounding box: xmin: -73.52455 ymin: -52.39755 xmax: -53.62409 ymax: -21.81793   Geodetic CRS: WGS 84   Error in `source_dir()`:   ! Failed to evaluate './setup.R'.   Caused by error in `value[[3L]]()`:   ! Failed to load the spatial extension.   ✖ Invalid Error: Invalid Input Error: Initialization function     "spatial_duckdb_cpp_init" from file     "/data/gannet/ripley/R/test-clang/duckdb/extensions/v1.5.4/linux_amd64/spatial.duckdb_extension"     threw an exception: "Missing DB manager" ℹ Context: rapi_execute ℹ Error     type: INVALID   ℹ The binary may be corrupt or incompatible with this platform/DuckDB version.   ℹ Try reinstalling with `ddbs_install(extension = 'spatial', upgrade = TRUE)`   Backtrace:        ▆     1. └─testthat::test_check("duckspatial")     2. └─testthat::test_dir(...)     3. └─testthat:::test_files(...)     4. └─testthat:::test_files_serial(...)     5. └─testthat:::test_files_setup_state(...)     6. └─testthat::source_test_setup(".", env)     7. └─testthat::source_dir(path, "^setup.*\\.[rR]$", env = env, wrap = FALSE)     8. └─base::lapply(...)     9. └─testthat (local) FUN(X[[i]], ...)    10. └─testthat::source_file(...)    11. ├─base::withCallingHandlers(...)    12. └─base::eval(exprs, env)    13. └─base::eval(exprs, env)    14. ├─duckspatial::as_duckspatial_df(argentina_sf) at ./setup.R:15:1    15. └─duckspatial:::as_duckspatial_df.sf(argentina_sf)    16. └─duckspatial:::ddbs_default_conn()    17. └─duckspatial::ddbs_create_conn(dbdir = "memory", ...)    18. └─duckspatial::ddbs_load(conn, quiet = TRUE)    19. └─base::tryCatch(...)    20. └─base (local) tryCatchList(expr, classes, parentenv, handlers)    21. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])    22. └─value[[3L]](cond)    23. └─cli::cli_abort(...)    24. └─rlang::abort(...)   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [58s/80s] ERROR Error(s) in re-building vignettes: --- re-building ‘aw_interpolation.qmd’ using html  [31m processing file: aw_interpolation.qmd  [39m [31m[gannet:2612820:0:2613317] Caught signal 11 (Segmentation fault: Sent by the kernel at address (nil))  [39m [31m==== backtrace (tid:2613317) ====  0 /lib64/libucs.so.0(ucs_handle_error+0x2e4) [0x7f1a1a3e4df4]  1 /lib64/libucs.so.0(+0x17aed) [0x7f1a1a3e6aed]  2 /lib64/libucs.so.0(+0x17cbd) [0x7f1a1a3e6cbd]  3 /lib64/libc.so.6(+0x1a040) [0x7f1a30a29040]  4 /data/gannet/ripley/R/test-clang/duckdb/extensions/v1.5.4/linux_amd64/spatial.duckdb_extension(+0x1196b50) [0x7f18f8b96b50]  5 /data/gannet/ripley/R/test-clang/duckdb/extensions/v1.5.4/linux_amd64/spatial.duckdb_extension(+0x1168728) [0x7f18f8b68728]  6 /data/gannet/ripley/R/test-clang/duckdb/extensions/v1.5.4/linux_amd64/spatial.duckdb_extension(+0x773544) [0x7f18f8173544]  7 /data/gannet/ripley/R/test-clang/duckdb/extensions/v1.5.4/linux_amd64/spatial.duckdb_extension(+0x7718d9) [0x7f18f81718d9]  8 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb15ExtensionHelper29LoadExternalExtensionInternalERNS_16DatabaseInstanceERNS_10FileSystemERKNSt3__112basic_stringIcNS5_11char_traitsIcEENS5_9allocatorIcEEEERNS_19ExtensionActiveLoadE+0x18f) [0x7f195307f85f]  9 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb15ExtensionHelper21LoadExternalExtensionERNS_16DatabaseInstanceERNS_10FileSystemERKNSt3__112basic_stringIcNS5_11char_traitsIcEENS5_9allocatorIcEEEE+0x4a) [0x7f195307f60a] 10 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZNK6duckdb12PhysicalLoad15GetDataInternalERNS_16ExecutionContextERNS_9DataChunkERNS_19OperatorSourceInputE+0x151) [0x7f1953e6d401] 11 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb16PipelineExecutor15FetchFromSourceERNS_9DataChunkE+0x98) [0x7f19546a10c8] 12 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb16PipelineExecutor7ExecuteEm+0x146) [0x7f195469dca6] 13 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb12PipelineTask11ExecuteTaskENS_17TaskExecutionModeE+0x154) [0x7f195469d914] 14 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb12ExecutorTask7ExecuteENS_17TaskExecutionModeE+0xa0) [0x7f1954697570] 15 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb13TaskScheduler14ExecuteForeverEPNSt3__16atomicIbEE+0x39a) [0x7f19546a432a] 16 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(+0x1aafe9c) [0x7f19546afe9c] 17 /lib64/libc.so.6(+0x71f14) [0x7f1a30a80f14] 18 /lib64/libc.so.6(+0xf532c) [0x7f1a30b0432c] =================================  *** caught segfault ***  [39m [31maddress 0x4d20027de54, cause 'unknown'  [39m [31m Traceback:  1: rapi_execute(stmt, convert_opts)  2: withCallingHandlers(expr, condition = function(cnd) { { .__handler_frame__. <- TRUE .__setup_frame__. <- frame if (inherits(cnd, "message")) { except <- c("warning", "error") } else if (inherits(cnd, "warning")) { except <- "error" } else { except <- "" } } while (!is_null(cnd)) { if (inherits(cnd, "error")) { out <- handlers[[1L]](cnd) if (!inherits(out, "rlang_zap")) throw(out) } inherit <- .subset2(.subset2(cnd, "rlang"), "inherit") if (is_false(inherit)) { return() } cnd <- .subset2(cnd, "parent") }})  3: doTryCatch(return(expr), name, parentenv, handler)  [39m [31m 4: tryCatchOne(expr, names, parentenv, handlers[[1L]])  5: tryCatchList(expr, classes, parentenv, handlers)  6: tryCatch(withCallingHandlers(expr, condition = function(cnd) { { .__handler_frame__. <- TRUE .__setup_frame__. <- frame if (inherits(cnd, "message")) { except <- c("warning", "error") } else if (inherits(cnd, "warning")) { except <- "error" } else { except <- "" } } while (!is_null(cnd)) { if (inherits(cnd, "error")) { out <- handlers[[1L]](cnd) if (!inherits(out, "rlang_zap")) throw(out) } inherit <- .subset2(.subset2(cnd, "rlang"), "inherit") if (is_false(inherit)) { return() } cnd <- .subset2(cnd, "parent") }}), stackOverflowError = handlers[[1L]])  7: rlang::try_fetch(rapi_execute(stmt, convert_opts), error = function(e) { rethrow_error_from_rapi(e, call)})  8: rethrow_rapi_execute(res@stmt_lst$ref, duckdb_convert_opts_impl(res@connection@convert_opts, arrow = res@arrow))  9: duckdb_execute(res) 10: duckdb_result(connection = conn, stmt_lst = stmt_lst, arrow = arrow) 11: .local(conn, statement, ...) 12: dbSendQuery(conn, statement, ...) 13: dbSendQuery(conn, statement, ...) 14: dbSendStatement(conn, statement, ...) 15: dbSendStatement(conn, statement, ...) 16: DBI::dbExecute(conn, glue::glue("LOAD {extension};")) 17: DBI::dbExecute(conn, glue::glue("LOAD {extension};")) 18: withCallingHandlers(expr, message = function(c) if (inherits(c, classes)) tryInvokeRestart("muffleMessage")) 19: suppressMessages(DBI::dbExecute(conn, glue::glue("LOAD {extension};"))) 20: doTryCatch(return(expr), name, parentenv, handler) 21: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 22: tryCatchList(expr, classes, parentenv, handlers) 23: tryCatch({ suppressMessages(DBI::dbExecute(conn, glue::glue("LOAD {extension};")))}, error = function(e) { cli::cli_abort(c("Failed to load the {extension} extension.", x = conditionMessage(e), i = "The binary may be corrupt or incompatible with this platform/DuckDB version.", i = "Try reinstalling with {.code ddbs_install(extension = '{extension}', upgrade = TRUE)}"))}) 24: ddbs_load(conn, quiet = TRUE) 25: ddbs_create_conn(dbdir = "memory", ...) 26: ddbs_default_conn() 27: resolve_spatial_connections(target, source, conn, quiet = quiet) 28: ddbs_interpolate_aw(target = grid, source = nc, tid = "target_id", sid = "source_id", extensive = "BIR74", weight = "total", mode = "sf") 29: eval(expr, envir) 30: eval(expr, envir) 31: withVisible(eval(expr, envir)) 32: withCallingHandlers(code, error = function (e) rlang::entrace(e), message = function (cnd) { watcher$capture_plot_and_output() if (on_message$capture) { watcher$push(cnd) } if (on_message$silence) { invokeRestart("muffleMessage") }}, warning = function (cnd) { if (getOption("warn") >= 2 || getOption("warn") < 0) { return() } watcher$capture_plot_and_output() if (on_warning$capture) { cnd <- sanitize_call(cnd) watcher$push(cnd) } if (on_warning$silence) { invokeRestart("muffleWarning") }}, error = function (cnd) { watcher$capture_plot_and_output() cnd <- sanitize_call(cnd) watcher$push(cnd) switch(on_error, continue = invokeRestart("eval_continue"), stop = invokeRestart("eval_stop"), error = NULL)}) 33: eval(call) 34: eval(call) 35: with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers) 36: doWithOneRestart(return(expr), restart) 37: withOneRestart(expr, restarts[[1L]]) 38: withRestartList(expr, restarts[-nr]) 39: doWithOneRestart(return(expr), restart) 40: withOneRestart(withRestartList(expr, restarts[-nr]), restarts[[nr]]) 41: withRestartList(expr, restarts) 42: withRestarts(with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers), eval_continue = function() TRUE, eval_stop = function() FALSE) 43: evaluate::evaluate(...) 44: evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options)) 45: in_dir(input_dir(), expr) 46: in_input_dir(evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options))) 47: eng_r(options) 48: block_exec(params) 49: call_block(x) 50: process_group(group) 51: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }) 52: with_options(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }), list(rlang_trace_top_env = knit_global())) 53: xfun:::handle_error(with_options(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }), list(rlang_trace_top_env = knit_global())), function(loc) { setwd(wd) write_utf8(res, output %n% stdout()) paste0("\nQuitting from ", loc, if (!is.null(error)) paste0("\n", rule(), error, "\n", rule()))}, if (labels[i] != "") sprintf(" [%s]", labels[i]), get_loc) 54: process_file(text, output) 55: knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet) 56: rmarkdown::render(input = input, output_format = output_format, knit_root_dir = knit_root_dir, params = params, run_pandoc = FALSE, envir = env) 57: execute(params$input, params$format, params$tempDir, params$libDir, params$dependencies, params$cwd, params$params, params$resourceDir, params$handledLanguages, params$markdown) 58: .main() An irrecoverable exception occurred. R is aborting now ...  [39m [33mWARN: Error encountered when rendering files [39m Error: processing vignette 'aw_interpolation.qmd' failed with diagnostics: ! Error running quarto CLI from R. Caused by error: ! Could not parse cli `{}` expression: ` { .__han…`. Caused by error: ! <text>:1:49: unexpected symbol 1: { .__handler_frame__. <- TRUE .__setup_frame__.                                                     ^ --- failed re-building ‘aw_interpolation.qmd’ --- re-building ‘benchmark.qmd’ using html  [31m processing file: benchmark.qmd  [39m [31moutput file: benchmark.knit.md  [39m [1mpandoc [22m   to: html   output-file: benchmark.html   standalone: true   embed-resources: true   wrap: none   default-image-extension: png   css:     - >-       /data/gannet/ripley/R/test-clang/quarto/rmarkdown/template/quarto_vignette/resources/vignette.css   variables: {}     [1mmetadata [22m   document-css: false   lang: en   engines:     - path: /data/gannet/ripley/Sources/quarto-1.9.36/share/extension-subtrees/julia-engine/_extensions/julia-engine/julia-engine.js   minimal: true   theme: none   title: Benchmark   date: '`r Sys.Date()`'   code-annotations: hover   urlcolor: blue   vignette: |     %\VignetteIndexEntry{Benchmark} %\VignetteEngine{quarto::html} %\VignetteEncoding{UTF-8}   knitr:     opts_chunk:       collapse: true       comment: '#>'       out.width: 100%    Output created: benchmark.html --- finished re-building ‘benchmark.qmd’ --- re-building ‘duckspatial.qmd’ using html  [31m processing file: duckspatial.qmd  [39m [31m[gannet:2614911:0:2614911] Caught signal 11 (Segmentation fault: address not mapped to object at address 0xe)  [39m [31m==== backtrace (tid:2614911) ====  [39m [31m 0 /lib64/libucs.so.0(ucs_handle_error+0x2e4) [0x7efef3db7df4]  1 /lib64/libucs.so.0(+0x17aed) [0x7efef3db9aed]  2 /lib64/libucs.so.0(+0x17cbd) [0x7efef3db9cbd]  3 /lib64/libc.so.6(+0x1a040) [0x7eff0d229040]  4 /data/gannet/ripley/R/test-clang/duckdb/extensions/v1.5.4/linux_amd64/spatial.duckdb_extension(+0x1198730) [0x7efdd4b98730]  5 /data/gannet/ripley/R/test-clang/duckdb/extensions/v1.5.4/linux_amd64/spatial.duckdb_extension(+0x1168728) [0x7efdd4b68728]  6 /data/gannet/ripley/R/test-clang/duckdb/extensions/v1.5.4/linux_amd64/spatial.duckdb_extension(+0x773544) [0x7efdd4173544]  7 /data/gannet/ripley/R/test-clang/duckdb/extensions/v1.5.4/linux_amd64/spatial.duckdb_extension(+0x7718d9) [0x7efdd41718d9]  8 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb15ExtensionHelper29LoadExternalExtensionInternalERNS_16DatabaseInstanceERNS_10FileSystemERKNSt3__112basic_stringIcNS5_11char_traitsIcEENS5_9allocatorIcEEEERNS_19ExtensionActiveLoadE+0x18f) [0x7efef867f85f]  9 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb15ExtensionHelper21LoadExternalExtensionERNS_16DatabaseInstanceERNS_10FileSystemERKNSt3__112basic_stringIcNS5_11char_traitsIcEENS5_9allocatorIcEEEE+0x4a) [0x7efef867f60a] 10 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZNK6duckdb12PhysicalLoad15GetDataInternalERNS_16ExecutionContextERNS_9DataChunkERNS_19OperatorSourceInputE+0x151) [0x7efef946d401] 11 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb16PipelineExecutor15FetchFromSourceERNS_9DataChunkE+0x98) [0x7efef9ca10c8] 12 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb16PipelineExecutor7ExecuteEm+0x146) [0x7efef9c9dca6] 13 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb12PipelineTask11ExecuteTaskENS_17TaskExecutionModeE+0x112) [0x7efef9c9d8d2] 14 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb12ExecutorTask7ExecuteENS_17TaskExecutionModeE+0xa0) [0x7efef9c97570] 15 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb8Executor11ExecuteTaskEb+0x1c0) [0x7efef9c9c8d0] 16 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb13ClientContext19ExecuteTaskInternalERNS_17ClientContextLockERNS_15BaseQueryResultEb+0x40) [0x7efef9aa8c60] 17 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb18PendingQueryResult15ExecuteInternalERNS_17ClientContextLockE+0x7a) [0x7efef9aab3ba] 18 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb13ClientContext7ExecuteERKNSt3__112basic_stringIcNS1_11char_traitsIcEENS1_9allocatorIcEEEERNS_10shared_ptrINS_21PreparedStatementDataELb1EEERKNS_22PendingQueryParametersE+0xa0) [0x7efef9aab100] 19 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb17PreparedStatement7ExecuteERNSt3__113unordered_mapINS1_12basic_stringIcNS1_11char_traitsIcEENS1_9allocatorIcEEEENS_18BoundParameterDataENS_33CaseInsensitiveStringHashFunctionENS_29CaseInsensitiveStringEqualityENS6_INS1_4pairIKS8_S9_EEEEEEb+0x1c3) [0x7efef9ace3a3] 20 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb17PreparedStatement7ExecuteERNS_6vectorINS_5ValueELb1ENSt3__19allocatorIS2_EEEEb+0x172) [0x7efef9ace642] 21 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(+0x1087fc) [0x7efef83087fc] 22 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_duckdb_rapi_execute+0x63) [0x7efef8372f73] 23 /data/gannet/ripley/R/R-clang/bin/exec/R(+0x8f5c4) [0x55df310085c4] 24 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xdaea8) [0x55df31053ea8] 25 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc922c) [0x55df3104222c] 26 /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x1a5) [0x55df310419e5] 27 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc9484) [0x55df31042484] 28 /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x26e) [0x55df31041aae] 29 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc9484) [0x55df31042484] 30 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xdcfb0) [0x55df31055fb0] 31 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xcd669) [0x55df31046669] 32 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc922c) [0x55df3104222c] 33 /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x1a5) [0x55df310419e5] 34 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe0b49) [0x55df31059b49] 35 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe003b) [0x55df3105903b] 36 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc9907) [0x55df31042907] 37 /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x5f8) [0x55df31041e38] 38 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc9484) [0x55df31042484] 39 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xdcfb0) [0x55df31055fb0] 40 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xcd669) [0x55df31046669] 41 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc922c) [0x55df3104222c] 42 /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x1a5) [0x55df310419e5] 43 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe0b49) [0x55df31059b49] 44 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe003b) [0x55df3105903b] 45 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc9907) [0x55df31042907] 46 /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x5f8) [0x55df31041e38] 47 /data/gannet/ripley/R/test-clang/rlang/libs/rlang.so(+0x4983) [0x7eff0a678983] 48 /data/gannet/ripley/R/R-clang/bin/exec/R(+0x8d713) [0x55df31006713] 49 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xcfc64) [0x55df31048c64] 50 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc922c) [0x55df3104222c] 51 /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x1a5) [0x55df310419e5] 52 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe0b49) [0x55df31059b49] 53 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe003b) [0x55df3105903b] 54 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xc9907) [0x55df31042907] 55 /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x5f8) [0x55df31041e38] 56 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe5ea8) [0x55df3105eea8] 57 /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x3d0) [0x55df31041c10] 58 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe519b) [0x55df3105e19b] 59 /data/gannet/ripley/R/R-clang/bin/exec/R(Rf_eval+0x3d0) [0x55df31041c10] 60 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe0b49) [0x55df31059b49] 61 /data/gannet/ripley/R/R-clang/bin/exec/R(+0xe003b) [0x55df3105903b] =================================  *** caught segfault *** address 0x4d20027e67f, cause 'unknown'  [39m [31m Traceback:  1: rapi_execute(stmt, convert_opts)  2: withCallingHandlers(expr, condition = function(cnd) { { .__handler_frame__. <- TRUE .__setup_frame__. <- frame if (inherits(cnd, "message")) { except <- c("warning", "error") } else if (inherits(cnd, "warning")) { except <- "error" } else { except <- "" } } while (!is_null(cnd)) { if (inherits(cnd, "error")) { out <- handlers[[1L]](cnd) if (!inherits(out, "rlang_zap")) throw(out) } inherit <- .subset2(.subset2(cnd, "rlang"), "inherit") if (is_false(inherit)) { return() } cnd <- .subset2(cnd, "parent") }})  3: doTryCatch(return(expr), name, parentenv, handler)  4: tryCatchOne(expr, names, parentenv, handlers[[1L]])  5: tryCatchList(expr, classes, parentenv, handlers)  6: tryCatch(withCallingHandlers(expr, condition = function(cnd) { { .__handler_frame__. <- TRUE .__setup_frame__. <- frame if (inherits(cnd, "message")) { except <- c("warning", "error") } else if (inherits(cnd, "warning")) { except <- "error" } else { except <- "" } } while (!is_null(cnd)) { if (inherits(cnd, "error")) { out <- handlers[[1L]](cnd) if (!inherits(out, "rlang_zap")) throw(out) } inherit <- .subset2(.subset2(cnd, "rlang"), "inherit") if (is_false(inherit)) { return() } cnd <- .subset2(cnd, "parent") }}), stackOverflowError = handlers[[1L]])  7: rlang::try_fetch(rapi_execute(stmt, convert_opts), error = function(e) { rethrow_error_from_rapi(e, call)})  8: rethrow_rapi_execute(res@stmt_lst$ref, duckdb_convert_opts_impl(res@connection@convert_opts, arrow = res@arrow))  9: duckdb_execute(res) 10: duckdb_result(connection = conn, stmt_lst = stmt_lst, arrow = arrow) 11: .local(conn, statement, ...) 12: dbSendQuery(conn, statement, ...) 13: dbSendQuery(conn, statement, ...) 14: dbSendStatement(conn, statement, ...) 15: dbSendStatement(conn, statement, ...) 16: DBI::dbExecute(conn, glue::glue("LOAD {extension};")) 17: DBI::dbExecute(conn, glue::glue("LOAD {extension};")) 18: withCallingHandlers(expr, message = function(c) if (inherits(c, classes)) tryInvokeRestart("muffleMessage")) 19: suppressMessages(DBI::dbExecute(conn, glue::glue("LOAD {extension};"))) 20: doTryCatch(return(expr), name, parentenv, handler) 21: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 22: tryCatchList(expr, classes, parentenv, handlers) 23: tryCatch({ suppressMessages(DBI::dbExecute(conn, glue::glue("LOAD {extension};")))}, error = function(e) { cli::cli_abort(c("Failed to load the {extension} extension.", x = conditionMessage(e), i = "The binary may be corrupt or incompatible with this platform/DuckDB version.", i = "Try reinstalling with {.code ddbs_install(extension = '{extension}', upgrade = TRUE)}"))}) 24: ddbs_load(conn, quiet = TRUE) 25: ddbs_create_conn(dbdir = "memory", ...) 26: ddbs_default_conn() 27: ddbs_open_dataset(system.file("spatial/countries.geojson", package = "duckspatial")) 28: eval(expr, envir) 29: eval(expr, envir) 30: withVisible(eval(expr, envir)) 31: withCallingHandlers(code, error = function (e) rlang::entrace(e), message = function (cnd) { watcher$capture_plot_and_output() if (on_message$capture) { watcher$push(cnd) } if (on_message$silence) { invokeRestart("muffleMessage") }}, warning = function (cnd) { if (getOption("warn") >= 2 || getOption("warn") < 0) { return() } watcher$capture_plot_and_output() if (on_warning$capture) { cnd <- sanitize_call(cnd) watcher$push(cnd) } if (on_warning$silence) { invokeRestart("muffleWarning") }}, error = function (cnd) { watcher$capture_plot_and_output() cnd <- sanitize_call(cnd) watcher$push(cnd) switch(on_error, continue = invokeRestart("eval_continue"), stop = invokeRestart("eval_stop"), error = NULL)}) 32: eval(call) 33: eval(call) 34: with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers) 35: doWithOneRestart(return(expr), restart) 36: withOneRestart(expr, restarts[[1L]]) 37: withRestartList(expr, restarts[-nr]) 38: doWithOneRestart(return(expr), restart) 39: withOneRestart(withRestartList(expr, restarts[-nr]), restarts[[nr]]) 40: withRestartList(expr, restarts) 41: withRestarts(with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers), eval_continue = function() TRUE, eval_stop = function() FALSE) 42: evaluate::evaluate(...) 43: evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options)) 44: in_dir(input_dir(), expr) 45: in_input_dir(evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options))) 46: eng_r(options) 47: block_exec(params) 48: call_block(x) 49: process_group(group) 50: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }) 51: with_options(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }), list(rlang_trace_top_env = knit_global())) 52: xfun:::handle_error(with_options(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }), list(rlang_trace_top_env = knit_global())), function(loc) { setwd(wd) write_utf8(res, output %n% stdout()) paste0("\nQuitting from ", loc, if (!is.null(error)) paste0("\n", rule(), error, "\n", rule()))}, if (labels[i] != "") sprintf(" [%s]", labels[i]), get_loc) 53: process_file(text, output) 54: knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet) 55: rmarkdown::render(input = input, output_format = output_format, knit_root_dir = knit_root_dir, params = params, run_pandoc = FALSE, envir = env) 56: execute(params$input, params$format, params$tempDir, params$libDir, params$dependencies, params$cwd, params$params, params$resourceDir, params$handledLanguages, params$markdown) 57: .main() An irrecoverable exception occurred. R is aborting now ...  [39m [33mWARN: Error encountered when rendering files [39m Error: processing vignette 'duckspatial.qmd' failed with diagnostics: ! Error running quarto CLI from R. Caused by error: ! Could not parse cli `{}` expression: ` { .__han…`. Caused by error: ! <text>:1:49: unexpected symbol 1: { .__handler_frame__. <- TRUE .__setup_frame__.                                                     ^ --- failed re-building ‘duckspatial.qmd’ --- re-building ‘spatial_joins.qmd’ using html  [31m processing file: spatial_joins.qmd  [39m [31m[gannet:2617339:0:2617764] Caught signal 11 (Segmentation fault: address not mapped to object at address 0x29)  [39m [31m==== backtrace (tid:2617764) ====  0 /lib64/libucs.so.0(ucs_handle_error+0x2e4) [0x7f7e48ce3df4]  1 /lib64/libucs.so.0(+0x17aed) [0x7f7e48ce5aed]  2 /lib64/libucs.so.0(+0x17cbd) [0x7f7e48ce5cbd]  3 /lib64/libc.so.6(+0x1a040) [0x7f7e5f829040]  4 /data/gannet/ripley/R/test-clang/duckdb/extensions/v1.5.4/linux_amd64/spatial.duckdb_extension(+0x1198730) [0x7f7d28b98730]  5 /data/gannet/ripley/R/test-clang/duckdb/extensions/v1.5.4/linux_amd64/spatial.duckdb_extension(+0x1168728) [0x7f7d28b68728]  6 /data/gannet/ripley/R/test-clang/duckdb/extensions/v1.5.4/linux_amd64/spatial.duckdb_extension(+0x773544) [0x7f7d28173544]  7 /data/gannet/ripley/R/test-clang/duckdb/extensions/v1.5.4/linux_amd64/spatial.duckdb_extension(+0x7718d9) [0x7f7d281718d9]  8 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb15ExtensionHelper29LoadExternalExtensionInternalERNS_16DatabaseInstanceERNS_10FileSystemERKNSt3__112basic_stringIcNS5_11char_traitsIcEENS5_9allocatorIcEEEERNS_19ExtensionActiveLoadE+0x18f) [0x7f7d8207f85f]  9 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb15ExtensionHelper21LoadExternalExtensionERNS_16DatabaseInstanceERNS_10FileSystemERKNSt3__112basic_stringIcNS5_11char_traitsIcEENS5_9allocatorIcEEEE+0x4a) [0x7f7d8207f60a] 10 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZNK6duckdb12PhysicalLoad15GetDataInternalERNS_16ExecutionContextERNS_9DataChunkERNS_19OperatorSourceInputE+0x151) [0x7f7d82e6d401] 11 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb16PipelineExecutor15FetchFromSourceERNS_9DataChunkE+0x98) [0x7f7d836a10c8] 12 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb16PipelineExecutor7ExecuteEm+0x146) [0x7f7d8369dca6] 13 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb12PipelineTask11ExecuteTaskENS_17TaskExecutionModeE+0x154) [0x7f7d8369d914] 14 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb12ExecutorTask7ExecuteENS_17TaskExecutionModeE+0xa0) [0x7f7d83697570] 15 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb13TaskScheduler14ExecuteForeverEPNSt3__16atomicIbEE+0x39a) [0x7f7d836a432a] 16 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(+0x1aafe9c) [0x7f7d836afe9c] 17 /lib64/libc.so.6(+0x71f14) [0x7f7e5f880f14] 18 /lib64/libc.so.6(+0xf532c) [0x7f7e5f90432c] =================================  *** caught segfault *** address 0x4d20027effb, cause 'unknown'  [39m [31m Traceback:  1: rapi_execute(stmt, convert_opts)  2: withCallingHandlers(expr, condition = function(cnd) { { .__handler_frame__. <- TRUE .__setup_frame__. <- frame if (inherits(cnd, "message")) { except <- c("warning", "error") } else if (inherits(cnd, "warning")) { except <- "error" } else { except <- "" } } while (!is_null(cnd)) { if (inherits(cnd, "error")) { out <- handlers[[1L]](cnd) if (!inherits(out, "rlang_zap")) throw(out) } inherit <- .subset2(.subset2(cnd, "rlang"), "inherit") if (is_false(inherit)) { return() } cnd <- .subset2(cnd, "parent") }})  3: doTryCatch(return(expr), name, parentenv, handler)  4: tryCatchOne(expr, names, parentenv, handlers[[1L]])  5: tryCatchList(expr, classes, parentenv, handlers)  6: tryCatch(withCallingHandlers(expr, condition = function(cnd) { { .__handler_frame__. <- TRUE .__setup_frame__. <- frame if (inherits(cnd, "message")) { except <- c("warning", "error") } else if (inherits(cnd, "warning")) { except <- "error" } else { except <- "" } } while (!is_null(cnd)) { if (inherits(cnd, "error")) { out <- handlers[[1L]](cnd) if (!inherits(out, "rlang_zap")) throw(out) } inherit <- .subset2(.subset2(cnd, "rlang"), "inherit") if (is_false(inherit)) { return() } cnd <- .subset2(cnd, "parent") }}), stackOverflowError = handlers[[1L]])  7: rlang::try_fetch(rapi_execute(stmt, convert_opts), error = function(e) { rethrow_error_from_rapi(e, call)})  8: rethrow_rapi_execute(res@stmt_lst$ref, duckdb_convert_opts_impl(res@connection@convert_opts, arrow = res@arrow))  9: duckdb_execute(res) 10: duckdb_result(connection = conn, stmt_lst = stmt_lst, arrow = arrow) 11: .local(conn, statement, ...) 12: dbSendQuery(conn, statement, ...) 13: dbSendQuery(conn, statement, ...) 14: dbSendStatement(conn, statement, ...) 15: dbSendStatement(conn, statement, ...) 16: DBI::dbExecute(conn, glue::glue("LOAD {extension};")) 17: DBI::dbExecute(conn, glue::glue("LOAD {extension};")) 18: withCallingHandlers(expr, message = function(c) if (inherits(c, classes)) tryInvokeRestart("muffleMessage")) 19: suppressMessages(DBI::dbExecute(conn, glue::glue("LOAD {extension};"))) 20: doTryCatch(return(expr), name, parentenv, handler) 21: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 22: tryCatchList(expr, classes, parentenv, handlers) 23: tryCatch({ suppressMessages(DBI::dbExecute(conn, glue::glue("LOAD {extension};")))}, error = function(e) { cli::cli_abort(c("Failed to load the {extension} extension.", x = conditionMessage(e), i = "The binary may be corrupt or incompatible with this platform/DuckDB version.", i = "Try reinstalling with {.code ddbs_install(extension = '{extension}', upgrade = TRUE)}"))}) 24: ddbs_load(conn, quiet = TRUE) 25: ddbs_create_conn(dbdir = "memory", ...) 26: ddbs_default_conn() 27: resolve_spatial_connections(x, y, conn, conn_x, conn_y, quiet = quiet) 28: ddbs_join(x = points_sf, y = countries_sf, join = "within") 29: eval(expr, envir) 30: eval(expr, envir) 31: withVisible(eval(expr, envir)) 32: withCallingHandlers(code, error = function (e) rlang::entrace(e), message = function (cnd) { watcher$capture_plot_and_output() if (on_message$capture) { watcher$push(cnd) } if (on_message$silence) { invokeRestart("muffleMessage") }}, warning = function (cnd) { if (getOption("warn") >= 2 || getOption("warn") < 0) { return() } watcher$capture_plot_and_output() if (on_warning$capture) { cnd <- sanitize_call(cnd) watcher$push(cnd) } if (on_warning$silence) { invokeRestart("muffleWarning") }}, error = function (cnd) { watcher$capture_plot_and_output() cnd <- sanitize_call(cnd) watcher$push(cnd) switch(on_error, continue = invokeRestart("eval_continue"), stop = invokeRestart("eval_stop"), error = NULL)}) 33: eval(call) 34: eval(call) 35: with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers) 36: doWithOneRestart(return(expr), restart) 37: withOneRestart(expr, restarts[[1L]]) 38: withRestartList(expr, restarts[-nr]) 39: doWithOneRestart(return(expr), restart) 40: withOneRestart(withRestartList(expr, restarts[-nr]), restarts[[nr]]) 41: withRestartList(expr, restarts) 42: withRestarts(with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers), eval_continue = function() TRUE, eval_stop = function() FALSE) 43: evaluate::evaluate(...) 44: evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options)) 45: in_dir(input_dir(), expr) 46: in_input_dir(evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options))) 47: eng_r(options) 48: [39m [31mblock_exec(params) 49: call_block(x) 50: process_group(group) 51: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }) 52: with_options(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }), list(rlang_trace_top_env = knit_global())) 53: xfun:::handle_error(with_options(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }), list(rlang_trace_top_env = knit_global())), function(loc) { setwd(wd) write_utf8(res, output %n% stdout()) paste0("\nQuitting from ", loc, if (!is.null(error)) paste0("\n", rule(), error, "\n", rule()))}, if (labels[i] != "") sprintf(" [%s]", labels[i]), get_loc) 54: process_file(text, output) 55: knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet) 56: rmarkdown::render(input = input, output_format = output_format, knit_root_dir = knit_root_dir, params = params, run_pandoc = FALSE, envir = env) 57: execute(params$input, params$format, params$tempDir, params$libDir, params$dependencies, params$cwd, params$params, params$resourceDir, params$handledLanguages, params$markdown) 58: .main() An irrecoverable exception occurred. R is aborting now ...  [39m [33mWARN: Error encountered when rendering files [39m Error: processing vignette 'spatial_joins.qmd' failed with diagnostics: ! Error running quarto CLI from R. Caused by error: ! Could not parse cli `{}` expression: ` { .__han…`. Caused by error: ! <text>:1:49: unexpected symbol 1: { .__handler_frame__. <- TRUE .__setup_frame__.                                                     ^ --- failed re-building ‘spatial_joins.qmd’ SUMMARY: processing the following files failed:   ‘aw_interpolation.qmd’ ‘duckspatial.qmd’ ‘spatial_joins.qmd’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [18s/18s] OK
• checking HTML version of manual ... [23s/24s] OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 2 ERRORs