• using R Under development (unstable) (2026-05-07 r90013)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     clang version 22.1.5 (https://github.com/llvm/llvm-project 5ea218a153f4d2f815b8244eab3e4b4ba5e00e6c)     flang version 22.1.5 (https://github.com/llvm/llvm-project 5ea218a153f4d2f815b8244eab3e4b4ba5e00e6c)
• running under: Fedora Linux 42 (Workstation Edition)
• using session charset: UTF-8 * current time: 2026-05-09 20:24:04 UTC
• using option ‘--no-stop-on-test-error’
• checking for file ‘bit64/DESCRIPTION’ ... OK
• this is package ‘bit64’ version ‘4.8.0’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘bit64’ can be installed ... [22s/57s] OK See the install log for details.
• used C compiler: ‘clang version 22.1.5 (https://github.com/llvm/llvm-project 5ea218a153f4d2f815b8244eab3e4b4ba5e00e6c)’
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking whether startup messages can be suppressed ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [33s/80s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking compilation flags in Makevars ... OK
• checking for GNU extensions in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking use of PKG_*FLAGS in Makefiles ... OK
• checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking examples ... OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [59s/150s] ERROR   Running ‘testthat.R’ [59s/149s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > library(testthat)   > library(patrick)   > library(bit64)    [1mThe assignment of character values to integer64 vectors and matrices with automatic coercion to integer64 will change to a more R consistent behaviour of coercing to character in future versions of bit64. If you wish you can update your code to the new behaviour by setting the option 'bit64.promoteInteger64ToCharacter' to TRUE. [22m      Attaching package: 'bit64'      The following object is masked from 'package:utils':          hashtab      The following objects are masked from 'package:base':          %in%, :, array, as.factor, as.ordered, colSums, factor, intersect,       is.double, is.element, match, matrix, order, rank, rowSums,       setdiff, setequal, table, union      >   > test_check("bit64")   1 000000000000000000000000000000000000000000000000000000000000001   0 111111111111111111111111111111111111111111111111111111111111111       *** caught segfault ***   address 0x5614aa5ff460, cause 'memory not mapped'      Traceback:    1: shellsort.integer64(y, decreasing = decreasing, na.last = na.last)    2: sort_function(y, decreasing = decreasing, na.last = na.last)    3: eval_bare(expr, quo_get_env(quo))    4: quasi_label(enquo(object), label)    5: expect_identical(sort_function(y, decreasing = decreasing, na.last = na.last), n_missing)    6: eval_tidy(code, test_args)    7: eval(code, test_env)    8: eval(code, test_env)    9: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)   10: doTryCatch(return(expr), name, parentenv, handler)   11: tryCatchOne(expr, names, parentenv, handlers[[1L]])   12: tryCatchList(expr, classes, parentenv, handlers)   13: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)   14: doWithOneRestart(return(expr), restart)   15: withOneRestart(expr, restarts[[1L]])   16: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })   17: test_code(code, parent.frame())   18: test_that(completed_desc, eval_tidy(code, test_args))   19: withCallingHandlers(test_that(completed_desc, eval_tidy(code, test_args)), testthat_braces_warning = cnd_muffle)   20: .f(sort_function = .l[[1L]][[i]], na.last = .l[[2L]][[i]], decreasing = .l[[3L]][[i]], duplicates = .l[[4L]][[i]], n_missing = .l[[5L]][[i]], .test_name = .l[[6L]][[i]], ...)   21: .Primitive(".Call")(list(name = "pmap_impl", address = <pointer: 0x5614a2f7ba80>, dll = list(name = "purrr", path = "/data/gannet/ripley/R/test-clang/purrr/libs/purrr.so", dynamicLookup = FALSE, handle = <pointer: 0x5614a57faaf0>, info = <pointer: 0x5614a3a32850>, forceSymbols = FALSE), numParameters = 8L), <environment>, "list", FALSE, 120L, NULL, 5L, c("sort_function", "na.last", "decreasing", "duplicates", "n_missing", ".test_name"), 6L)   22: call_with_cleanup(pmap_impl, environment(), .type, .progress, n, names, i, call_names, call_n)   23: withCallingHandlers(expr, error = function(cnd) { if (i == 0L) { } else { message <- c(i = "In index: {i}.") if (!is.null(names) && !is.na(names[[i]]) && names[[i]] != "") { name <- names[[i]] message <- c(message, i = "With name: {name}.") } else { name <- NULL } cli::cli_abort(message, location = i, name = name, parent = cnd, call = error_call, class = "purrr_error_indexed") }})   24: with_indexed_errors(i = i, names = names, error_call = .purrr_error_call, call_with_cleanup(pmap_impl, environment(), .type, .progress, n, names, i, call_names, call_n))   25: pmap_("list", .l, .f, ..., .progress = .progress)   26: pmap(all_pars, build_and_run_test, desc = desc_stub, code = captured, .interpret_glue = .interpret_glue)   27: with_parameters_test_that("sorting methods for integer64 work", { withr::local_options(list(bit64.warn.exported.s3.method = FALSE)) x = as.integer64(1:10) na_entries = rep(NA_integer64_, n_missing) y = sample(c(x, if (duplicates) x[1L], na_entries)) expect_identical(sort_function(y, decreasing = decreasing, na.last = na.last), n_missing) expected_value = c(if (na.last) integer64() else na_entries, if (duplicates && !decreasing) x[1L], if (decreasing) rev(x) else x, if (duplicates && decreasing) x[1L], if (na.last) na_entries else integer64()) expect_identical(y, expected_value) }, .cases = expand.grid(sort_function = list(bit::mergesort, bit::quicksort, bit::radixsort, bit::ramsort, bit::shellsort), na.last = c(FALSE, TRUE), decreasing = c(FALSE, TRUE), duplicates = c(FALSE, TRUE), n_missing = 0:2))   28: eval(code, test_env)   29: eval(code, test_env)   30: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)   31: doTryCatch(return(expr), name, parentenv, handler)   32: tryCatchOne(expr, names, parentenv, handlers[[1L]])   33: tryCatchList(expr, classes, parentenv, handlers)   34: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)   35: doWithOneRestart(return(expr), restart)   36: withOneRestart(expr, restarts[[1L]])   37: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })   38: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())   39: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)   40: FUN(X[[i]], ...)   41: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)   42: doTryCatch(return(expr), name, parentenv, handler)   43: tryCatchOne(expr, names, parentenv, handlers[[1L]])   44: tryCatchList(expr, classes, parentenv, handlers)   45: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})   46: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))   47: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)   48: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)   49: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")   50: test_check("bit64")   An irrecoverable exception occurred. R is aborting now ...
• checking PDF version of manual ... [16s/37s] OK
• checking HTML version of manual ... [15s/35s] OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 1 ERROR