* installing *source* package ‘apcluster’ ...
** package ‘apcluster’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 18.1.1’
using C++ compiler: ‘clang version 18.1.1’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/apcluster/src'
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c R_init_apcluster.cpp -o R_init_apcluster.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c aggExClusterC.cpp -o aggExClusterC.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c apclusterC.cpp -o apclusterC.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c apclusterLeveragedC.cpp -o apclusterLeveragedC.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c apclusterSparseC.cpp -o apclusterSparseC.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c distanceL.c -o distanceL.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c preferenceRangeC.cpp -o preferenceRangeC.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c preferenceRangeSparseC.cpp -o preferenceRangeSparseC.o
preferenceRangeSparseC.cpp:20:12: warning: unused variable 'j' [-Wunused-variable]
   20 |     int i, j, ii, K,  temp1, temp2, length;
      |            ^
preferenceRangeSparseC.cpp:20:15: warning: unused variable 'ii' [-Wunused-variable]
   20 |     int i, j, ii, K,  temp1, temp2, length;
      |               ^~
preferenceRangeSparseC.cpp:20:19: warning: unused variable 'K' [-Wunused-variable]
   20 |     int i, j, ii, K,  temp1, temp2, length;
      |                   ^
preferenceRangeSparseC.cpp:20:37: warning: unused variable 'length' [-Wunused-variable]
   20 |     int i, j, ii, K,  temp1, temp2, length;
      |                                     ^~~~~~
4 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o apcluster.so R_init_apcluster.o aggExClusterC.o apclusterC.o apclusterLeveragedC.o apclusterSparseC.o distanceL.o preferenceRangeC.o preferenceRangeSparseC.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/apcluster/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/apcluster/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/apcluster/src'
installing to /data/gannet/ripley/R/packages/tests-clang/apcluster.Rcheck/00LOCK-apcluster/00new/apcluster/libs
** R
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for ‘heatmap’ in package ‘apcluster’
Creating a generic function for ‘cutree’ from package ‘stats’ in package ‘apcluster’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (apcluster)