- using R Under development (unstable) (2025-12-18 r89199)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 21.1.8
flang version 21.1.8
- running under: Fedora Linux 42 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘binsegRcpp/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘binsegRcpp’ version ‘2025.5.13’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘binsegRcpp’ can be installed ... [41s/49s] OK
See the install log for details.
- used C++ compiler: ‘clang version 21.1.8’
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [9s/13s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [15s/20s] ERROR
Running examples in ‘binsegRcpp-Ex.R’ failed
The error most likely occurred in:
> ### Name: get_complexity
> ### Title: get complexity
> ### Aliases: get_complexity
>
> ### ** Examples
>
>
> ## Example 1: empirical=worst case.
> data.vec <- rep(0:1, l=8)
> plot(data.vec)
> worst.model <- binsegRcpp::binseg_normal(data.vec)
> worst.counts <- binsegRcpp::get_complexity(worst.model)
Error in `[.data.table`(iterations, , `:=`(cum.splits, cumsum(splits)), :
attempt access index 4/4 in VECTOR_ELT
Calls: <Anonymous> -> [ -> [.data.table
Execution halted
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [9s/11s] ERROR
Running ‘testthat.R’ [8s/11s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> data.table::setDTthreads(1)
> if(require(testthat))test_check("binsegRcpp")
Loading required package: testthat
Loading required package: binsegRcpp
Saving _problems/test-CRAN-458.R
Saving _problems/test-CRAN-472.R
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 181 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-CRAN.R:458:5'): get_complexity respects min.segment.length ─────
Error in ``[.data.table`(iterations, , `:=`(cum.splits, cumsum(splits)), by = case)`: attempt access index 4/4 in VECTOR_ELT
Backtrace:
▆
1. └─binsegRcpp::get_complexity(fit) at test-CRAN.R:458:5
2. ├─iterations[, `:=`(cum.splits, cumsum(splits)), by = case]
3. └─data.table:::`[.data.table`(...)
── Error ('test-CRAN.R:472:5'): empirical splits not negative ──────────────────
Error in ``[.data.table`(iterations, , `:=`(cum.splits, cumsum(splits)), by = case)`: attempt access index 4/4 in VECTOR_ELT
Backtrace:
▆
1. └─binsegRcpp::get_complexity(fit) at test-CRAN.R:472:5
2. ├─iterations[, `:=`(cum.splits, cumsum(splits)), by = case]
3. └─data.table:::`[.data.table`(...)
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 181 ]
Error:
! Test failures.
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [10s/14s] OK
- checking PDF version of manual ... [8s/10s] OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 2 ERRORs