* installing *source* package ‘cts’ ...
** this is package ‘cts’ version ‘1.0-24’
** package ‘cts’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 22.1.1 (https://github.com/llvm/llvm-project fef02d48c08db859ef83f84232ed78bd9d1c323a)’
using Fortran compiler: ‘flang version 22.1.1 (https://github.com/llvm/llvm-project fef02d48c08db859ef83f84232ed78bd9d1c323a)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/cts/src'
flang-22 -fpic -O2 -pedantic -c a9rntc.f -o a9rntc.o
flang-22 -fpic -O2 -pedantic -c a9rntd.f -o a9rntd.o
flang-22 -fpic -O2 -pedantic -c a9rnti.f -o a9rnti.o
flang-22 -fpic -O2 -pedantic -c a9rntl.f -o a9rntl.o
flang-22 -fpic -O2 -pedantic -c a9rntr.f -o a9rntr.o
flang-22 -fpic -O2 -pedantic -c balanc.f -o balanc.o
flang-22 -fpic -O2 -pedantic -c balinv.f -o balinv.o
flang-22 -fpic -O2 -pedantic -c cinvert.f -o cinvert.o
flang-22 -fpic -O2 -pedantic -c complete.f -o complete.o
flang-22 -fpic -O2 -pedantic -c cspec.f -o cspec.o
clang-22 -std=gnu23 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang22/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c cts_init.c -o cts_init.o
flang-22 -fpic -O2 -pedantic -c d1mach.f -o d1mach.o
flang-22 -fpic -O2 -pedantic -c d1rply.f -o d1rply.o
flang-22 -fpic -O2 -pedantic -c d2rply.f -o d2rply.o
flang-22 -fpic -O2 -pedantic -c d3rply.f -o d3rply.o
flang-22 -fpic -O2 -pedantic -c d4rply.f -o d4rply.o
./a9rnti.f:46:47: warning: Value of uninitialized local variable 'blank' is used but never defined [-Wused-undefined-variable]
CHARACTER(LEN=1) IFMT1(20), IFMT2(14), BLANK, STAR
^^^^^
./a9rnti.f:46:54: warning: Value of uninitialized local variable 'star' is used but never defined [-Wused-undefined-variable]
CHARACTER(LEN=1) IFMT1(20./a9rntr.f):,49 :I47F: Mwarning: TValue of uninitialized local variable 'blank' is used but never defined [-Wused-undefined-variable]2
( 1 4 ) , B LCAHNAKR,A CSTTEARR(
L E N = 1 ) I F M T 1 ( 2 0 ) , I F M T 2 ( 1 8 ) , B L A N K , S T A R
^ ^ ^ ^
./a9rnti.f : 51 : 16 : warning: Value of uninitialized local variable 'indw' is used but never defined [-Wused-undefined-variable]
I N T E G E R I N D W^,^ ^N^C^O
L,./a9rntr.f :C49O:U54N: Twarning: ,Value of uninitialized local variable 'star' is used but never defined [-Wused-undefined-variable]
I , J , K ,C HIALRIANCET,E RI(LLAESNT=
1 ) I F M T 1 ( 2 0 ) , I^F^M^T^2
(18), BLANK, STAR
^^^^
./a9rntr.f:54:16: warning: Value of uninitialized local variable 'indw' is used but never defined [-Wused-undefined-variable]
INTEGER INDW, NCOL, COUNT, I, J, K, ILINE, ILAST
^^^^
./a9rntc.f:53:47: warning: Value of uninitialized local variable 'blank' is used but never defined [-Wused-undefined-variable]
CHARACTER(LEN=1) IFMT1(20), IFMT2(18), BLANK, STAR
^^^^^
./a9rntc.fflang-22 -fpic -O2 -pedantic -c d5rply.f -o d5rply.o
:53:54: warning: Value of uninitialized local variable 'star' is used but never defined [-Wused-undefined-variable]
CHARACTER(LEN=1) IFMT1(20), IFMT2(18), BLANK, STAR
^^^^
./a9rntc.f:58:16: warning: Value of uninitialized local variable 'indw' is used but never defined [-Wused-undefined-variable]
INTEGER INDW, NCOL, COUNT, I, J, K, ILINE, ILAST
^^^^
./a9rntd.f:48:47: warning: Value of uninitialized local variable 'blank' is used but never defined [-Wused-undefined-variable]
CHARACTER(LEN=1) IFMT1(20), IFMT2(18), BLANK, STAR
^^^^^
./a9rntd.f:48:54: warning: Value of uninitialized local variable 'star' is used but never defined [-Wused-undefined-variable]
CHARACTER(LEN=1) IFMT1(20), IFMT2(18), BLANK, STAR
^^^^
./a9rntd.f:53:16: warning: Value of uninitialized local variable 'indw' is used but never defined [-Wused-undefined-variable]
INTEGER INDW, NCOL, COUNT, I, J, K, ILINE, ILAST
^^^^
./a9rntl.f:44:47: warning: Value of uninitialized local variable 'blank' is used but never defined [-Wused-undefined-variable]
CHARACTER(LEN=1) IFMT1(20), IFMT2(19), BLANK, STAR, TCHAR, FCHAR
^^^^^
./a9rntl.f:44:54: warning: Value of uninitialized local variable 'star' is used but never defined [-Wused-undefined-variable]
CHARACTER(LEN=1) IFMT1(20), IFMT2(19), BLANK, STAR, TCHAR, FCHAR
^^^^
./a9rntl.f:44:60: warning: Value of uninitialized local variable 'tchar' is used but never defined [-Wused-undefined-variable]
CHARACTER(LEN=1) IFMT1(20), IFMT2(19), BLANK, STAR, TCHAR, FCHAR
^^^^^
./a9rntl.f:44:67: warning: Value of uninitialized local variable 'fchar' is used but never defined [-Wused-undefined-variable]
CHARACTER(LEN=1) IFMT1(20), IFMT2(19), BLANK, STAR, TCHAR, FCHAR
^^^^^
./a9rntl.f:50:16: warning: Value of uninitialized local variable 'indw' is used but never defined [-Wused-undefined-variable]
INTEGER INDW, NCOL, COUNT, I, J, K, ILINE, ILAST
^^^^
flang-22 -fpic -O2 -pedantic -c d6rply.f -o d6rply.o
flang-22 -fpic -O2 -pedantic -c d7rply.f -o d7rply.o
flang-22 -fpic -O2 -pedantic -c d8rply.f -o d8rply.o
flang-22 -fpic -O2 -pedantic -c d9rply.f -o d9rply.o
flang-22 -fpic -O2 -pedantic -c display.f -o display.o
flang-22 -fpic -O2 -pedantic -c dpca.f -o dpca.o
flang-22 -fpic -O2 -pedantic -c drpoly.f -o drpoly.o
flang-22 -fpic -O2 -pedantic -c e9rint.f -o e9rint.o
flang-22 -fpic -O2 -pedantic -c envirn.f -o envirn.o
flang-22 -fpic -O2 -pedantic -c eprint.f -o eprint.o
flang-22 -fpic -O2 -pedantic -c fdump.f -o fdump.o
flang-22 -fpic -O2 -pedantic -c forecast.f -o forecast.o
flang-22 -fpic -O2 -pedantic -c frmatd.f -o frmatd.o
flang-22 -fpic -O2 -pedantic -c frmati.f -o frmati.o
flang-22 -fpic -O2 -pedantic -c frmatr.f -o frmatr.o
flang-22 -fpic -O2 -pedantic -c getmin.f -o getmin.o
./envirn.f:45:58: warning: Value of uninitialized local variable 'nout' is used but never defined [-Wused-undefined-variable]
INTEGER GNMIN,GPMIN,I,LBETA,LEMIN,LT,NGNMIN,NGPMIN,NOUT
^^^^
./envirn.f:46:27: warning: Value of local variable 'lrnd' is never used [-Wunused-variable]
LOGICAL FIRST,IWARN,LRND
^^^^
flang-22 -fpic -O2 -pedantic -c hqrort.f -o hqrort.o
flang-22 -fpic -O2 -pedantic -c i0tk00.f -o i0tk00.o
flang-22 -fpic -O2 -pedantic -c i10wid.f -o i10wid.o
flang-22 -fpic -O2 -pedantic -c i1mach.f -o i1mach.o
flang-22 -fpic -O2 -pedantic -c i8save.f -o i8save.o
flang-22 -fpic -O2 -pedantic -c iceil.f -o iceil.o
flang-22 -fpic -O2 -pedantic -c iflr.f -o iflr.o
flang-22 -fpic -O2 -pedantic -c isamax.f -o isamax.o
flang-22 -fpic -O2 -pedantic -c istkgt.f -o istkgt.o
flang-22 -fpic -O2 -pedantic -c istkqu.f -o istkqu.o
flang-22 -fpic -O2 -pedantic -c istkrl.f -o istkrl.o
flang-22 -fpic -O2 -pedantic -c kfilsm.f -o kfilsm.o
flang-22 -fpic -O2 -pedantic -c kfilsm1.f -o kfilsm1.o
./i1mach.f:30:25: warning: Value of uninitialized local variable 't3e' is used but never defined [-Wused-undefined-variable]
INTEGER I3, J, K, T3E(3)
^^^
flang-22 -fpic -O2 -pedantic -c loop.f -o loop.o
flang-22 -fpic -O2 -pedantic -c lybsc.f -o lybsc.o
flang-22 -fpic -O2 -pedantic -c lycsr.f -o lycsr.o
flang-22 -fpic -O2 -pedantic -c mepad.f -o mepad.o
flang-22 -fpic -O2 -pedantic -c mutil.f -o mutil.o
flang-22 -fpic -O2 -pedantic -c newline.f -o newline.o
flang-22 -fpic -O2 -pedantic -c orthes.f -o orthes.o
flang-22 -fpic -O2 -pedantic -c ortran.f -o ortran.o
flang-22 -fpic -O2 -pedantic -c rejuce.f -o rejuce.o
flang-22 -fpic -O2 -pedantic -c repar.f -o repar.o
./mutil.f:3:19: warning: Value of local variable 'i' is never used [-Wunused-variable]
INTEGER N,K,I,J
^
./mutil.f:3:21: warning: Value of local variable 'j' is never used [-Wunused-variable]
INTEGER N,K,I,J
^
flang-22 -fpic -O2 -pedantic -c resg0.f -o resg0.o
flang-22 -fpic -O2 -pedantic -c resg0new.f -o resg0new.o
flang-22 -fpic -O2 -pedantic -c resg1d.f -o resg1d.o
flang-22 -fpic -O2 -pedantic -c resg1dpre.f -o resg1dpre.o
flang-22 -fpic -O2 -pedantic -c resg1dpre1.f -o resg1dpre1.o
flang-22 -fpic -O2 -pedantic -c resgen.f -o resgen.o
flang-22 -fpic -O2 -pedantic -c revg1.f -o revg1.o
flang-22 -fpic -O2 -pedantic -c roots.f -o roots.o
flang-22 -fpic -O2 -pedantic -c s88fmt.f -o s88fmt.o
flang-22 -fpic -O2 -pedantic -c saxpy.f -o saxpy.o
flang-22 -fpic -O2 -pedantic -c sdata.f -o sdata.o
./s88fmt.f:29:24: warning: Value of uninitialized local variable 'digits' is used but never defined [-Wused-undefined-variable]
CHARACTER(LEN=1) DIGITS(10)
^^^^^^
flang-22 -fpic -O2 -pedantic -c sdot.f -o sdot.o
flang-22 -fpic -O2 -pedantic -c sdump.f -o sdump.o
flang-22 -fpic -O2 -pedantic -c search.f -o search.o
flang-22 -fpic -O2 -pedantic -c setcom.f -o setcom.o
flang-22 -fpic -O2 -pedantic -c seterr.f -o seterr.o
flang-22 -fpic -O2 -pedantic -c setfor.f -o setfor.o
flang-22 -fpic -O2 -pedantic -c setkfilsm.f -o setkfilsm.o
flang-22 -fpic -O2 -pedantic -c setup1.f -o setup1.o
flang-22 -fpic -O2 -pedantic -c setupdate.f -o setupdate.o
flang-22 -fpic -O2 -pedantic -c simi.f -o simi.o
flang-22 -fpic -O2 -pedantic -c sscal.f -o sscal.o
flang-22 -fpic -O2 -pedantic -c stkdmp.f -o stkdmp.o
flang-22 -fpic -O2 -pedantic -c store.f -o store.o
flang-22 -fpic -O2 -pedantic -c u9dmp.f -o u9dmp.o
flang-22 -fpic -O2 -pedantic -c update.f -o update.o
clang-22 -std=gnu23 -shared -L/usr/local/clang/lib64 -L/usr/local/clang22/lib -L/usr/local/clang22/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -L/usr/local/clang21/lib/clang/22/lib/x86_64-unknown-linux-gnu -o cts.so a9rntc.o a9rntd.o a9rnti.o a9rntl.o a9rntr.o balanc.o balinv.o cinvert.o complete.o cspec.o cts_init.o d1mach.o d1rply.o d2rply.o d3rply.o d4rply.o d5rply.o d6rply.o d7rply.o d8rply.o d9rply.o display.o dpca.o drpoly.o e9rint.o envirn.o eprint.o fdump.o forecast.o frmatd.o frmati.o frmatr.o getmin.o hqrort.o i0tk00.o i10wid.o i1mach.o i8save.o iceil.o iflr.o isamax.o istkgt.o istkqu.o istkrl.o kfilsm.o kfilsm1.o loop.o lybsc.o lycsr.o mepad.o mutil.o newline.o orthes.o ortran.o rejuce.o repar.o resg0.o resg0new.o resg1d.o resg1dpre.o resg1dpre1.o resgen.o revg1.o roots.o s88fmt.o saxpy.o sdata.o sdot.o sdump.o search.o setcom.o seterr.o setfor.o setkfilsm.o setup1.o setupdate.o simi.o sscal.o stkdmp.o store.o u9dmp.o update.o -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lflang_rt.runtime -lm -lflang_rt.runtime -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/cts/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/cts/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/cts/src'
installing to /data/gannet/ripley/R/packages/tests-clang/cts.Rcheck/00LOCK-cts/00new/cts/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cts)